RNA–Protein interactions for RNA: ENST00000570129.1

GTF3C1-212, Transcript of general transcription factor IIIC subunit 1, humanhuman

TSL 5

Gene GTF3C1, Length 505 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C1-212ENST00000570129 SYNJ2BPP57105 145 aa7.51□□□□□ -1.21
GTF3C1-212ENST00000570129 MRPS10P82664 201 aaKnown RBP7.51□□□□□ -1.21
GTF3C1-212ENST00000570129 ATP5G2Q06055 141 aa7.51□□□□□ -1.21
GTF3C1-212ENST00000570129 MLANAQ16655 118 aa7.51□□□□□ -1.21
GTF3C1-212ENST00000570129 CNPY1Q3B7I2 92 aa7.51□□□□□ -1.21
GTF3C1-212ENST00000570129 LPCAT3Q6P1A2 487 aa7.51□□□□□ -1.21
GTF3C1-212ENST00000570129 ZNF343Q6P1L6 599 aa7.51□□□□□ -1.21
GTF3C1-212ENST00000570129 TCTEX1D1Q8N7M0 179 aa7.51□□□□□ -1.21
GTF3C1-212ENST00000570129 CD300LFQ8TDQ1 290 aa7.51□□□□□ -1.21
GTF3C1-212ENST00000570129 GPR146Q96CH1 333 aa7.51□□□□□ -1.21
GTF3C1-212ENST00000570129 CCDC140Q96MF4 163 aa7.51□□□□□ -1.21
GTF3C1-212ENST00000570129 PRR25Q96S07 402 aa7.51□□□□□ -1.21
GTF3C1-212ENST00000570129 SPIN2AQ99865 258 aa7.51□□□□□ -1.21
GTF3C1-212ENST00000570129 SPIN2BQ9BPZ2 258 aa7.51□□□□□ -1.21
GTF3C1-212ENST00000570129 COMMD9Q9P000 198 aa7.51□□□□□ -1.21
GTF3C1-212ENST00000570129 IGLV11-55A0A075B6I3 123 aa7.5□□□□□ -1.21
GTF3C1-212ENST00000570129 TEX13DA0A0J9YY54 714 aaPredicted RBP7.5□□□□□ -1.21
GTF3C1-212ENST00000570129 CRYM-AS1A6NIL9 109 aa7.5□□□□□ -1.21
GTF3C1-212ENST00000570129 NPIPB5A8MRT5 1133 aa7.5□□□□□ -1.21
GTF3C1-212ENST00000570129 H0Y980 276 aa7.5□□□□□ -1.21
GTF3C1-212ENST00000570129 OVOL1O14753 267 aa7.5□□□□□ -1.21
GTF3C1-212ENST00000570129 OR2C1O95371 312 aa7.5□□□□□ -1.21
GTF3C1-212ENST00000570129 SERPINE2P07093 398 aa7.5□□□□□ -1.21
GTF3C1-212ENST00000570129 TRAPPC2P0DI81 140 aa7.5□□□□□ -1.21
GTF3C1-212ENST00000570129 TRAPPC2BP0DI82 140 aa7.5□□□□□ -1.21
GTF3C1-212ENST00000570129 AKR1C4P17516 323 aa7.5□□□□□ -1.21
GTF3C1-212ENST00000570129 PTBP1P26599 531 aaKnown RBP eCLIP7.5□□□□□ -1.21
GTF3C1-212ENST00000570129 S100A5P33763 92 aa7.5□□□□□ -1.21
GTF3C1-212ENST00000570129 MAS1LP35410 378 aa7.5□□□□□ -1.21
GTF3C1-212ENST00000570129 ETV6P41212 452 aa7.5□□□□□ -1.21
GTF3C1-212ENST00000570129 SSBP1Q04837 148 aaKnown RBP7.5□□□□□ -1.21
