RNA–Protein interactions for RNA: ENST00000611132.4

VPS36-207, Transcript of vacuolar protein sorting 36 homolog, humanhuman

TSL 1 (best) BASIC

Gene VPS36, Length 4,607 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS36-207ENST00000611132 GNB4Q9HAV0 340 aa12.29□□□□□ -0.44
VPS36-207ENST00000611132 DEPPQ9NTK1 212 aa12.29□□□□□ -0.44
VPS36-207ENST00000611132 PLA2G2EQ9NZK7 142 aa12.29□□□□□ -0.44
VPS36-207ENST00000611132 GDF9O60383 454 aa12.29□□□□□ -0.44
VPS36-207ENST00000611132 REG1BP48304 166 aa12.29□□□□□ -0.44
VPS36-207ENST00000611132 TBR1Q16650 682 aa12.29□□□□□ -0.44
VPS36-207ENST00000611132 NIT1Q86X76 327 aa12.29□□□□□ -0.44
VPS36-207ENST00000611132 HES7Q9BYE0 225 aa12.29□□□□□ -0.44
VPS36-207ENST00000611132 NOTCH4Q99466 2003 aa12.29□□□□□ -0.44
VPS36-207ENST00000611132 IFNL4K9M1U5 179 aa12.29□□□□□ -0.44
VPS36-207ENST00000611132 FAM214BQ7L5A3 538 aa12.29□□□□□ -0.44
VPS36-207ENST00000611132 CCL17Q92583 94 aa12.29□□□□□ -0.44
VPS36-207ENST00000611132 RPEQ96AT9 228 aa12.29□□□□□ -0.44
VPS36-207ENST00000611132 POLR3KQ9Y2Y1 108 aaPredicted RBP12.29□□□□□ -0.44
VPS36-207ENST00000611132 PATE3B3GLJ2 98 aa12.28□□□□□ -0.44
VPS36-207ENST00000611132 OR2J3O76001 311 aa12.28□□□□□ -0.44
VPS36-207ENST00000611132 TCTAP57738 103 aa12.28□□□□□ -0.44
VPS36-207ENST00000611132 OR10J3Q5JRS4 329 aa12.28□□□□□ -0.44
VPS36-207ENST00000611132 C17orf82Q86X59 251 aaPredicted RBP12.28□□□□□ -0.44
VPS36-207ENST00000611132 RASL11BQ9BPW5 248 aa12.28□□□□□ -0.44
VPS36-207ENST00000611132 TRAV9-2A0A087WT02 112 aa12.28□□□□□ -0.44
VPS36-207ENST00000611132 M0R296 226 aa12.28□□□□□ -0.44
VPS36-207ENST00000611132 CRYABP02511 175 aaKnown RBP12.28□□□□□ -0.44
VPS36-207ENST00000611132 STAG3L2P0CL84 134 aa12.28□□□□□ -0.44
VPS36-207ENST00000611132 STAG3L3P0CL85 134 aa12.28□□□□□ -0.44
VPS36-207ENST00000611132 PLP1P60201 277 aa12.28□□□□□ -0.44
VPS36-207ENST00000611132 C1orf174Q8IYL3 243 aa12.28□□□□□ -0.44
VPS36-207ENST00000611132 LOC389332A0A1B0GUA5 103 aa12.28□□□□□ -0.44
VPS36-207ENST00000611132 ACP7Q6ZNF0 438 aa12.28□□□□□ -0.44
VPS36-207ENST00000611132 PPP1R32Q7Z5V6 425 aa12.28□□□□□ -0.44
VPS36-207ENST00000611132 LPAR2Q9HBW0 351 aa12.28□□□□□ -0.44
VPS36-207ENST00000611132 FBLL1A6NHQ2 334 aaKnown RBP12.28□□□□□ -0.44
VPS36-207ENST00000611132 CLEC3BP05452 202 aa12.28□□□□□ -0.44
VPS36-207ENST00000611132 PAX9P55771 341 aa12.28□□□□□ -0.44
VPS36-207ENST00000611132 SAPCD1Q5SSQ6 148 aa12.28□□□□□ -0.44
VPS36-207ENST00000611132 LYPD6Q86Y78 171 aa12.28□□□□□ -0.44
VPS36-207ENST00000611132 UMODP07911 640 aa12.27□□□□□ -0.44
VPS36-207ENST00000611132 FBLN7Q53RD9 439 aa12.27□□□□□ -0.44
VPS36-207ENST00000611132 FOXL2NBQ6ZUU3 175 aa12.27□□□□□ -0.44
VPS36-207ENST00000611132 TNFRSF19Q9NS68 423 aa12.27□□□□□ -0.44
VPS36-207ENST00000611132 HIGD1AQ9Y241 93 aa12.27□□□□□ -0.44
VPS36-207ENST00000611132 COL4A4P53420 1690 aaPredicted RBP12.27□□□□□ -0.44
VPS36-207ENST00000611132 MYO7BQ6PIF6 2116 aa12.27□□□□□ -0.44
VPS36-207ENST00000611132 TMSB15BA0A087X1C1 80 aa12.27□□□□□ -0.45
VPS36-207ENST00000611132 LOC102723996A0A087X1L8 192 aa12.27□□□□□ -0.45
VPS36-207ENST00000611132 SFTPCP11686 197 aa12.27□□□□□ -0.45
VPS36-207ENST00000611132 FABP2P12104 132 aa12.27□□□□□ -0.45
VPS36-207ENST00000611132 FRMPD3Q5JV73 1810 aa12.27□□□□□ -0.45
VPS36-207ENST00000611132 IGHV3-21A0A0B4J1V1 117 aa12.27□□□□□ -0.45
