RNA–Protein interactions for RNA: ENST00000583988.1

PPP4R1-227, Transcript of protein phosphatase 4 regulatory subunit 1, humanhuman

TSL 3

Gene PPP4R1, Length 582 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R1-227ENST00000583988 DCCP43146 1447 aa1.13□□□□□ -2.23
PPP4R1-227ENST00000583988 PLB1Q6P1J6 1458 aa1.12□□□□□ -2.23
PPP4R1-227ENST00000583988 KIAA2026Q5HYC2 2103 aa1.12□□□□□ -2.23
PPP4R1-227ENST00000583988 CCDC88CQ9P219 2028 aa1.12□□□□□ -2.23
PPP4R1-227ENST00000583988 TRAPPC13A5PLN9 417 aa1.12□□□□□ -2.23
PPP4R1-227ENST00000583988 OR51F1A6NGY5 319 aa1.12□□□□□ -2.23
PPP4R1-227ENST00000583988 EEF1E1-BLOC1S5C9J1V9 151 aa1.12□□□□□ -2.23
PPP4R1-227ENST00000583988 LST1O00453 97 aa1.12□□□□□ -2.23
PPP4R1-227ENST00000583988 PLA2G10O15496 165 aa1.12□□□□□ -2.23
PPP4R1-227ENST00000583988 C1QAP02745 245 aa1.12□□□□□ -2.23
PPP4R1-227ENST00000583988 SERPINA6P08185 405 aa1.12□□□□□ -2.23
PPP4R1-227ENST00000583988 SRP19P09132 144 aaKnown RBP1.12□□□□□ -2.23
PPP4R1-227ENST00000583988 CCL5P13501 91 aa1.12□□□□□ -2.23
PPP4R1-227ENST00000583988 CCL1P22362 96 aa1.12□□□□□ -2.23
PPP4R1-227ENST00000583988 MSNP26038 577 aaKnown RBP1.12□□□□□ -2.23
PPP4R1-227ENST00000583988 S100A7P31151 101 aa1.12□□□□□ -2.23
PPP4R1-227ENST00000583988 RPL28P46779 137 aaKnown RBP1.12□□□□□ -2.23
PPP4R1-227ENST00000583988 OR4D2P58180 307 aa1.12□□□□□ -2.23
PPP4R1-227ENST00000583988 TNFAIP6P98066 277 aaPredicted RBP1.12□□□□□ -2.23
PPP4R1-227ENST00000583988 PMAIP1Q13794 54 aa1.12□□□□□ -2.23
PPP4R1-227ENST00000583988 TMEM155Q4W5P6 130 aa1.12□□□□□ -2.23
PPP4R1-227ENST00000583988 TNFAIP8L3Q5GJ75 292 aa1.12□□□□□ -2.23
PPP4R1-227ENST00000583988 SSX8Q7RTT4 187 aa1.12□□□□□ -2.23
PPP4R1-227ENST00000583988 PACRGLQ8N7B6 248 aa1.12□□□□□ -2.23
PPP4R1-227ENST00000583988 OR1M1Q8NGA1 313 aa1.12□□□□□ -2.23
PPP4R1-227ENST00000583988 OR51D1Q8NGF3 324 aa1.12□□□□□ -2.23
PPP4R1-227ENST00000583988 SGMS2Q8NHU3 365 aa1.12□□□□□ -2.23
PPP4R1-227ENST00000583988 ACOT12Q8WYK0 555 aa1.12□□□□□ -2.23
PPP4R1-227ENST00000583988 SLC35B4Q969S0 331 aa1.12□□□□□ -2.23
PPP4R1-227ENST00000583988 DCUN1D1Q96GG9 259 aa1.12□□□□□ -2.23
PPP4R1-227ENST00000583988 COMMD5Q9GZQ3 224 aa1.12□□□□□ -2.23
PPP4R1-227ENST00000583988 VPS29Q9UBQ0 182 aa1.12□□□□□ -2.23
