RNA–Protein interactions for RNA: ENST00000600888.2

CKS1BP3-201, Transcript of CDC28 protein kinase regulatory subunit 1B pseudogene 3, humanhuman

BASIC

Gene CKS1BP3, Length 237 nt, Biotype processed pseudogene, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1BP3-201ENST00000600888 OR2W3Q7Z3T1 314 aa2.62□□□□□ -1.99
CKS1BP3-201ENST00000600888 TGIF2LXQ8IUE1 241 aa2.62□□□□□ -1.99
CKS1BP3-201ENST00000600888 LINC00518Q8N0U6 118 aa2.62□□□□□ -1.99
CKS1BP3-201ENST00000600888 JAGN1Q8N5M9 183 aa2.62□□□□□ -1.99
CKS1BP3-201ENST00000600888 COMMD1Q8N668 190 aa2.62□□□□□ -1.99
CKS1BP3-201ENST00000600888 Q8N6K4 173 aa2.62□□□□□ -1.99
CKS1BP3-201ENST00000600888 C5orf56Q8N8D9 126 aa2.62□□□□□ -1.99
CKS1BP3-201ENST00000600888 TMEM104Q8NE00 496 aa2.62□□□□□ -1.99
CKS1BP3-201ENST00000600888 OR5AU1Q8NGC0 362 aa2.62□□□□□ -1.99
CKS1BP3-201ENST00000600888 OR4X2Q8NGF9 303 aa2.62□□□□□ -1.99
CKS1BP3-201ENST00000600888 OR10X1Q8NGY0 326 aa2.62□□□□□ -1.99
CKS1BP3-201ENST00000600888 OR2T10Q8NGZ9 312 aa2.62□□□□□ -1.99
CKS1BP3-201ENST00000600888 RFESDQ8TAC1 157 aa2.62□□□□□ -1.99
CKS1BP3-201ENST00000600888 KCNG3Q8TAE7 436 aa2.62□□□□□ -1.99
CKS1BP3-201ENST00000600888 RNASE8Q8TDE3 154 aaKnown RBP2.62□□□□□ -1.99
CKS1BP3-201ENST00000600888 CAPSLQ8WWF8 208 aa2.62□□□□□ -1.99
CKS1BP3-201ENST00000600888 RTN4IP1Q8WWV3 396 aaPredicted RBP2.62□□□□□ -1.99
CKS1BP3-201ENST00000600888 ARL11Q969Q4 196 aa2.62□□□□□ -1.99
CKS1BP3-201ENST00000600888 YPEL2Q96QA6 119 aa2.62□□□□□ -1.99
CKS1BP3-201ENST00000600888 OR5M11Q96RB7 305 aa2.62□□□□□ -1.99
CKS1BP3-201ENST00000600888 ST6GALNAC5Q9BVH7 336 aa2.62□□□□□ -1.99
CKS1BP3-201ENST00000600888 TMEM59Q9BXS4 323 aa2.62□□□□□ -1.99
CKS1BP3-201ENST00000600888 SELENOIQ9C0D9 397 aa2.62□□□□□ -1.99
CKS1BP3-201ENST00000600888 SLC5A7Q9GZV3 580 aa2.62□□□□□ -1.99
CKS1BP3-201ENST00000600888 VCX3BQ9H321 246 aa2.62□□□□□ -1.99
CKS1BP3-201ENST00000600888 JPT1Q9UK76 154 aa2.62□□□□□ -1.99
CKS1BP3-201ENST00000600888 TRAPPC2LQ9UL33 140 aa2.62□□□□□ -1.99
CKS1BP3-201ENST00000600888 RAB26Q9ULW5 256 aa2.62□□□□□ -1.99
CKS1BP3-201ENST00000600888 TSSC4Q9Y5U2 329 aaPredicted RBP2.62□□□□□ -1.99
CKS1BP3-201ENST00000600888 PEX16Q9Y5Y5 336 aa2.62□□□□□ -1.99
CKS1BP3-201ENST00000600888 TRAV1-2A0A0B4J238 106 aa2.61□□□□□ -1.99
