RNA–Protein interactions for RNA: ENST00000560417.5

MARK3-220, Transcript of microtubule affinity regulating kinase 3, humanhuman

TSL 3

Gene MARK3, Length 579 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MARK3-220ENST00000560417 HS3ST5Q8IZT8 346 aa2.52□□□□□ -2.01
MARK3-220ENST00000560417 OR9I1Q8NGQ6 314 aa2.52□□□□□ -2.01
MARK3-220ENST00000560417 CD200R1Q8TD46 325 aa2.52□□□□□ -2.01
MARK3-220ENST00000560417 CT55Q8WUE5 264 aa2.52□□□□□ -2.01
MARK3-220ENST00000560417 SKA2Q8WVK7 121 aaPredicted RBP2.52□□□□□ -2.01
MARK3-220ENST00000560417 LCN9Q8WX39 176 aa2.52□□□□□ -2.01
MARK3-220ENST00000560417 EBNA1BP2Q99848 306 aaKnown RBP2.52□□□□□ -2.01
MARK3-220ENST00000560417 UGT2B28Q9BY64 529 aa2.52□□□□□ -2.01
MARK3-220ENST00000560417 TRIM4Q9C037 500 aa2.52□□□□□ -2.01
MARK3-220ENST00000560417 ARL6Q9H0F7 186 aa2.52□□□□□ -2.01
MARK3-220ENST00000560417 ZNF286AQ9HBT8 521 aa2.52□□□□□ -2.01
MARK3-220ENST00000560417 COMMD9Q9P000 198 aa2.52□□□□□ -2.01
MARK3-220ENST00000560417 FBXL3Q9UKT7 428 aa2.52□□□□□ -2.01
MARK3-220ENST00000560417 MED13Q9UHV7 2174 aa2.51□□□□□ -2.01
MARK3-220ENST00000560417 SPTA1P02549 2419 aa2.51□□□□□ -2.01
MARK3-220ENST00000560417 MDC1Q14676 2089 aaKnown RBP2.51□□□□□ -2.01
MARK3-220ENST00000560417 HEATR5BQ9P2D3 2071 aa2.51□□□□□ -2.01
MARK3-220ENST00000560417 VPS13CQ709C8 3753 aa2.51□□□□□ -2.01
MARK3-220ENST00000560417 NBASA2RRP1 2371 aa2.51□□□□□ -2.01
MARK3-220ENST00000560417 HECTD1Q9ULT8 2610 aa2.51□□□□□ -2.01
MARK3-220ENST00000560417 COL6A6A6NMZ7 2263 aa2.51□□□□□ -2.01
MARK3-220ENST00000560417 MYO18BQ8IUG5 2567 aa2.51□□□□□ -2.01
MARK3-220ENST00000560417 TLCD2A6NGC4 264 aa2.51□□□□□ -2.01
MARK3-220ENST00000560417 OR5K4A6NMS3 321 aa2.51□□□□□ -2.01
MARK3-220ENST00000560417 LIN7AO14910 233 aaPredicted RBP2.51□□□□□ -2.01
MARK3-220ENST00000560417 GUSBP08236 651 aa2.51□□□□□ -2.01
MARK3-220ENST00000560417 OGNP20774 298 aaKnown RBP2.51□□□□□ -2.01
MARK3-220ENST00000560417 RPS3P23396 243 aaKnown RBP eCLIP2.51□□□□□ -2.01
MARK3-220ENST00000560417 RAB8AP61006 207 aa2.51□□□□□ -2.01
MARK3-220ENST00000560417 TIMM23BQ5SRD1 257 aa2.51□□□□□ -2.01
MARK3-220ENST00000560417 PTRHD1Q6GMV3 140 aaKnown RBP2.51□□□□□ -2.01
MARK3-220ENST00000560417 TCF24Q7RTU0 167 aa2.51□□□□□ -2.01
MARK3-220ENST00000560417 OOSP2Q86WS3 158 aa2.51□□□□□ -2.01
MARK3-220ENST00000560417 OR11L1Q8NGX0 322 aa2.51□□□□□ -2.01
MARK3-220ENST00000560417 EEF1AKMT1Q8WVE0 214 aa2.51□□□□□ -2.01
MARK3-220ENST00000560417 ZCCHC13Q8WW36 166 aaKnown RBP2.51□□□□□ -2.01
MARK3-220ENST00000560417 PPWD1Q96BP3 646 aaKnown RBP2.51□□□□□ -2.01
MARK3-220ENST00000560417 ZNF514Q96K75 400 aaPredicted RBP2.51□□□□□ -2.01
MARK3-220ENST00000560417 PPP1R2P1Q96PQ5 205 aa2.51□□□□□ -2.01
MARK3-220ENST00000560417 DDA1Q9BW61 102 aa2.51□□□□□ -2.01
MARK3-220ENST00000560417 HIGD2AQ9BW72 106 aa2.51□□□□□ -2.01
MARK3-220ENST00000560417 ULBP3Q9BZM4 244 aa2.51□□□□□ -2.01
MARK3-220ENST00000560417 AICDAQ9GZX7 198 aa2.51□□□□□ -2.01
MARK3-220ENST00000560417 UCK1Q9HA47 277 aa2.51□□□□□ -2.01
MARK3-220ENST00000560417 CD300AQ9UGN4 299 aa2.51□□□□□ -2.01
MARK3-220ENST00000560417 FBXO5Q9UKT4 447 aa2.51□□□□□ -2.01
MARK3-220ENST00000560417 GMEB1Q9Y692 573 aa2.51□□□□□ -2.01
MARK3-220ENST00000560417 V9GYY5 206 aaPredicted RBP2.51□□□□□ -2.01