PPP4R1-227ENST00000583988 COQ4Q9Y3A0 265 aa1.12□□□□□ -2.23
PPP4R1-227ENST00000583988 KMT2BQ9UMN6 2715 aaPredicted RBP1.12□□□□□ -2.23
PPP4R1-227ENST00000583988 IGKV2-40A0A087WW87 121 aaPredicted RBP1.11□□□□□ -2.23
PPP4R1-227ENST00000583988 IGKV3D-7A0A0C4DH55 119 aa1.11□□□□□ -2.23
PPP4R1-227ENST00000583988 IGKV3OR2-268A0A0C4DH90 116 aa1.11□□□□□ -2.23
PPP4R1-227ENST00000583988 A0A0D9SEW6 157 aa1.11□□□□□ -2.23
PPP4R1-227ENST00000583988 TRBV6-5A0A0K0K1A5 114 aa1.11□□□□□ -2.23
PPP4R1-227ENST00000583988 MEIS3P1A6NDR6 274 aa1.11□□□□□ -2.23
PPP4R1-227ENST00000583988 I3L521 148 aa1.11□□□□□ -2.23
PPP4R1-227ENST00000583988 IGKV2D-40P01614 121 aaPredicted RBP1.11□□□□□ -2.23
PPP4R1-227ENST00000583988 IL9P15248 144 aa1.11□□□□□ -2.23
PPP4R1-227ENST00000583988 NFYAP23511 347 aaPredicted RBP1.11□□□□□ -2.23
PPP4R1-227ENST00000583988 CDKN2CP42773 168 aa1.11□□□□□ -2.23
PPP4R1-227ENST00000583988 ELOBQ15370 118 aa1.11□□□□□ -2.23
PPP4R1-227ENST00000583988 SPA17Q15506 151 aa1.11□□□□□ -2.23
PPP4R1-227ENST00000583988 SFXN4Q6P4A7 337 aa1.11□□□□□ -2.23
PPP4R1-227ENST00000583988 C20orf196Q8IYI0 205 aa1.11□□□□□ -2.23
PPP4R1-227ENST00000583988 C1orf158Q8N1D5 194 aa1.11□□□□□ -2.23
PPP4R1-227ENST00000583988 MCFD2Q8NI22 146 aa1.11□□□□□ -2.23
PPP4R1-227ENST00000583988 ANKRD7Q92527 254 aa1.11□□□□□ -2.23
PPP4R1-227ENST00000583988 UCK1Q9HA47 277 aa1.11□□□□□ -2.23
PPP4R1-227ENST00000583988 PRTFDC1Q9NRG1 225 aa1.11□□□□□ -2.23
PPP4R1-227ENST00000583988 PAQR5Q9NXK6 330 aaPredicted RBP1.11□□□□□ -2.23
PPP4R1-227ENST00000583988 SOX21Q9Y651 276 aaPredicted RBP1.11□□□□□ -2.23
PPP4R1-227ENST00000583988 TRBV20OR9-2A0A075B6H5 130 aa1.1□□□□□ -2.23
PPP4R1-227ENST00000583988 IRGMA1A4Y4 181 aa1.1□□□□□ -2.23
PPP4R1-227ENST00000583988 H3BT86 120 aa1.1□□□□□ -2.23
PPP4R1-227ENST00000583988 RPS17P08708 135 aaKnown RBP1.1□□□□□ -2.23
PPP4R1-227ENST00000583988 RPSAP08865 295 aaKnown RBP1.1□□□□□ -2.23
PPP4R1-227ENST00000583988 LYNX1P0DP58 116 aa1.1□□□□□ -2.23
PPP4R1-227ENST00000583988 FGF6P10767 208 aa1.1□□□□□ -2.23
PPP4R1-227ENST00000583988 MYL6P60660 151 aa1.1□□□□□ -2.23
PPP4R1-227ENST00000583988 IFITM2Q01629 132 aa1.1□□□□□ -2.23
PPP4R1-227ENST00000583988 NDUFA5Q16718 116 aa1.1□□□□□ -2.23
