RNA–Protein interactions for RNA: ENST00000622697.4

GABRB3-215, Transcript of gamma-aminobutyric acid type A receptor beta3 subunit, humanhuman

TSL 5 BASIC

Gene GABRB3, Length 5,876 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABRB3-215ENST00000622697 PGPEP1LA6NFU8 196 aa13.55□□□□□ -0.24
GABRB3-215ENST00000622697 MAS1LP35410 378 aa13.55□□□□□ -0.24
GABRB3-215ENST00000622697 GCSAMLQ5JQS6 135 aa13.55□□□□□ -0.24
GABRB3-215ENST00000622697 DOCK8Q8NF50 2099 aa13.55□□□□□ -0.24
GABRB3-215ENST00000622697 LOXL3P58215 753 aa13.55□□□□□ -0.24
GABRB3-215ENST00000622697 ID3Q02535 119 aa13.55□□□□□ -0.24
GABRB3-215ENST00000622697 COL5A1-AS1Q5SY13 56 aa13.55□□□□□ -0.24
GABRB3-215ENST00000622697 GP6Q9HCN6 339 aa13.55□□□□□ -0.24
GABRB3-215ENST00000622697 MRPS18CQ9Y3D5 142 aaKnown RBP13.55□□□□□ -0.24
GABRB3-215ENST00000622697 LEPROTL1O95214 131 aa13.54□□□□□ -0.24
GABRB3-215ENST00000622697 ZNF524Q96C55 264 aa13.54□□□□□ -0.24
GABRB3-215ENST00000622697 KBTBD11-OT1A0A1B0GTJ5 212 aa13.54□□□□□ -0.24
GABRB3-215ENST00000622697 CCL3L1P16619 93 aa13.54□□□□□ -0.24
GABRB3-215ENST00000622697 KIR2DL2P43627 348 aaPredicted RBP13.54□□□□□ -0.24
GABRB3-215ENST00000622697 RPL23P62829 140 aaKnown RBP13.54□□□□□ -0.24
GABRB3-215ENST00000622697 WDR82Q6UXN9 313 aa13.54□□□□□ -0.24
GABRB3-215ENST00000622697 MRPL20Q9BYC9 149 aaKnown RBP13.54□□□□□ -0.24
GABRB3-215ENST00000622697 RNF115Q9Y4L5 304 aa13.54□□□□□ -0.24
GABRB3-215ENST00000622697 IGHV3OR16-10A0A075B7F0 116 aa13.54□□□□□ -0.24
GABRB3-215ENST00000622697 BTF3P20290 206 aaKnown RBP13.54□□□□□ -0.24
GABRB3-215ENST00000622697 CKS2P33552 79 aa13.54□□□□□ -0.24
GABRB3-215ENST00000622697 Q0VFX4 171 aa13.54□□□□□ -0.24
GABRB3-215ENST00000622697 E9PLN8 166 aa13.54□□□□□ -0.24
GABRB3-215ENST00000622697 TCF23Q7RTU1 214 aa13.54□□□□□ -0.24
GABRB3-215ENST00000622697 GPR179Q6PRD1 2367 aa13.53□□□□□ -0.24
GABRB3-215ENST00000622697 LINC00587B1AMM8 73 aa13.53□□□□□ -0.24
GABRB3-215ENST00000622697 QRFPP83859 136 aa13.53□□□□□ -0.24
GABRB3-215ENST00000622697 IFI27L2Q9H2X8 130 aa13.53□□□□□ -0.24
GABRB3-215ENST00000622697 FBXL15Q9H469 300 aa13.53□□□□□ -0.24
GABRB3-215ENST00000622697 VENTXO95231 258 aa13.53□□□□□ -0.24
GABRB3-215ENST00000622697 BSPH1Q075Z2 132 aa13.53□□□□□ -0.24
