RNA–Protein interactions for RNA: ENST00000550629.1

SCAF11-213, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 2

Gene SCAF11, Length 579 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-213ENST00000550629 SUPT4H1P63272 117 aaKnown RBP4.55□□□□□ -1.68
SCAF11-213ENST00000550629 HES1Q14469 280 aa4.55□□□□□ -1.68
SCAF11-213ENST00000550629 POU2AF1Q16633 256 aa4.55□□□□□ -1.68
SCAF11-213ENST00000550629 ASPHD1Q5U4P2 390 aa4.55□□□□□ -1.68
SCAF11-213ENST00000550629 LRTM2Q8N967 370 aa4.55□□□□□ -1.68
SCAF11-213ENST00000550629 ADAD2Q8NCV1 583 aaKnown RBP4.55□□□□□ -1.68
SCAF11-213ENST00000550629 OR51H1Q8NH63 302 aa4.55□□□□□ -1.68
SCAF11-213ENST00000550629 VSTM2AQ8TAG5 236 aa4.55□□□□□ -1.68
SCAF11-213ENST00000550629 TMEM230Q96A57 120 aa4.55□□□□□ -1.68
SCAF11-213ENST00000550629 TMEM56Q96MV1 263 aa4.55□□□□□ -1.68
SCAF11-213ENST00000550629 RBM14Q96PK6 669 aaKnown RBP4.55□□□□□ -1.68
SCAF11-213ENST00000550629 RANBP3Q9H6Z4 567 aaPredicted RBP4.55□□□□□ -1.68
SCAF11-213ENST00000550629 CACFD1Q9UGQ2 172 aa4.55□□□□□ -1.68
SCAF11-213ENST00000550629 MOB4Q9Y3A3 225 aa4.55□□□□□ -1.68
SCAF11-213ENST00000550629 SOX21Q9Y651 276 aaPredicted RBP4.55□□□□□ -1.68
SCAF11-213ENST00000550629 TMEM56-RWDD3S4R434 201 aa4.55□□□□□ -1.68
SCAF11-213ENST00000550629 FN1P02751 2386 aaKnown RBP4.55□□□□□ -1.68
SCAF11-213ENST00000550629 IGHV3-72A0A0B4J1Y9 119 aa4.54□□□□□ -1.68
SCAF11-213ENST00000550629 A0A0B4J2A0 478 aa4.54□□□□□ -1.68
SCAF11-213ENST00000550629 DUXBA0A1W2PPF3 345 aa4.54□□□□□ -1.68
SCAF11-213ENST00000550629 C9orf170A2RU37 121 aa4.54□□□□□ -1.68
SCAF11-213ENST00000550629 TRIM77I1YAP6 450 aa4.54□□□□□ -1.68
SCAF11-213ENST00000550629 RHODO00212 210 aa4.54□□□□□ -1.68
SCAF11-213ENST00000550629 ARPC1BO15143 372 aaKnown RBP4.54□□□□□ -1.68
SCAF11-213ENST00000550629 NBR2O15453 112 aa4.54□□□□□ -1.68
SCAF11-213ENST00000550629 GPR137BO60478 399 aa4.54□□□□□ -1.68
SCAF11-213ENST00000550629 RAMP3O60896 148 aa4.54□□□□□ -1.68
SCAF11-213ENST00000550629 NDUFA3O95167 84 aa4.54□□□□□ -1.68
SCAF11-213ENST00000550629 SFT2D2O95562 160 aa4.54□□□□□ -1.68
SCAF11-213ENST00000550629 CRYZL1O95825 349 aa4.54□□□□□ -1.68
SCAF11-213ENST00000550629 DHFRP00374 187 aa4.54□□□□□ -1.68
SCAF11-213ENST00000550629 HLA-AP01891 365 aaKnown RBP4.54□□□□□ -1.68
SCAF11-213ENST00000550629 IL5P05113 134 aa4.54□□□□□ -1.68
SCAF11-213ENST00000550629 OR5AC1P0C628 307 aa4.54□□□□□ -1.68
SCAF11-213ENST00000550629 OR4E1P0C645 316 aa4.54□□□□□ -1.68
SCAF11-213ENST00000550629 LPAR6P43657 344 aa4.54□□□□□ -1.68
SCAF11-213ENST00000550629 ERVK-16P61578 105 aa4.54□□□□□ -1.68
SCAF11-213ENST00000550629 UBA52P62987 128 aaKnown RBP4.54□□□□□ -1.68
SCAF11-213ENST00000550629 PPP1R1AQ13522 171 aa4.54□□□□□ -1.68
SCAF11-213ENST00000550629 OXA1LQ15070 435 aa4.54□□□□□ -1.68
SCAF11-213ENST00000550629 PSG5Q15238 335 aa4.54□□□□□ -1.68
SCAF11-213ENST00000550629 MMDQ15546 238 aa4.54□□□□□ -1.68
SCAF11-213ENST00000550629 VMA21Q3ZAQ7 101 aa4.54□□□□□ -1.68
SCAF11-213ENST00000550629 ZNF585BQ52M93 769 aa4.54□□□□□ -1.68
SCAF11-213ENST00000550629 GLDNQ6ZMI3 551 aaPredicted RBP4.54□□□□□ -1.68
SCAF11-213ENST00000550629 LYG2Q86SG7 212 aa4.54□□□□□ -1.68
SCAF11-213ENST00000550629 FAM219AQ8IW50 185 aa4.54□□□□□ -1.68
SCAF11-213ENST00000550629 LGI3Q8N145 548 aa4.54□□□□□ -1.68
