RNA–Protein interactions for RNA: ENST00000571554.5

RAB40B-204, Transcript of RAB40B, member RAS oncogene family, humanhuman

TSL 4

Gene RAB40B, Length 580 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40B-204ENST00000571554 APOA1P02647 267 aa10.37□□□□□ -0.75
RAB40B-204ENST00000571554 TRAPPC2P0DI81 140 aa10.37□□□□□ -0.75
RAB40B-204ENST00000571554 TRAPPC2BP0DI82 140 aa10.37□□□□□ -0.75
RAB40B-204ENST00000571554 SMIM18P0DKX4 95 aa10.37□□□□□ -0.75
RAB40B-204ENST00000571554 CBLN1P23435 193 aa10.37□□□□□ -0.75
RAB40B-204ENST00000571554 WT1-ASQ06250 92 aa10.37□□□□□ -0.75
RAB40B-204ENST00000571554 TM4SF20Q53R12 229 aa10.37□□□□□ -0.75
RAB40B-204ENST00000571554 FAM209BQ5JX69 171 aa10.37□□□□□ -0.75
RAB40B-204ENST00000571554 CASC10Q5T4H9 136 aa10.37□□□□□ -0.75
RAB40B-204ENST00000571554 SLC25A24Q6NUK1 477 aa10.37□□□□□ -0.75
RAB40B-204ENST00000571554 UNQ9165/PRO28630Q6UXU0 137 aa10.37□□□□□ -0.75
RAB40B-204ENST00000571554 GPHB5Q86YW7 130 aa10.37□□□□□ -0.75
RAB40B-204ENST00000571554 CMTM1Q8IZ96 169 aa10.37□□□□□ -0.75
RAB40B-204ENST00000571554 OR2K2Q8NGT1 345 aa10.37□□□□□ -0.75
RAB40B-204ENST00000571554 BORCS5Q969J3 196 aa10.37□□□□□ -0.75
RAB40B-204ENST00000571554 GAR1Q9NY12 217 aaKnown RBP10.37□□□□□ -0.75
RAB40B-204ENST00000571554 TRBV7-1A0A0A6YYK4 115 aa10.36□□□□□ -0.75
RAB40B-204ENST00000571554 DBX1A6NMT0 343 aa10.36□□□□□ -0.75
RAB40B-204ENST00000571554 TPPPO94811 219 aa10.36□□□□□ -0.75
RAB40B-204ENST00000571554 SCAF4O95104 1147 aaKnown RBP10.36□□□□□ -0.75
RAB40B-204ENST00000571554 RORCP51449 518 aa10.36□□□□□ -0.75
RAB40B-204ENST00000571554 FAM106AQ4KMX7 169 aa10.36□□□□□ -0.75
RAB40B-204ENST00000571554 BTNL8Q6UX41 500 aa10.36□□□□□ -0.75
RAB40B-204ENST00000571554 TBC1D26Q86UD7 250 aa10.36□□□□□ -0.75
RAB40B-204ENST00000571554 GDPD1Q8N9F7 314 aa10.36□□□□□ -0.75
RAB40B-204ENST00000571554 UXS1Q8NBZ7 420 aa10.36□□□□□ -0.75
RAB40B-204ENST00000571554 OR1L8Q8NGR8 309 aa10.36□□□□□ -0.75
RAB40B-204ENST00000571554 ZNF502Q8TBZ5 544 aa10.36□□□□□ -0.75
RAB40B-204ENST00000571554 CXorf58Q96LI9 332 aa10.36□□□□□ -0.75
RAB40B-204ENST00000571554 CITED4Q96RK1 184 aa10.36□□□□□ -0.75
RAB40B-204ENST00000571554 FAM110AQ9BQ89 295 aa10.36□□□□□ -0.75
RAB40B-204ENST00000571554 SPATA25Q9BR10 227 aa10.36□□□□□ -0.75