GTF3C1-212ENST00000570129 EXOSC2Q13868 293 aaKnown RBP7.5□□□□□ -1.21
GTF3C1-212ENST00000570129 KLF5Q13887 457 aaPredicted RBP7.5□□□□□ -1.21
GTF3C1-212ENST00000570129 C15orf32Q32M92 178 aa7.5□□□□□ -1.21
GTF3C1-212ENST00000570129 CLEC19AQ6UXS0 136 aa7.5□□□□□ -1.21
GTF3C1-212ENST00000570129 FAM219AQ8IW50 185 aa7.5□□□□□ -1.21
GTF3C1-212ENST00000570129 OR4A5Q8NH83 315 aa7.5□□□□□ -1.21
GTF3C1-212ENST00000570129 VSTM2AQ8TAG5 236 aa7.5□□□□□ -1.21
GTF3C1-212ENST00000570129 ZFAND1Q8TCF1 268 aa7.5□□□□□ -1.21
GTF3C1-212ENST00000570129 C15orf40Q8WUR7 153 aa7.5□□□□□ -1.21
GTF3C1-212ENST00000570129 RCC1LQ96I51 464 aaKnown RBP7.5□□□□□ -1.21
GTF3C1-212ENST00000570129 COMMD5Q9GZQ3 224 aa7.5□□□□□ -1.21
GTF3C1-212ENST00000570129 NAA60Q9H7X0 242 aa7.5□□□□□ -1.21
GTF3C1-212ENST00000570129 TMEM14BQ9NUH8 114 aa7.5□□□□□ -1.21
GTF3C1-212ENST00000570129 COPZ2Q9P299 210 aa7.5□□□□□ -1.21
GTF3C1-212ENST00000570129 IZUMO1RA6ND01 250 aa7.49□□□□□ -1.21
GTF3C1-212ENST00000570129 PLA2G10O15496 165 aa7.49□□□□□ -1.21
GTF3C1-212ENST00000570129 ST8SIA3O43173 380 aa7.49□□□□□ -1.21
GTF3C1-212ENST00000570129 UCP1P25874 307 aa7.49□□□□□ -1.21
GTF3C1-212ENST00000570129 BTCP35070 178 aa7.49□□□□□ -1.21
GTF3C1-212ENST00000570129 ECI1P42126 302 aa7.49□□□□□ -1.21
GTF3C1-212ENST00000570129 ERVK-16P61578 105 aa7.49□□□□□ -1.21
GTF3C1-212ENST00000570129 EGFEM1PQ0D2K5 195 aa7.49□□□□□ -1.21
GTF3C1-212ENST00000570129 TMEM187Q14656 261 aa7.49□□□□□ -1.21
GTF3C1-212ENST00000570129 TRIM16LQ309B1 348 aa7.49□□□□□ -1.21
GTF3C1-212ENST00000570129 ANKRD55Q3KP44 614 aa7.49□□□□□ -1.21
GTF3C1-212ENST00000570129 ZNF57Q68EA5 555 aaPredicted RBP7.49□□□□□ -1.21
GTF3C1-212ENST00000570129 H2BFWTQ7Z2G1 175 aa7.49□□□□□ -1.21
GTF3C1-212ENST00000570129 LYZL2Q7Z4W2 148 aa7.49□□□□□ -1.21
GTF3C1-212ENST00000570129 TOMM5Q8N4H5 51 aa7.49□□□□□ -1.21
GTF3C1-212ENST00000570129 GDPD1Q8N9F7 314 aa7.49□□□□□ -1.21
GTF3C1-212ENST00000570129 OR1L8Q8NGR8 309 aa7.49□□□□□ -1.21
GTF3C1-212ENST00000570129 TMEM222Q9H0R3 208 aa7.49□□□□□ -1.21
GTF3C1-212ENST00000570129 SLA2Q9H6Q3 261 aa7.49□□□□□ -1.21
GTF3C1-212ENST00000570129 PEF1Q9UBV8 284 aaKnown RBP7.49□□□□□ -1.21
GTF3C1-212ENST00000570129 ZNF257Q9Y2Q1 563 aa7.49□□□□□ -1.21