GABRB3-215ENST00000622697 CLEC7AQ9BXN2 247 aa13.53□□□□□ -0.24
GABRB3-215ENST00000622697 TMEM106BQ9NUM4 274 aa13.53□□□□□ -0.24
GABRB3-215ENST00000622697 NTN3O00634 580 aaPredicted RBP13.53□□□□□ -0.24
GABRB3-215ENST00000622697 MYOZ3Q8TDC0 251 aa13.53□□□□□ -0.24
GABRB3-215ENST00000622697 RBFOX2O43251 390 aaKnown RBP eCLIP13.53□□□□□ -0.24
GABRB3-215ENST00000622697 LILRA1O75019 489 aa13.53□□□□□ -0.24
GABRB3-215ENST00000622697 C1QTNF9P0C862 333 aa13.53□□□□□ -0.24
GABRB3-215ENST00000622697 DPF1Q92782 380 aa13.53□□□□□ -0.24
GABRB3-215ENST00000622697 RALYQ9UKM9 306 aaKnown RBP13.53□□□□□ -0.24
GABRB3-215ENST00000622697 CLDN16Q9Y5I7 305 aa13.53□□□□□ -0.24
GABRB3-215ENST00000622697 SAA2-SAA4A0A096LPE2 208 aa13.52□□□□□ -0.24
GABRB3-215ENST00000622697 IL4P05112 153 aa13.52□□□□□ -0.24
GABRB3-215ENST00000622697 SAA2P0DJI9 122 aaPredicted RBP13.52□□□□□ -0.24
GABRB3-215ENST00000622697 DCAF16Q9NXF7 216 aa13.52□□□□□ -0.24
GABRB3-215ENST00000622697 IGHV3OR16-8A0A075B7F1 116 aa13.52□□□□□ -0.24
GABRB3-215ENST00000622697 ZNF883P0CG24 379 aa13.52□□□□□ -0.24
GABRB3-215ENST00000622697 WNT10AQ9GZT5 417 aa13.52□□□□□ -0.24
GABRB3-215ENST00000622697 MUC21A0A0G2JKD1 596 aa13.52□□□□□ -0.25
GABRB3-215ENST00000622697 MUC21A0A140T8X8 626 aa13.52□□□□□ -0.25
GABRB3-215ENST00000622697 NDUFA2O43678 99 aa13.52□□□□□ -0.25
GABRB3-215ENST00000622697 FAM106CPP0CH98 169 aa13.52□□□□□ -0.25
GABRB3-215ENST00000622697 MUC21Q5SSG8 566 aa13.52□□□□□ -0.25
GABRB3-215ENST00000622697 C16orf92Q96LL3 132 aa13.52□□□□□ -0.25
GABRB3-215ENST00000622697 FER1L5A0AVI2 2057 aa13.52□□□□□ -0.25
GABRB3-215ENST00000622697 THADAQ6YHU6 1953 aa13.52□□□□□ -0.25
GABRB3-215ENST00000622697 FBLL1A6NHQ2 334 aaKnown RBP13.52□□□□□ -0.25
GABRB3-215ENST00000622697 PRB4P10163 310 aaPredicted RBP13.52□□□□□ -0.25
GABRB3-215ENST00000622697 RBPMS2Q6ZRY4 209 aaKnown RBP13.52□□□□□ -0.25
GABRB3-215ENST00000622697 OR4B1Q8NGF8 309 aa13.52□□□□□ -0.25
GABRB3-215ENST00000622697 TMEM171Q8WVE6 324 aa13.52□□□□□ -0.25
GABRB3-215ENST00000622697 E9PQ18 207 aa13.52□□□□□ -0.25
GABRB3-215ENST00000622697 MFAP4P55083 255 aa13.51□□□□□ -0.25
GABRB3-215ENST00000622697 GFRA1P56159 465 aa13.51□□□□□ -0.25
GABRB3-215ENST00000622697 HGFACQ04756 655 aa13.51□□□□□ -0.25
GABRB3-215ENST00000622697 FOXF2Q12947 444 aa13.51□□□□□ -0.25
