RNA–Protein interactions for RNA: ENST00000606782.1

CTSA-213, Transcript of cathepsin A, humanhuman

TSL 3

Gene CTSA, Length 582 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-213ENST00000606782 A0A1W2PN81 502 aa10.3□□□□□ -0.76
CTSA-213ENST00000606782 KRASP01116 189 aa10.3□□□□□ -0.76
CTSA-213ENST00000606782 LGALS1P09382 135 aaKnown RBP10.3□□□□□ -0.76
CTSA-213ENST00000606782 SAA1P0DJI8 122 aaPredicted RBP10.3□□□□□ -0.76
CTSA-213ENST00000606782 ANXA3P12429 323 aa10.3□□□□□ -0.76
CTSA-213ENST00000606782 CHRNA7P36544 502 aa10.3□□□□□ -0.76
CTSA-213ENST00000606782 PJVKQ0ZLH3 352 aa10.3□□□□□ -0.76
CTSA-213ENST00000606782 PLGLAQ15195 96 aa10.3□□□□□ -0.76
CTSA-213ENST00000606782 PRSS8Q16651 343 aa10.3□□□□□ -0.76
CTSA-213ENST00000606782 ECSCRQ19T08 205 aa10.3□□□□□ -0.76
CTSA-213ENST00000606782 OR4A47Q6IF82 309 aa10.3□□□□□ -0.76
CTSA-213ENST00000606782 OR4A5Q8NH83 315 aa10.3□□□□□ -0.76
CTSA-213ENST00000606782 TMEM167AQ8TBQ9 72 aa10.3□□□□□ -0.76
CTSA-213ENST00000606782 IL22RA2Q969J5 263 aa10.3□□□□□ -0.76
CTSA-213ENST00000606782 WWC2-AS2Q96NR7 200 aa10.3□□□□□ -0.76
CTSA-213ENST00000606782 OR5B12Q96R08 314 aa10.3□□□□□ -0.76
CTSA-213ENST00000606782 PRR25Q96S07 402 aa10.3□□□□□ -0.76
CTSA-213ENST00000606782 MARVELD1Q9BSK0 173 aa10.3□□□□□ -0.76
CTSA-213ENST00000606782 ZNF256Q9Y2P7 627 aaPredicted RBP10.3□□□□□ -0.76
CTSA-213ENST00000606782 MARCH11A6NNE9 402 aa10.29□□□□□ -0.76
CTSA-213ENST00000606782 LINC01619G3V211 115 aa10.29□□□□□ -0.76
CTSA-213ENST00000606782 UPK2O00526 184 aa10.29□□□□□ -0.76
CTSA-213ENST00000606782 OVOL1O14753 267 aa10.29□□□□□ -0.76
CTSA-213ENST00000606782 ATG12O94817 140 aa10.29□□□□□ -0.76
CTSA-213ENST00000606782 KBTBD11O94819 623 aa10.29□□□□□ -0.76
CTSA-213ENST00000606782 BRI3O95415 125 aa10.29□□□□□ -0.76
CTSA-213ENST00000606782 PTTG1O95997 202 aa10.29□□□□□ -0.76
CTSA-213ENST00000606782 IGKV1-5P01602 117 aa10.29□□□□□ -0.76
CTSA-213ENST00000606782 IL5P05113 134 aa10.29□□□□□ -0.76
CTSA-213ENST00000606782 FGF2P09038 288 aa10.29□□□□□ -0.76
CTSA-213ENST00000606782 P0C879 139 aa10.29□□□□□ -0.76
CTSA-213ENST00000606782 SPNP16150 400 aa10.29□□□□□ -0.76
CTSA-213ENST00000606782 G6PCP35575 357 aa10.29□□□□□ -0.76
CTSA-213ENST00000606782 SSBP2P81877 361 aaPredicted RBP10.29□□□□□ -0.76
CTSA-213ENST00000606782 DHRS2Q13268 280 aa10.29□□□□□ -0.76
CTSA-213ENST00000606782 ANKRD55Q3KP44 614 aa10.29□□□□□ -0.76
CTSA-213ENST00000606782 PLET1Q6UQ28 207 aa10.29□□□□□ -0.76
CTSA-213ENST00000606782 UNQ5815/PRO19632Q6UWF5 114 aa10.29□□□□□ -0.76
CTSA-213ENST00000606782 SSX9Q7RTT3 188 aa10.29□□□□□ -0.76
CTSA-213ENST00000606782 LYG2Q86SG7 212 aa10.29□□□□□ -0.76
CTSA-213ENST00000606782 LRTM2Q8N967 370 aa10.29□□□□□ -0.76
CTSA-213ENST00000606782 LFNGQ8NES3 379 aa10.29□□□□□ -0.76
CTSA-213ENST00000606782 DMBX1Q8NFW5 382 aa10.29□□□□□ -0.76
CTSA-213ENST00000606782 DLX4Q92988 240 aaPredicted RBP10.29□□□□□ -0.76
CTSA-213ENST00000606782 CLCC1Q96S66 551 aa10.29□□□□□ -0.76
CTSA-213ENST00000606782 SLA2Q9H6Q3 261 aa10.29□□□□□ -0.76
CTSA-213ENST00000606782 ZNF430Q9H8G1 570 aaPredicted RBP10.29□□□□□ -0.76
CTSA-213ENST00000606782 TMEM140Q9NV12 185 aa10.29□□□□□ -0.76
CTSA-213ENST00000606782 TRAV3A0A0B4J244 114 aa10.28□□□□□ -0.76