MARK3-220ENST00000560417 AKAP9Q99996 3911 aa2.51□□□□□ -2.01
MARK3-220ENST00000560417 SCN3AQ9NY46 2000 aa2.51□□□□□ -2.01
MARK3-220ENST00000560417 USP9XQ93008 2570 aaPredicted RBP2.51□□□□□ -2.01
MARK3-220ENST00000560417 NUP210LQ5VU65 1888 aa2.5□□□□□ -2.01
MARK3-220ENST00000560417 IGKV1-12A0A0C4DH73 117 aa2.5□□□□□ -2.01
MARK3-220ENST00000560417 A0A0J9YY10 115 aa2.5□□□□□ -2.01
MARK3-220ENST00000560417 TMEM213A2RRL7 107 aa2.5□□□□□ -2.01
MARK3-220ENST00000560417 ZNF860A6NHJ4 632 aa2.5□□□□□ -2.01
MARK3-220ENST00000560417 ARGFXA6NJG6 315 aa2.5□□□□□ -2.01
MARK3-220ENST00000560417 C2orf74A8MZ97 194 aa2.5□□□□□ -2.01
MARK3-220ENST00000560417 E5RI56 91 aa2.5□□□□□ -2.01
MARK3-220ENST00000560417 E7EQL1 145 aa2.5□□□□□ -2.01
MARK3-220ENST00000560417 CDS2O95674 445 aa2.5□□□□□ -2.01
MARK3-220ENST00000560417 IGKV1D-12P01611 117 aa2.5□□□□□ -2.01
MARK3-220ENST00000560417 CD151P48509 253 aa2.5□□□□□ -2.01
MARK3-220ENST00000560417 TBPL1P62380 186 aa2.5□□□□□ -2.01
MARK3-220ENST00000560417 EIF3IQ13347 325 aaKnown RBP2.5□□□□□ -2.01
MARK3-220ENST00000560417 TSNQ15631 228 aaKnown RBP2.5□□□□□ -2.01
MARK3-220ENST00000560417 DEFB109BQ30KR1 87 aa2.5□□□□□ -2.01
MARK3-220ENST00000560417 SPANXN3Q5MJ09 141 aa2.5□□□□□ -2.01
MARK3-220ENST00000560417 NIPAL1Q6NVV3 410 aa2.5□□□□□ -2.01
MARK3-220ENST00000560417 C8orf74Q6P047 294 aa2.5□□□□□ -2.01
MARK3-220ENST00000560417 SBSNQ6UWP8 590 aa2.5□□□□□ -2.01
MARK3-220ENST00000560417 RPS27LQ71UM5 84 aaKnown RBP2.5□□□□□ -2.01
MARK3-220ENST00000560417 VN1R4Q7Z5H5 301 aa2.5□□□□□ -2.01
MARK3-220ENST00000560417 KRTAP13-1Q8IUC0 172 aa2.5□□□□□ -2.01
MARK3-220ENST00000560417 OR4P4Q8NGL7 312 aa2.5□□□□□ -2.01
MARK3-220ENST00000560417 ANP32BQ92688 251 aaKnown RBP2.5□□□□□ -2.01
MARK3-220ENST00000560417 LRRC45Q96CN5 670 aa2.5□□□□□ -2.01
MARK3-220ENST00000560417 C1orf109Q9NX04 203 aa2.5□□□□□ -2.01
MARK3-220ENST00000560417 EURLQ9NYK6 297 aa2.5□□□□□ -2.01
MARK3-220ENST00000560417 LRRK2Q5S007 2527 aa2.49□□□□□ -2.01
MARK3-220ENST00000560417 ASH1LQ9NR48 2969 aaKnown RBP2.49□□□□□ -2.01
MARK3-220ENST00000560417 PTPN13Q12923 2485 aa2.49□□□□□ -2.01
MARK3-220ENST00000560417 FAM159BA6NKW6 160 aa2.49□□□□□ -2.01
MARK3-220ENST00000560417 TRPC5OSA6NMA1 111 aa2.49□□□□□ -2.01
MARK3-220ENST00000560417 C9J4A7 227 aa2.49□□□□□ -2.01
MARK3-220ENST00000560417 E7EQ34 232 aa2.49□□□□□ -2.01
MARK3-220ENST00000560417 H0YGG7 62 aa2.49□□□□□ -2.01
MARK3-220ENST00000560417 SMLR1H3BR10 107 aa2.49□□□□□ -2.01
MARK3-220ENST00000560417 TOX3O15405 576 aaPredicted RBP2.49□□□□□ -2.01
MARK3-220ENST00000560417 ZNF189O75820 626 aaPredicted RBP2.49□□□□□ -2.01
MARK3-220ENST00000560417 KLF7O75840 302 aaPredicted RBP2.49□□□□□ -2.01
MARK3-220ENST00000560417 OR2B3O76000 313 aa2.49□□□□□ -2.01
MARK3-220ENST00000560417 RAB36O95755 333 aa2.49□□□□□ -2.01
MARK3-220ENST00000560417 SHBGP04278 402 aa2.49□□□□□ -2.01
MARK3-220ENST00000560417 ZNF22P17026 224 aaPredicted RBP2.49□□□□□ -2.01
MARK3-220ENST00000560417 FUSP35637 526 aaKnown RBP eCLIP2.49□□□□□ -2.01
MARK3-220ENST00000560417 DLX6P56179 175 aa2.49□□□□□ -2.01
MARK3-220ENST00000560417 TMED2Q15363 201 aa2.49□□□□□ -2.01
MARK3-220ENST00000560417 UAP1Q16222 522 aaPredicted RBP2.49□□□□□ -2.01
MARK3-220ENST00000560417 AGTRAPQ6RW13 159 aa2.49□□□□□ -2.01
Retrieved 100 of 20,778 RNA–protein pairs in 140.2 ms