GABRB3-215ENST00000622697 TMEM78Q5T7P6 136 aa13.51□□□□□ -0.25
GABRB3-215ENST00000622697 HOXA5P20719 270 aa13.51□□□□□ -0.25
GABRB3-215ENST00000622697 OR9G9P0C7N8 305 aa13.51□□□□□ -0.25
GABRB3-215ENST00000622697 PF4V1P10720 104 aa13.51□□□□□ -0.25
GABRB3-215ENST00000622697 A0A087WWC5 75 aa13.51□□□□□ -0.25
GABRB3-215ENST00000622697 CD5P06127 495 aa13.51□□□□□ -0.25
GABRB3-215ENST00000622697 IGHV3-49A0A0A0MS15 119 aa13.5□□□□□ -0.25
GABRB3-215ENST00000622697 MRPL32Q9BYC8 188 aaKnown RBP13.5□□□□□ -0.25
GABRB3-215ENST00000622697 KIAA2026Q5HYC2 2103 aa13.5□□□□□ -0.25
GABRB3-215ENST00000622697 NAPSAO96009 420 aa13.5□□□□□ -0.25
GABRB3-215ENST00000622697 MORN2Q502X0 79 aa13.5□□□□□ -0.25
GABRB3-215ENST00000622697 VOPP1Q96AW1 172 aa13.5□□□□□ -0.25
GABRB3-215ENST00000622697 ABHD17AQ96GS6 310 aa13.5□□□□□ -0.25
GABRB3-215ENST00000622697 IL36BQ9NZH7 164 aa13.5□□□□□ -0.25
GABRB3-215ENST00000622697 ZFP30Q9Y2G7 519 aa13.5□□□□□ -0.25
GABRB3-215ENST00000622697 LOC105371242A0A075B767 164 aa13.5□□□□□ -0.25
GABRB3-215ENST00000622697 IGHV3-66A0A0C4DH42 116 aa13.5□□□□□ -0.25
GABRB3-215ENST00000622697 SRSF9Q13242 221 aaKnown RBP eCLIP13.5□□□□□ -0.25
GABRB3-215ENST00000622697 RNASE7Q9H1E1 156 aaKnown RBP13.5□□□□□ -0.25
GABRB3-215ENST00000622697 SELLP14151 372 aa13.49□□□□□ -0.25
GABRB3-215ENST00000622697 LY6EQ16553 131 aa13.49□□□□□ -0.25
GABRB3-215ENST00000622697 LBHQ53QV2 105 aaPredicted RBP13.49□□□□□ -0.25
GABRB3-215ENST00000622697 ZNF738Q8NE65 137 aa13.49□□□□□ -0.25
GABRB3-215ENST00000622697 NBEAP1P0C6P0 100 aa13.49□□□□□ -0.25
GABRB3-215ENST00000622697 C1orf162Q8NEQ5 155 aaPredicted RBP13.49□□□□□ -0.25
GABRB3-215ENST00000622697 ATG101Q9BSB4 218 aa13.49□□□□□ -0.25
GABRB3-215ENST00000622697 SLC25A33Q9BSK2 321 aa13.49□□□□□ -0.25
GABRB3-215ENST00000622697 C19orf24Q9BVV8 132 aa13.49□□□□□ -0.25
GABRB3-215ENST00000622697 SIAH2O43255 324 aa13.49□□□□□ -0.25
GABRB3-215ENST00000622697 SAA1P0DJI8 122 aaPredicted RBP13.49□□□□□ -0.25
GABRB3-215ENST00000622697 FAM19A2Q8N3H0 131 aa13.49□□□□□ -0.25
GABRB3-215ENST00000622697 ZCCHC14Q8WYQ9 949 aaKnown RBP13.49□□□□□ -0.25
GABRB3-215ENST00000622697 UQCR10Q9UDW1 63 aa13.49□□□□□ -0.25
GABRB3-215ENST00000622697 PSPNO60542 156 aa13.49□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 63.3 ms