GTF3C1-212ENST00000570129 IGHV3OR16-8A0A075B7F1 116 aa7.48□□□□□ -1.21
GTF3C1-212ENST00000570129 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP7.48□□□□□ -1.21
GTF3C1-212ENST00000570129 C15orf61A6NNL5 157 aa7.48□□□□□ -1.21
GTF3C1-212ENST00000570129 F8W735 103 aaPredicted RBP7.48□□□□□ -1.21
GTF3C1-212ENST00000570129 H3BUA1 57 aa7.48□□□□□ -1.21
GTF3C1-212ENST00000570129 SNAPC5O75971 98 aa7.48□□□□□ -1.21
GTF3C1-212ENST00000570129 BRI3O95415 125 aa7.48□□□□□ -1.21
GTF3C1-212ENST00000570129 CDS2O95674 445 aa7.48□□□□□ -1.21
GTF3C1-212ENST00000570129 CSN3P07498 182 aa7.48□□□□□ -1.21
GTF3C1-212ENST00000570129 OR8U8P0C7N1 319 aa7.48□□□□□ -1.21
GTF3C1-212ENST00000570129 KLK9Q2XQG4 91 aa7.48□□□□□ -1.21
GTF3C1-212ENST00000570129 TMEM268Q5VZI3 342 aa7.48□□□□□ -1.21
GTF3C1-212ENST00000570129 SLC25A24Q6NUK1 477 aa7.48□□□□□ -1.21
GTF3C1-212ENST00000570129 TMED4Q7Z7H5 227 aa7.48□□□□□ -1.21
GTF3C1-212ENST00000570129 NECAP1Q8NC96 275 aa7.48□□□□□ -1.21
GTF3C1-212ENST00000570129 OR4A16Q8NH70 328 aa7.48□□□□□ -1.21
GTF3C1-212ENST00000570129 CACNG8Q8WXS5 425 aa7.48□□□□□ -1.21
GTF3C1-212ENST00000570129 ZNF486Q96H40 463 aaPredicted RBP7.48□□□□□ -1.21
GTF3C1-212ENST00000570129 TMEM68Q96MH6 324 aa7.48□□□□□ -1.21
GTF3C1-212ENST00000570129 SLC2A8Q9NY64 477 aa7.48□□□□□ -1.21
GTF3C1-212ENST00000570129 MRPL36Q9P0J6 103 aaKnown RBP7.48□□□□□ -1.21
GTF3C1-212ENST00000570129 KLK9Q9UKQ9 250 aa7.48□□□□□ -1.21
GTF3C1-212ENST00000570129 C14orf166Q9Y224 244 aaKnown RBP7.48□□□□□ -1.21
GTF3C1-212ENST00000570129 K7EIM0 57 aa7.47□□□□□ -1.21
GTF3C1-212ENST00000570129 SAP30O75446 220 aa7.47□□□□□ -1.21
GTF3C1-212ENST00000570129 CLEC3BP05452 202 aa7.47□□□□□ -1.21
GTF3C1-212ENST00000570129 DEFA4P12838 97 aa7.47□□□□□ -1.21
GTF3C1-212ENST00000570129 IL7P13232 177 aa7.47□□□□□ -1.21
GTF3C1-212ENST00000570129 SPNP16150 400 aa7.47□□□□□ -1.21
GTF3C1-212ENST00000570129 CD40LGP29965 261 aa7.47□□□□□ -1.21
GTF3C1-212ENST00000570129 SLC6A1P30531 599 aa7.47□□□□□ -1.21
GTF3C1-212ENST00000570129 HSPE1P61604 102 aaKnown RBP7.47□□□□□ -1.21
GTF3C1-212ENST00000570129 DEFB121Q5J5C9 76 aa7.47□□□□□ -1.21
GTF3C1-212ENST00000570129 SPANXN2Q5MJ10 180 aa7.47□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 74.3 ms