CKS1BP3-201ENST00000600888 TRAV39A0A0B4J263 110 aa2.61□□□□□ -1.99
CKS1BP3-201ENST00000600888 PNMA8CA0A1B0GUJ8 204 aa2.61□□□□□ -1.99
CKS1BP3-201ENST00000600888 C5orf51A6NDU8 294 aa2.61□□□□□ -1.99
CKS1BP3-201ENST00000600888 ANKRD65E5RJM6 399 aa2.61□□□□□ -1.99
CKS1BP3-201ENST00000600888 SDCBPO00560 298 aaPredicted RBP2.61□□□□□ -1.99
CKS1BP3-201ENST00000600888 SLC17A2O00624 439 aa2.61□□□□□ -1.99
CKS1BP3-201ENST00000600888 CRTAPO75718 401 aaPredicted RBP2.61□□□□□ -1.99
CKS1BP3-201ENST00000600888 DIRAS3O95661 229 aa2.61□□□□□ -1.99
CKS1BP3-201ENST00000600888 MOSP00540 346 aa2.61□□□□□ -1.99
CKS1BP3-201ENST00000600888 IGKV1D-33P01593 117 aa2.61□□□□□ -1.99
CKS1BP3-201ENST00000600888 IGKV1-33P01594 117 aa2.61□□□□□ -1.99
CKS1BP3-201ENST00000600888 HBZP02008 142 aa2.61□□□□□ -1.99
CKS1BP3-201ENST00000600888 IGF1P05019 195 aa2.61□□□□□ -1.99
CKS1BP3-201ENST00000600888 RCC1P18754 421 aaPredicted RBP2.61□□□□□ -1.99
CKS1BP3-201ENST00000600888 AZU1P20160 251 aa2.61□□□□□ -1.99
CKS1BP3-201ENST00000600888 CD24P25063 80 aa2.61□□□□□ -1.99
CKS1BP3-201ENST00000600888 HTR2CP28335 458 aa2.61□□□□□ -1.99
CKS1BP3-201ENST00000600888 GNG10P50151 68 aa2.61□□□□□ -1.99
CKS1BP3-201ENST00000600888 GABARAPL2P60520 117 aa2.61□□□□□ -1.99
CKS1BP3-201ENST00000600888 HERV-K104P63124 156 aa2.61□□□□□ -1.99
CKS1BP3-201ENST00000600888 UNC119Q13432 240 aa2.61□□□□□ -1.99
CKS1BP3-201ENST00000600888 INSL4Q14641 139 aa2.61□□□□□ -1.99
CKS1BP3-201ENST00000600888 HMGN3Q15651 99 aa2.61□□□□□ -1.99
CKS1BP3-201ENST00000600888 CT45A1Q5HYN5 189 aa2.61□□□□□ -1.99
CKS1BP3-201ENST00000600888 LCE3EQ5T5B0 92 aa2.61□□□□□ -1.99
CKS1BP3-201ENST00000600888 FAM27D1Q5T7N8 215 aa2.61□□□□□ -1.99
CKS1BP3-201ENST00000600888 LIPKQ5VXJ0 399 aa2.61□□□□□ -1.99
CKS1BP3-201ENST00000600888 STEAP1BQ6NZ63 245 aa2.61□□□□□ -1.99
CKS1BP3-201ENST00000600888 ZNF833PQ6ZTB9 187 aa2.61□□□□□ -1.99
CKS1BP3-201ENST00000600888 MOB1BQ7L9L4 216 aa2.61□□□□□ -1.99
CKS1BP3-201ENST00000600888 FAM71E2Q8N5Q1 922 aa2.61□□□□□ -1.99
CKS1BP3-201ENST00000600888 DRAM1Q8N682 238 aa2.61□□□□□ -1.99
CKS1BP3-201ENST00000600888 Q8N9W7 124 aa2.61□□□□□ -1.99
CKS1BP3-201ENST00000600888 OR4K15Q8NH41 348 aa2.61□□□□□ -1.99
CKS1BP3-201ENST00000600888 OR56B4Q8NH76 319 aa2.61□□□□□ -1.99