CTSA-213ENST00000606782 INMT-MINDY4F8WBC2 141 aa10.28□□□□□ -0.76
CTSA-213ENST00000606782 CA2P00918 260 aa10.28□□□□□ -0.76
CTSA-213ENST00000606782 MAS1LP35410 378 aa10.28□□□□□ -0.76
CTSA-213ENST00000606782 ERVK-16P61578 105 aa10.28□□□□□ -0.76
CTSA-213ENST00000606782 SRPXP78539 464 aa10.28□□□□□ -0.76
CTSA-213ENST00000606782 TRIM16LQ309B1 348 aa10.28□□□□□ -0.76
CTSA-213ENST00000606782 TMEM268Q5VZI3 342 aa10.28□□□□□ -0.76
CTSA-213ENST00000606782 ACSM6Q6P461 480 aa10.28□□□□□ -0.76
CTSA-213ENST00000606782 MMD2Q8IY49 270 aa10.28□□□□□ -0.76
CTSA-213ENST00000606782 LGI3Q8N145 548 aa10.28□□□□□ -0.76
CTSA-213ENST00000606782 RBPMSQ93062 196 aaKnown RBP10.28□□□□□ -0.76
CTSA-213ENST00000606782 FAM103A1Q9BTL3 118 aaKnown RBP10.28□□□□□ -0.76
CTSA-213ENST00000606782 PRR13Q9NZ81 148 aa10.28□□□□□ -0.76
CTSA-213ENST00000606782 IGHV4OR15-8A0A075B7B6 117 aa10.27□□□□□ -0.77
CTSA-213ENST00000606782 A0A087WW49 117 aa10.27□□□□□ -0.77
CTSA-213ENST00000606782 A0A0B4J2A0 478 aa10.27□□□□□ -0.77
CTSA-213ENST00000606782 PIGBOS1A0A0B4J2F0 54 aa10.27□□□□□ -0.77
CTSA-213ENST00000606782 H3BUA1 57 aa10.27□□□□□ -0.77
CTSA-213ENST00000606782 HLA-AP01891 365 aaKnown RBP10.27□□□□□ -0.77
CTSA-213ENST00000606782 HSPB1P04792 205 aaKnown RBP10.27□□□□□ -0.77
CTSA-213ENST00000606782 OR9G9P0C7N8 305 aa10.27□□□□□ -0.77
CTSA-213ENST00000606782 VAMP1P23763 118 aa10.27□□□□□ -0.77
CTSA-213ENST00000606782 FXYD3Q14802 87 aa10.27□□□□□ -0.77
CTSA-213ENST00000606782 C4orf46Q504U0 113 aa10.27□□□□□ -0.77
CTSA-213ENST00000606782 H2BFWTQ7Z2G1 175 aa10.27□□□□□ -0.77
CTSA-213ENST00000606782 LYZL2Q7Z4W2 148 aa10.27□□□□□ -0.77
CTSA-213ENST00000606782 FAM219AQ8IW50 185 aa10.27□□□□□ -0.77
CTSA-213ENST00000606782 ABHD5Q8WTS1 349 aa10.27□□□□□ -0.77
CTSA-213ENST00000606782 CASTOR1Q8WTX7 329 aa10.27□□□□□ -0.77
CTSA-213ENST00000606782 ARPC1AQ92747 370 aa10.27□□□□□ -0.77
CTSA-213ENST00000606782 LSM10Q969L4 123 aaKnown RBP10.27□□□□□ -0.77
CTSA-213ENST00000606782 TMEM68Q96MH6 324 aa10.27□□□□□ -0.77
CTSA-213ENST00000606782 SHPKQ9UHJ6 478 aa10.27□□□□□ -0.77
CTSA-213ENST00000606782 U3KQK5 164 aa10.27□□□□□ -0.77
CTSA-213ENST00000606782 A0A0B4J293 547 aa10.26□□□□□ -0.77
CTSA-213ENST00000606782 CREBL2O60519 120 aaPredicted RBP10.26□□□□□ -0.77
CTSA-213ENST00000606782 SLURP1P55000 103 aa10.26□□□□□ -0.77
CTSA-213ENST00000606782 RPL8P62917 257 aaKnown RBP10.26□□□□□ -0.77
CTSA-213ENST00000606782 RGS21Q2M5E4 152 aa10.26□□□□□ -0.77
CTSA-213ENST00000606782 Q6ZRM9 215 aa10.26□□□□□ -0.77
CTSA-213ENST00000606782 OR52B4Q8NGK2 314 aa10.26□□□□□ -0.77
CTSA-213ENST00000606782 ZNF431Q8TF32 576 aaPredicted RBP10.26□□□□□ -0.77
CTSA-213ENST00000606782 MITD1Q8WV92 249 aa10.26□□□□□ -0.77
CTSA-213ENST00000606782 GPR146Q96CH1 333 aa10.26□□□□□ -0.77
CTSA-213ENST00000606782 A0A0G2JRQ6 117 aa10.25□□□□□ -0.77
CTSA-213ENST00000606782 TEX50A0A1B0GTY4 177 aa10.25□□□□□ -0.77
CTSA-213ENST00000606782 DUXBA0A1W2PPF3 345 aa10.25□□□□□ -0.77
CTSA-213ENST00000606782 PRAF2O60831 178 aa10.25□□□□□ -0.77
CTSA-213ENST00000606782 SAP30O75446 220 aa10.25□□□□□ -0.77
CTSA-213ENST00000606782 SNAPC5O75971 98 aa10.25□□□□□ -0.77
CTSA-213ENST00000606782 CNIH1O95406 144 aa10.25□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 63.3 ms