RAB40B-204ENST00000571554 PALMDQ9NP74 551 aa10.36□□□□□ -0.75
RAB40B-204ENST00000571554 SLC2A8Q9NY64 477 aa10.36□□□□□ -0.75
RAB40B-204ENST00000571554 MLXQ9UH92 298 aa10.36□□□□□ -0.75
RAB40B-204ENST00000571554 OR51B2Q9Y5P1 312 aa10.36□□□□□ -0.75
RAB40B-204ENST00000571554 OR2T8A6NH00 312 aa10.35□□□□□ -0.75
RAB40B-204ENST00000571554 SERPINE2P07093 398 aa10.35□□□□□ -0.75
RAB40B-204ENST00000571554 LYL1P12980 280 aa10.35□□□□□ -0.75
RAB40B-204ENST00000571554 RCVRNP35243 200 aa10.35□□□□□ -0.75
RAB40B-204ENST00000571554 MFAP2P55001 183 aa10.35□□□□□ -0.75
RAB40B-204ENST00000571554 KLK9Q2XQG4 91 aa10.35□□□□□ -0.75
RAB40B-204ENST00000571554 GPR107Q5VW38 600 aa10.35□□□□□ -0.75
RAB40B-204ENST00000571554 PLET1Q6UQ28 207 aa10.35□□□□□ -0.75
RAB40B-204ENST00000571554 TMEM61Q8N0U2 210 aa10.35□□□□□ -0.75
RAB40B-204ENST00000571554 SRD5A3Q9H8P0 318 aa10.35□□□□□ -0.75
RAB40B-204ENST00000571554 SCPEP1Q9HB40 452 aa10.35□□□□□ -0.75
RAB40B-204ENST00000571554 KLK9Q9UKQ9 250 aa10.35□□□□□ -0.75
RAB40B-204ENST00000571554 CEPT1Q9Y6K0 416 aa10.35□□□□□ -0.75
RAB40B-204ENST00000571554 IGHV3OR16-8A0A075B7F1 116 aa10.34□□□□□ -0.75
RAB40B-204ENST00000571554 RBMY1BA6NDE4 496 aaKnown RBP10.34□□□□□ -0.75
RAB40B-204ENST00000571554 RBMY1EA6NEQ0 496 aaKnown RBP10.34□□□□□ -0.75
RAB40B-204ENST00000571554 A8MWP6 167 aa10.34□□□□□ -0.75
RAB40B-204ENST00000571554 OR11H12B2RN74 326 aa10.34□□□□□ -0.75
RAB40B-204ENST00000571554 SNAPC5O75971 98 aa10.34□□□□□ -0.75
RAB40B-204ENST00000571554 RBMY1DP0C7P1 496 aaKnown RBP10.34□□□□□ -0.75
RAB40B-204ENST00000571554 PI3P19957 117 aa10.34□□□□□ -0.75
RAB40B-204ENST00000571554 CTF1Q16619 201 aa10.34□□□□□ -0.75
RAB40B-204ENST00000571554 ZNF57Q68EA5 555 aaPredicted RBP10.34□□□□□ -0.75
RAB40B-204ENST00000571554 UBAC2Q8NBM4 344 aa10.34□□□□□ -0.75
RAB40B-204ENST00000571554 LSM10Q969L4 123 aaKnown RBP10.34□□□□□ -0.75
RAB40B-204ENST00000571554 CMTM3Q96MX0 182 aa10.34□□□□□ -0.75
RAB40B-204ENST00000571554 SRSF8Q9BRL6 282 aaKnown RBP10.34□□□□□ -0.75
RAB40B-204ENST00000571554 EDA2RQ9HAV5 297 aa10.34□□□□□ -0.75
RAB40B-204ENST00000571554 NDUFA4L2Q9NRX3 87 aa10.34□□□□□ -0.75
RAB40B-204ENST00000571554 TECRQ9NZ01 308 aaKnown RBP10.34□□□□□ -0.75