CKS1BP3-201ENST00000600888 CT45A3Q8NHU0 189 aa2.61□□□□□ -1.99
CKS1BP3-201ENST00000600888 MRPL30Q8TCC3 161 aaKnown RBP2.61□□□□□ -1.99
CKS1BP3-201ENST00000600888 NEK7Q8TDX7 302 aa2.61□□□□□ -1.99
CKS1BP3-201ENST00000600888 UFD1Q92890 307 aa2.61□□□□□ -1.99
CKS1BP3-201ENST00000600888 LEAP2Q969E1 77 aa2.61□□□□□ -1.99
CKS1BP3-201ENST00000600888 GALMQ96C23 342 aa2.61□□□□□ -1.99
CKS1BP3-201ENST00000600888 C5orf30Q96GV9 206 aa2.61□□□□□ -1.99
CKS1BP3-201ENST00000600888 MGLLQ99685 303 aa2.61□□□□□ -1.99
CKS1BP3-201ENST00000600888 SULT4A1Q9BR01 284 aa2.61□□□□□ -1.99
CKS1BP3-201ENST00000600888 ZNF251Q9BRH9 671 aa2.61□□□□□ -1.99
CKS1BP3-201ENST00000600888 TMED9Q9BVK6 235 aa2.61□□□□□ -1.99
CKS1BP3-201ENST00000600888 FUNDC2Q9BWH2 189 aa2.61□□□□□ -1.99
CKS1BP3-201ENST00000600888 GON7Q9BXV9 100 aa2.61□□□□□ -1.99
CKS1BP3-201ENST00000600888 YTHDF1Q9BYJ9 559 aaKnown RBP2.61□□□□□ -1.99
CKS1BP3-201ENST00000600888 TOLLIPQ9H0E2 274 aa2.61□□□□□ -1.99
CKS1BP3-201ENST00000600888 LPAR5Q9H1C0 372 aa2.61□□□□□ -1.99
CKS1BP3-201ENST00000600888 ABCG5Q9H222 651 aa2.61□□□□□ -1.99
CKS1BP3-201ENST00000600888 BANF2Q9H503 90 aa2.61□□□□□ -1.99
CKS1BP3-201ENST00000600888 TAF9BQ9HBM6 251 aa2.61□□□□□ -1.99
CKS1BP3-201ENST00000600888 ACOT13Q9NPJ3 140 aa2.61□□□□□ -1.99
CKS1BP3-201ENST00000600888 PLSCR3Q9NRY6 295 aa2.61□□□□□ -1.99
CKS1BP3-201ENST00000600888 KCNIP1Q9NZI2 227 aa2.61□□□□□ -1.99
CKS1BP3-201ENST00000600888 PIPOXQ9P0Z9 390 aa2.61□□□□□ -1.99
CKS1BP3-201ENST00000600888 GNG12Q9UBI6 72 aa2.61□□□□□ -1.99
CKS1BP3-201ENST00000600888 BLOC1S6Q9UL45 172 aa2.61□□□□□ -1.99
CKS1BP3-201ENST00000600888 KIF25-AS1Q9Y6Z4 181 aa2.61□□□□□ -1.99
CKS1BP3-201ENST00000600888 COL7A1Q02388 2944 aa2.61□□□□□ -1.99
CKS1BP3-201ENST00000600888 A0A0A6YYD4 124 aa2.6□□□□□ -1.99
CKS1BP3-201ENST00000600888 IGHV3-43A0A0B4J1X8 118 aa2.6□□□□□ -1.99
CKS1BP3-201ENST00000600888 TRDV1A0A1B0GX56 115 aa2.6□□□□□ -1.99
CKS1BP3-201ENST00000600888 A0A1W2PPE3 182 aa2.6□□□□□ -1.99
CKS1BP3-201ENST00000600888 TCRBV4S1A1TA0A5B7 111 aa2.6□□□□□ -1.99
CKS1BP3-201ENST00000600888 PSMB11A5LHX3 300 aa2.6□□□□□ -1.99
CKS1BP3-201ENST00000600888 SERPINE3A8MV23 424 aa2.6□□□□□ -1.99
Retrieved 100 of 20,778 RNA–protein pairs in 54.7 ms