RNA–Protein interactions for RNA: ENST00000593946.5

PNKP-203, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 1 (best)

Gene PNKP, Length 1,723 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-203ENST00000593946 HINT2Q9BX68 163 aa16.62■□□□□ 0.25
PNKP-203ENST00000593946 PLEKHA3Q9HB20 300 aa16.62■□□□□ 0.25
PNKP-203ENST00000593946 WFDC1Q9HC57 220 aa16.62■□□□□ 0.25
PNKP-203ENST00000593946 A0A0U1RQK1 487 aa16.61■□□□□ 0.25
PNKP-203ENST00000593946 C15orf62A8K5M9 175 aa16.61■□□□□ 0.25
PNKP-203ENST00000593946 FAM106CPP0CH98 169 aa16.61■□□□□ 0.25
PNKP-203ENST00000593946 MAS1LP35410 378 aa16.61■□□□□ 0.25
PNKP-203ENST00000593946 DYNLT3P51808 116 aa16.61■□□□□ 0.25
PNKP-203ENST00000593946 C10orf55Q5SWW7 151 aa16.61■□□□□ 0.25
PNKP-203ENST00000593946 CIARTQ8N365 385 aaPredicted RBP16.61■□□□□ 0.25
PNKP-203ENST00000593946 MEGF9Q9H1U4 602 aa16.61■□□□□ 0.25
PNKP-203ENST00000593946 ENY2Q9NPA8 101 aa16.61■□□□□ 0.25
PNKP-203ENST00000593946 CGB1A6NKQ9 187 aa16.6■□□□□ 0.25
PNKP-203ENST00000593946 E7EUB6 86 aa16.6■□□□□ 0.25
PNKP-203ENST00000593946 IFNA7P01567 189 aa16.6■□□□□ 0.25
PNKP-203ENST00000593946 ARL16Q0P5N6 197 aa16.6■□□□□ 0.25
PNKP-203ENST00000593946 FAM120AOSQ5T036 256 aa16.6■□□□□ 0.25
PNKP-203ENST00000593946 KIAA1456Q9P272 454 aa16.6■□□□□ 0.25
PNKP-203ENST00000593946 PMS2P5A8MQ11 134 aa16.59■□□□□ 0.25
PNKP-203ENST00000593946 INS-IGF2F8WCM5 200 aa16.59■□□□□ 0.25
PNKP-203ENST00000593946 JTBO76095 146 aa16.59■□□□□ 0.25
PNKP-203ENST00000593946 TPT1P13693 172 aaKnown RBP16.59■□□□□ 0.25
PNKP-203ENST00000593946 TMEM11P17152 192 aa16.59■□□□□ 0.25
PNKP-203ENST00000593946 CLINT1Q14677 625 aa16.59■□□□□ 0.25
PNKP-203ENST00000593946 UBAC2Q8NBM4 344 aa16.59■□□□□ 0.25
PNKP-203ENST00000593946 OR1S2Q8NGQ3 325 aa16.59■□□□□ 0.25
PNKP-203ENST00000593946 A0A1B0GW64 132 aa16.59■□□□□ 0.25
PNKP-203ENST00000593946 MYO9AB2RTY4 2548 aa16.59■□□□□ 0.25
PNKP-203ENST00000593946 COMPP49747 757 aaPredicted RBP16.59■□□□□ 0.25
PNKP-203ENST00000593946 BPIFB3P59826 476 aa16.59■□□□□ 0.25
PNKP-203ENST00000593946 HBG1P69891 147 aa16.59■□□□□ 0.25
PNKP-203ENST00000593946 HBG2P69892 147 aa16.59■□□□□ 0.25
PNKP-203ENST00000593946 RPP30P78346 268 aaKnown RBP16.59■□□□□ 0.25
PNKP-203ENST00000593946 SSBP2P81877 361 aaPredicted RBP16.59■□□□□ 0.25
PNKP-203ENST00000593946 PLGLAQ15195 96 aa16.59■□□□□ 0.25
PNKP-203ENST00000593946 C5orf64Q2M2E5 130 aa16.59■□□□□ 0.25
PNKP-203ENST00000593946 BAP18Q8IXM2 172 aa16.59■□□□□ 0.25
PNKP-203ENST00000593946 OR10W1Q8NGF6 305 aa16.59■□□□□ 0.25
PNKP-203ENST00000593946 TLN2Q9Y4G6 2542 aa16.58■□□□□ 0.25
PNKP-203ENST00000593946 AKAP9Q99996 3911 aa16.58■□□□□ 0.24
PNKP-203ENST00000593946 FCN1O00602 326 aa16.58■□□□□ 0.24
PNKP-203ENST00000593946 ACTL6BO94805 426 aa16.58■□□□□ 0.24
PNKP-203ENST00000593946 FSHBP01225 129 aa16.58■□□□□ 0.24
PNKP-203ENST00000593946 IFNA10P01566 189 aa16.58■□□□□ 0.24
PNKP-203ENST00000593946 TNXAQ16473 311 aa16.58■□□□□ 0.24
PNKP-203ENST00000593946 TMEM170AQ8WVE7 144 aa16.58■□□□□ 0.24
PNKP-203ENST00000593946 PHYHIPLQ96FC7 376 aa16.58■□□□□ 0.24
PNKP-203ENST00000593946 FAM96BQ9Y3D0 163 aa16.58■□□□□ 0.24
PNKP-203ENST00000593946 A0A1W2PN81 502 aa16.57■□□□□ 0.24