PPP4R1-227ENST00000583988 AKIRIN2Q53H80 203 aa1.1□□□□□ -2.23
PPP4R1-227ENST00000583988 LPCAT3Q6P1A2 487 aa1.1□□□□□ -2.23
PPP4R1-227ENST00000583988 Q6ZS49 121 aa1.1□□□□□ -2.23
PPP4R1-227ENST00000583988 C7orf65Q6ZTY9 151 aa1.1□□□□□ -2.23
PPP4R1-227ENST00000583988 FP248Q71RG6 208 aaPredicted RBP1.1□□□□□ -2.23
PPP4R1-227ENST00000583988 SLC36A1Q7Z2H8 476 aa1.1□□□□□ -2.23
PPP4R1-227ENST00000583988 LRRC25Q8N386 305 aaPredicted RBP1.1□□□□□ -2.23
PPP4R1-227ENST00000583988 C10orf105Q8TEF2 133 aa1.1□□□□□ -2.23
PPP4R1-227ENST00000583988 Q96M85 177 aa1.1□□□□□ -2.23
PPP4R1-227ENST00000583988 ERMAPQ96PL5 475 aaPredicted RBP1.1□□□□□ -2.23
PPP4R1-227ENST00000583988 CMSS1Q9BQ75 279 aaKnown RBP1.1□□□□□ -2.23
PPP4R1-227ENST00000583988 ULBP3Q9BZM4 244 aa1.1□□□□□ -2.23
PPP4R1-227ENST00000583988 OR51V1Q9H2C8 321 aa1.1□□□□□ -2.23
PPP4R1-227ENST00000583988 NAT8Q9UHE5 227 aa1.1□□□□□ -2.23
PPP4R1-227ENST00000583988 FUT9Q9Y231 359 aa1.1□□□□□ -2.23
PPP4R1-227ENST00000583988 GLI3P10071 1580 aa1.09□□□□□ -2.23
PPP4R1-227ENST00000583988 TGIF2-C20orf24A0A0A6YYL0 155 aa1.09□□□□□ -2.23
PPP4R1-227ENST00000583988 PQLC2LA1A4F0 135 aa1.09□□□□□ -2.23
PPP4R1-227ENST00000583988 CLDN24A6NM45 220 aa1.09□□□□□ -2.23
PPP4R1-227ENST00000583988 LEPROTO15243 131 aa1.09□□□□□ -2.23
PPP4R1-227ENST00000583988 SLC22A1O15245 554 aa1.09□□□□□ -2.23
PPP4R1-227ENST00000583988 LYPLA2O95372 231 aa1.09□□□□□ -2.23
PPP4R1-227ENST00000583988 NSA2O95478 260 aaKnown RBP1.09□□□□□ -2.23
PPP4R1-227ENST00000583988 HLA-DRB1P01911 266 aa1.09□□□□□ -2.23
PPP4R1-227ENST00000583988 SULT1A3P0DMM9 295 aa1.09□□□□□ -2.23
PPP4R1-227ENST00000583988 SULT1A4P0DMN0 295 aa1.09□□□□□ -2.23
PPP4R1-227ENST00000583988 AESQ08117 197 aa1.09□□□□□ -2.23
PPP4R1-227ENST00000583988 STX5Q13190 355 aa1.09□□□□□ -2.23
PPP4R1-227ENST00000583988 ARHGAP11BQ3KRB8 267 aa1.09□□□□□ -2.23
PPP4R1-227ENST00000583988 SYPL2Q5VXT5 272 aa1.09□□□□□ -2.23
PPP4R1-227ENST00000583988 CLDN22Q8N7P3 220 aa1.09□□□□□ -2.23
PPP4R1-227ENST00000583988 ZNF676Q8N7Q3 588 aa1.09□□□□□ -2.23
PPP4R1-227ENST00000583988 MRPL30Q8TCC3 161 aaKnown RBP1.09□□□□□ -2.23
PPP4R1-227ENST00000583988 PARD6GQ9BYG4 376 aaPredicted RBP1.09□□□□□ -2.23
Retrieved 100 of 20,778 RNA–protein pairs in 44.9 ms