RAB40B-204ENST00000571554 THYN1Q9P016 225 aa10.34□□□□□ -0.75
RAB40B-204ENST00000571554 EXTL2Q9UBQ6 330 aa10.34□□□□□ -0.75
RAB40B-204ENST00000571554 KLK11Q9UBX7 282 aa10.34□□□□□ -0.75
RAB40B-204ENST00000571554 TGOLN2O43493 480 aa10.33□□□□□ -0.76
RAB40B-204ENST00000571554 GABARAPO95166 117 aa10.33□□□□□ -0.76
RAB40B-204ENST00000571554 IGKV1-39P01597 117 aa10.33□□□□□ -0.76
RAB40B-204ENST00000571554 IGKV1D-39P04432 117 aa10.33□□□□□ -0.76
RAB40B-204ENST00000571554 PTBP1P26599 531 aaKnown RBP eCLIP10.33□□□□□ -0.76
RAB40B-204ENST00000571554 IZUMO4Q1ZYL8 232 aa10.33□□□□□ -0.76
RAB40B-204ENST00000571554 MZT2AQ6P582 158 aa10.33□□□□□ -0.76
RAB40B-204ENST00000571554 LAX1Q8IWV1 398 aa10.33□□□□□ -0.76
RAB40B-204ENST00000571554 OR52I2Q8NH67 350 aa10.33□□□□□ -0.76
RAB40B-204ENST00000571554 MRGPRFQ96AM1 343 aa10.33□□□□□ -0.76
RAB40B-204ENST00000571554 ISOC1Q96CN7 298 aa10.33□□□□□ -0.76
RAB40B-204ENST00000571554 F11RQ9Y624 299 aaKnown RBP10.33□□□□□ -0.76
RAB40B-204ENST00000571554 C15orf61A6NNL5 157 aa10.32□□□□□ -0.76
RAB40B-204ENST00000571554 ZNF207O43670 478 aaKnown RBP10.32□□□□□ -0.76
RAB40B-204ENST00000571554 CD3DP04234 171 aa10.32□□□□□ -0.76
RAB40B-204ENST00000571554 PGAM2P15259 253 aa10.32□□□□□ -0.76
RAB40B-204ENST00000571554 S100GP29377 79 aa10.32□□□□□ -0.76
RAB40B-204ENST00000571554 SPINK9Q5DT21 86 aa10.32□□□□□ -0.76
RAB40B-204ENST00000571554 THOC7Q6I9Y2 204 aaKnown RBP10.32□□□□□ -0.76
RAB40B-204ENST00000571554 LPCAT3Q6P1A2 487 aa10.32□□□□□ -0.76
RAB40B-204ENST00000571554 LINC00322Q6ZN03 302 aaPredicted RBP10.32□□□□□ -0.76
RAB40B-204ENST00000571554 SLC38A6Q8IZM9 456 aa10.32□□□□□ -0.76
RAB40B-204ENST00000571554 OR52B4Q8NGK2 314 aa10.32□□□□□ -0.76
RAB40B-204ENST00000571554 VN1R17PQ8TDU5 208 aa10.32□□□□□ -0.76
RAB40B-204ENST00000571554 SCARB1Q8WTV0 552 aa10.32□□□□□ -0.76
RAB40B-204ENST00000571554 CHRDL1Q9BU40 450 aa10.32□□□□□ -0.76
RAB40B-204ENST00000571554 HIPK2Q9H2X6 1198 aa10.32□□□□□ -0.76
RAB40B-204ENST00000571554 PRNDQ9UKY0 176 aa10.32□□□□□ -0.76
RAB40B-204ENST00000571554 K7EIM0 57 aa10.31□□□□□ -0.76
RAB40B-204ENST00000571554 CYB5BO43169 146 aa10.31□□□□□ -0.76
RAB40B-204ENST00000571554 IGHV3-48P01763 117 aa10.31□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 47 ms