PNKP-203ENST00000593946 CHRNA7P36544 502 aa16.57■□□□□ 0.24
PNKP-203ENST00000593946 EIF5AP63241 154 aaKnown RBP16.57■□□□□ 0.24
PNKP-203ENST00000593946 OR8G2PQ6IF36 304 aa16.57■□□□□ 0.24
PNKP-203ENST00000593946 ALKAL2Q6UX46 152 aa16.57■□□□□ 0.24
PNKP-203ENST00000593946 SLC24A4Q8NFF2 622 aa16.57■□□□□ 0.24
PNKP-203ENST00000593946 ATP5SQ99766 215 aa16.57■□□□□ 0.24
PNKP-203ENST00000593946 SOX21Q9Y651 276 aaPredicted RBP16.57■□□□□ 0.24
PNKP-203ENST00000593946 BORCS7-ASMTA0A0B4J1R7 106 aa16.56■□□□□ 0.24
PNKP-203ENST00000593946 SCAF4O95104 1147 aaKnown RBP16.56■□□□□ 0.24
PNKP-203ENST00000593946 FBP1P09467 338 aa16.56■□□□□ 0.24
PNKP-203ENST00000593946 RPL27AP46776 148 aaKnown RBP16.56■□□□□ 0.24
PNKP-203ENST00000593946 ZNF266Q14584 549 aa16.56■□□□□ 0.24
PNKP-203ENST00000593946 BSXQ3C1V8 233 aa16.56■□□□□ 0.24
PNKP-203ENST00000593946 PIFOQ8TCI5 191 aa16.56■□□□□ 0.24
PNKP-203ENST00000593946 ARV1Q9H2C2 271 aa16.56■□□□□ 0.24
PNKP-203ENST00000593946 UBQLN2Q9UHD9 624 aa16.56■□□□□ 0.24
PNKP-203ENST00000593946 CA2P00918 260 aa16.56■□□□□ 0.24
PNKP-203ENST00000593946 NPY1RP25929 384 aa16.56■□□□□ 0.24
PNKP-203ENST00000593946 SLC38A11Q08AI6 406 aa16.56■□□□□ 0.24
PNKP-203ENST00000593946 NCBP2LA6PVI3 153 aaKnown RBP16.55■□□□□ 0.24
PNKP-203ENST00000593946 DFFBO76075 338 aa16.55■□□□□ 0.24
PNKP-203ENST00000593946 OR8U8P0C7N1 319 aa16.55■□□□□ 0.24
PNKP-203ENST00000593946 HTR2BP41595 481 aa16.55■□□□□ 0.24
PNKP-203ENST00000593946 GNB1P62873 340 aa16.55■□□□□ 0.24
PNKP-203ENST00000593946 WT1-ASQ06250 92 aa16.55■□□□□ 0.24
PNKP-203ENST00000593946 OR10P1Q8NGE3 313 aa16.55■□□□□ 0.24
PNKP-203ENST00000593946 SCARB1Q8WTV0 552 aa16.55■□□□□ 0.24
PNKP-203ENST00000593946 C1RLQ9NZP8 487 aa16.55■□□□□ 0.24
PNKP-203ENST00000593946 NOTCH2Q04721 2471 aa16.55■□□□□ 0.24
PNKP-203ENST00000593946 SMAD7O15105 426 aaKnown RBP16.54■□□□□ 0.24
PNKP-203ENST00000593946 ATP5IP56385 69 aaPredicted RBP16.54■□□□□ 0.24
PNKP-203ENST00000593946 LILRB2Q8N423 598 aa16.54■□□□□ 0.24
PNKP-203ENST00000593946 Q8N9W7 124 aa16.54■□□□□ 0.24
PNKP-203ENST00000593946 NANPQ8TBE9 248 aa16.54■□□□□ 0.24
PNKP-203ENST00000593946 SRSF12Q8WXF0 261 aaKnown RBP16.54■□□□□ 0.24
PNKP-203ENST00000593946 PINX1Q96BK5 328 aaKnown RBP16.54■□□□□ 0.24
PNKP-203ENST00000593946 MXRA5Q9NR99 2828 aa16.54■□□□□ 0.24
PNKP-203ENST00000593946 ZFHX3Q15911 3703 aa16.54■□□□□ 0.24
PNKP-203ENST00000593946 IGLC7A0M8Q6 106 aa16.53■□□□□ 0.24
PNKP-203ENST00000593946 PRSS46E5RG02 174 aa16.53■□□□□ 0.24
PNKP-203ENST00000593946 RNASE2P10153 161 aaKnown RBP16.53■□□□□ 0.24
PNKP-203ENST00000593946 RAB11AP62491 216 aa16.53■□□□□ 0.24
PNKP-203ENST00000593946 ERHP84090 104 aaKnown RBP16.53■□□□□ 0.24
PNKP-203ENST00000593946 LRRC75BQ2VPJ9 315 aa16.53■□□□□ 0.24
PNKP-203ENST00000593946 C2orf83Q53S99 150 aa16.53■□□□□ 0.24
PNKP-203ENST00000593946 SSX3Q99909 188 aa16.53■□□□□ 0.24
PNKP-203ENST00000593946 GINS3Q9BRX5 216 aa16.53■□□□□ 0.24
PNKP-203ENST00000593946 TEX22C9J3V5 150 aa16.53■□□□□ 0.24
PNKP-203ENST00000593946 AANATQ16613 207 aa16.53■□□□□ 0.24
PNKP-203ENST00000593946 ETV3LQ6ZN32 361 aa16.53■□□□□ 0.24
PNKP-203ENST00000593946 ACANP16112 2415 aa16.52■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 145.4 ms