SCAF11-213ENST00000550629 FAM71E2Q8N5Q1 922 aa4.54□□□□□ -1.68
SCAF11-213ENST00000550629 TEX45Q8NA69 505 aa4.54□□□□□ -1.68
SCAF11-213ENST00000550629 OR4A5Q8NH83 315 aa4.54□□□□□ -1.68
SCAF11-213ENST00000550629 SPATA3Q8NHX4 192 aa4.54□□□□□ -1.68
SCAF11-213ENST00000550629 GLYATL2Q8WU03 294 aa4.54□□□□□ -1.68
SCAF11-213ENST00000550629 CHPT1Q8WUD6 406 aa4.54□□□□□ -1.68
SCAF11-213ENST00000550629 MITD1Q8WV92 249 aa4.54□□□□□ -1.68
SCAF11-213ENST00000550629 RBPMSQ93062 196 aaKnown RBP4.54□□□□□ -1.68
SCAF11-213ENST00000550629 HARBI1Q96MB7 349 aa4.54□□□□□ -1.68
SCAF11-213ENST00000550629 TP53RKQ96S44 253 aa4.54□□□□□ -1.68
SCAF11-213ENST00000550629 CHIAQ9BZP6 476 aa4.54□□□□□ -1.68
SCAF11-213ENST00000550629 NPFFR1Q9GZQ6 430 aa4.54□□□□□ -1.68
SCAF11-213ENST00000550629 GPN1Q9HCN4 374 aaPredicted RBP4.54□□□□□ -1.68
SCAF11-213ENST00000550629 ESM1Q9NQ30 184 aa4.54□□□□□ -1.68
SCAF11-213ENST00000550629 PLSCR3Q9NRY6 295 aa4.54□□□□□ -1.68
SCAF11-213ENST00000550629 KIAA1456Q9P272 454 aa4.54□□□□□ -1.68
SCAF11-213ENST00000550629 SHPKQ9UHJ6 478 aa4.54□□□□□ -1.68
SCAF11-213ENST00000550629 FLVCR2Q9UPI3 526 aa4.54□□□□□ -1.68
SCAF11-213ENST00000550629 TRAV6A0A075B6T7 132 aa4.53□□□□□ -1.68
SCAF11-213ENST00000550629 NCBP2LA6PVI3 153 aaKnown RBP4.53□□□□□ -1.68
SCAF11-213ENST00000550629 SNRPGP15A8MWD9 76 aa4.53□□□□□ -1.68
SCAF11-213ENST00000550629 INMT-MINDY4F8WBC2 141 aa4.53□□□□□ -1.68
SCAF11-213ENST00000550629 CHST1O43916 411 aa4.53□□□□□ -1.68
SCAF11-213ENST00000550629 OR2A4O95047 310 aa4.53□□□□□ -1.68
SCAF11-213ENST00000550629 S1PR2O95136 353 aa4.53□□□□□ -1.68
SCAF11-213ENST00000550629 IGLV2-23P01705 113 aa4.53□□□□□ -1.68
SCAF11-213ENST00000550629 HLA-DRB1P01911 266 aa4.53□□□□□ -1.68
SCAF11-213ENST00000550629 CRYGBP07316 175 aa4.53□□□□□ -1.68
SCAF11-213ENST00000550629 P0C879 139 aa4.53□□□□□ -1.68
SCAF11-213ENST00000550629 ANXA7P20073 488 aaKnown RBP4.53□□□□□ -1.68
SCAF11-213ENST00000550629 CD24P25063 80 aa4.53□□□□□ -1.68
SCAF11-213ENST00000550629 PAX6P26367 422 aa4.53□□□□□ -1.68
SCAF11-213ENST00000550629 MAS1LP35410 378 aa4.53□□□□□ -1.68
SCAF11-213ENST00000550629 RAB25P57735 213 aa4.53□□□□□ -1.68
SCAF11-213ENST00000550629 FAM3BP58499 235 aaPredicted RBP4.53□□□□□ -1.68
SCAF11-213ENST00000550629 DHRS2Q13268 280 aa4.53□□□□□ -1.68
SCAF11-213ENST00000550629 HNF4GQ14541 408 aa4.53□□□□□ -1.68
SCAF11-213ENST00000550629 TMEM187Q14656 261 aa4.53□□□□□ -1.68
SCAF11-213ENST00000550629 C5orf64Q2M2E5 130 aa4.53□□□□□ -1.68
SCAF11-213ENST00000550629 TRIM16LQ309B1 348 aa4.53□□□□□ -1.68
SCAF11-213ENST00000550629 SP6Q3SY56 376 aa4.53□□□□□ -1.68
SCAF11-213ENST00000550629 AARDQ4LEZ3 155 aa4.53□□□□□ -1.68
SCAF11-213ENST00000550629 OR2B11Q5JQS5 317 aa4.53□□□□□ -1.68
SCAF11-213ENST00000550629 LIN54Q6MZP7 749 aa4.53□□□□□ -1.68
SCAF11-213ENST00000550629 CCBE1Q6UXH8 406 aaPredicted RBP4.53□□□□□ -1.68
SCAF11-213ENST00000550629 PPP1R27Q86WC6 154 aa4.53□□□□□ -1.68
SCAF11-213ENST00000550629 TMEM219Q86XT9 240 aa4.53□□□□□ -1.68
SCAF11-213ENST00000550629 ZNF695Q8IW36 515 aa4.53□□□□□ -1.68
SCAF11-213ENST00000550629 PUSL1Q8N0Z8 303 aaKnown RBP4.53□□□□□ -1.68
SCAF11-213ENST00000550629 Q8N2B8 174 aa4.53□□□□□ -1.68
SCAF11-213ENST00000550629 C5orf56Q8N8D9 126 aa4.53□□□□□ -1.68
SCAF11-213ENST00000550629 Q8N9W7 124 aa4.53□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 48.9 ms