VPS36-207ENST00000611132 PRRG2O14669 202 aa12.27□□□□□ -0.45
VPS36-207ENST00000611132 OR10AG1Q8NH19 301 aa12.27□□□□□ -0.45
VPS36-207ENST00000611132 ZNF785A8K8V0 405 aa12.26□□□□□ -0.45
VPS36-207ENST00000611132 SMIM12Q96EX1 92 aa12.26□□□□□ -0.45
VPS36-207ENST00000611132 PMCHL2Q9BQD1 86 aa12.26□□□□□ -0.45
VPS36-207ENST00000611132 ZNF703Q9H7S9 590 aaPredicted RBP12.26□□□□□ -0.45
VPS36-207ENST00000611132 RNF115Q9Y4L5 304 aa12.26□□□□□ -0.45
VPS36-207ENST00000611132 APELAP0DMC3 54 aa12.26□□□□□ -0.45
VPS36-207ENST00000611132 EFNB3Q15768 340 aa12.26□□□□□ -0.45
VPS36-207ENST00000611132 DEFB109BQ30KR1 87 aa12.26□□□□□ -0.45
VPS36-207ENST00000611132 FAM222BQ8WU58 562 aa12.26□□□□□ -0.45
VPS36-207ENST00000611132 C20orf144Q9BQM9 153 aa12.26□□□□□ -0.45
VPS36-207ENST00000611132 ZDBF2Q9HCK1 2354 aa12.26□□□□□ -0.45
VPS36-207ENST00000611132 COMPP49747 757 aaPredicted RBP12.26□□□□□ -0.45
VPS36-207ENST00000611132 NPIPB3Q92617 1050 aa12.26□□□□□ -0.45
VPS36-207ENST00000611132 RAB37Q96AX2 223 aa12.26□□□□□ -0.45
VPS36-207ENST00000611132 CCL13Q99616 98 aa12.26□□□□□ -0.45
VPS36-207ENST00000611132 DCTN5Q9BTE1 182 aa12.26□□□□□ -0.45
VPS36-207ENST00000611132 CELA3AP09093 270 aa12.26□□□□□ -0.45
VPS36-207ENST00000611132 PRRX1P54821 245 aa12.26□□□□□ -0.45
VPS36-207ENST00000611132 RBPJQ06330 500 aa12.26□□□□□ -0.45
VPS36-207ENST00000611132 TREML4Q6UXN2 200 aa12.26□□□□□ -0.45
VPS36-207ENST00000611132 SPTA1P02549 2419 aa12.26□□□□□ -0.45
VPS36-207ENST00000611132 DENND4AQ7Z401 1863 aa12.26□□□□□ -0.45
VPS36-207ENST00000611132 COL4A3Q01955 1670 aa12.25□□□□□ -0.45
VPS36-207ENST00000611132 TRBV6-6A0A0A6YYG2 114 aa12.25□□□□□ -0.45
VPS36-207ENST00000611132 GPR6P46095 362 aaPredicted RBP12.25□□□□□ -0.45
VPS36-207ENST00000611132 ARL6IP6Q8N6S5 226 aa12.25□□□□□ -0.45
VPS36-207ENST00000611132 TMEM116Q8NCL8 245 aa12.25□□□□□ -0.45
VPS36-207ENST00000611132 AP5S1Q9NUS5 200 aa12.25□□□□□ -0.45
VPS36-207ENST00000611132 GGTLC1Q9BX51 225 aa12.25□□□□□ -0.45
VPS36-207ENST00000611132 PEX7O00628 323 aa12.25□□□□□ -0.45
VPS36-207ENST00000611132 GATA2P23769 480 aaPredicted RBP12.25□□□□□ -0.45
VPS36-207ENST00000611132 PSG7Q13046 419 aa12.25□□□□□ -0.45
VPS36-207ENST00000611132 KRTCAP3Q53RY4 240 aa12.25□□□□□ -0.45
VPS36-207ENST00000611132 TMEM108Q6UXF1 575 aa12.25□□□□□ -0.45
VPS36-207ENST00000611132 ERASQ7Z444 233 aa12.25□□□□□ -0.45
VPS36-207ENST00000611132 TMEM144Q7Z5S9 345 aa12.25□□□□□ -0.45
VPS36-207ENST00000611132 ITLN1Q8WWA0 313 aa12.25□□□□□ -0.45
VPS36-207ENST00000611132 NEU1Q99519 415 aa12.25□□□□□ -0.45
VPS36-207ENST00000611132 SLC25A10Q9UBX3 287 aaPredicted RBP12.25□□□□□ -0.45
VPS36-207ENST00000611132 TYMSP04818 313 aa12.25□□□□□ -0.45
VPS36-207ENST00000611132 ZNF726P1Q15940 193 aa12.25□□□□□ -0.45
VPS36-207ENST00000611132 PMS2CLQ68D20 193 aa12.25□□□□□ -0.45
VPS36-207ENST00000611132 RAB1CQ92928 201 aa12.25□□□□□ -0.45
VPS36-207ENST00000611132 IFI27L2Q9H2X8 130 aa12.25□□□□□ -0.45
VPS36-207ENST00000611132 ETV2O00321 342 aaPredicted RBP12.24□□□□□ -0.45
VPS36-207ENST00000611132 ARF6P62330 175 aa12.24□□□□□ -0.45
VPS36-207ENST00000611132 SNRNP40Q96DI7 357 aaKnown RBP12.24□□□□□ -0.45
VPS36-207ENST00000611132 IDI2-AS1Q9NZ38 188 aa12.24□□□□□ -0.45
VPS36-207ENST00000611132 FAM157AC9JC47 383 aa12.24□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 99.3 ms