RNA–Protein interactions for RNA: ENST00000550016.5

DDX54-207, Transcript of DEAD-box helicase 54, humanhuman

TSL 5

Gene DDX54, Length 594 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX54-207ENST00000550016 NOTCH3Q9UM47 2321 aa15□□□□□ -0.01
DDX54-207ENST00000550016 FBN3Q75N90 2809 aa15□□□□□ -0.01
DDX54-207ENST00000550016 TRBV9A0A0B4J1U6 114 aa15□□□□□ -0.01
DDX54-207ENST00000550016 IGLC7A0M8Q6 106 aa15□□□□□ -0.01
DDX54-207ENST00000550016 IGHV3-11P01762 117 aa15□□□□□ -0.01
DDX54-207ENST00000550016 CRYGCP07315 174 aa15□□□□□ -0.01
DDX54-207ENST00000550016 LGALS1P09382 135 aaKnown RBP15□□□□□ -0.01
DDX54-207ENST00000550016 CD33P20138 364 aa15□□□□□ -0.01
DDX54-207ENST00000550016 SUPT4H1P63272 117 aaKnown RBP15□□□□□ -0.01
DDX54-207ENST00000550016 MRPL41Q8IXM3 137 aaKnown RBP15□□□□□ -0.01
DDX54-207ENST00000550016 SELENOHQ8IZQ5 122 aaKnown RBP15□□□□□ -0.01
DDX54-207ENST00000550016 LINC00482Q8N8I6 264 aa15□□□□□ -0.01
DDX54-207ENST00000550016 OR5B3Q8NH48 314 aa15□□□□□ -0.01
DDX54-207ENST00000550016 RBPMSQ93062 196 aaKnown RBP15□□□□□ -0.01
DDX54-207ENST00000550016 USMG5Q96IX5 58 aa15□□□□□ -0.01
DDX54-207ENST00000550016 TMEM56Q96MV1 263 aa15□□□□□ -0.01
DDX54-207ENST00000550016 TMEM56-RWDD3S4R434 201 aa15□□□□□ -0.01
DDX54-207ENST00000550016 DBX1A6NMT0 343 aa14.99□□□□□ -0.01
DDX54-207ENST00000550016 PLA2G10O15496 165 aa14.99□□□□□ -0.01
DDX54-207ENST00000550016 NDUFB6O95139 128 aa14.99□□□□□ -0.01
DDX54-207ENST00000550016 DHFRP00374 187 aa14.99□□□□□ -0.01
DDX54-207ENST00000550016 PRH1P02810 166 aa14.99□□□□□ -0.01
DDX54-207ENST00000550016 CTRB1P17538 263 aa14.99□□□□□ -0.01
DDX54-207ENST00000550016 TMEM187Q14656 261 aa14.99□□□□□ -0.01
DDX54-207ENST00000550016 ZNF846Q147U1 533 aa14.99□□□□□ -0.01
DDX54-207ENST00000550016 IZUMO4Q1ZYL8 232 aa14.99□□□□□ -0.01
DDX54-207ENST00000550016 TMEM128Q5BJH2 165 aa14.99□□□□□ -0.01
DDX54-207ENST00000550016 CTRB2Q6GPI1 263 aa14.99□□□□□ -0.01
DDX54-207ENST00000550016 HSD17B13Q7Z5P4 300 aaPredicted RBP14.99□□□□□ -0.01
DDX54-207ENST00000550016 OR11H1Q8NG94 326 aa14.99□□□□□ -0.01
DDX54-207ENST00000550016 OR10W1Q8NGF6 305 aa14.99□□□□□ -0.01
DDX54-207ENST00000550016 OR1N2Q8NGR9 330 aa14.99□□□□□ -0.01
DDX54-207ENST00000550016 RNASE11Q8TAA1 199 aaKnown RBP14.99□□□□□ -0.01
DDX54-207ENST00000550016 LHFPL5Q8TAF8 219 aa14.99□□□□□ -0.01
DDX54-207ENST00000550016 HINT2Q9BX68 163 aa14.99□□□□□ -0.01
DDX54-207ENST00000550016 WDR12Q9GZL7 423 aaKnown RBP14.99□□□□□ -0.01
DDX54-207ENST00000550016 FAM223BA6NKX1 122 aa14.98□□□□□ -0.01
DDX54-207ENST00000550016 RBMXL2O75526 392 aaKnown RBP14.98□□□□□ -0.01
DDX54-207ENST00000550016 REG1AP05451 166 aa14.98□□□□□ -0.01
DDX54-207ENST00000550016 ANXA3P12429 323 aa14.98□□□□□ -0.01
DDX54-207ENST00000550016 RHOGP84095 191 aa14.98□□□□□ -0.01
DDX54-207ENST00000550016 ZNF616Q08AN1 781 aa14.98□□□□□ -0.01
DDX54-207ENST00000550016 TMEM268Q5VZI3 342 aa14.98□□□□□ -0.01
DDX54-207ENST00000550016 FAM219AQ8IW50 185 aa14.98□□□□□ -0.01
DDX54-207ENST00000550016 FAM223AQ8IWN6 122 aa14.98□□□□□ -0.01
DDX54-207ENST00000550016 CENPSQ8N2Z9 138 aa14.98□□□□□ -0.01
DDX54-207ENST00000550016 NECAP1Q8NC96 275 aa14.98□□□□□ -0.01
DDX54-207ENST00000550016 DPF1Q92782 380 aa14.98□□□□□ -0.01
DDX54-207ENST00000550016 IL22RA2Q969J5 263 aa14.98□□□□□ -0.01
DDX54-207ENST00000550016 ALX4Q9H161 411 aaPredicted RBP14.98□□□□□ -0.01
DDX54-207ENST00000550016 A0A0B4J293 547 aa14.97□□□□□ -0.01
DDX54-207ENST00000550016 OR13C7P0DN81 318 aa14.97□□□□□ -0.01
DDX54-207ENST00000550016 DEFA4P12838 97 aa14.97□□□□□ -0.01
DDX54-207ENST00000550016 HIST1H1BP16401 226 aaKnown RBP14.97□□□□□ -0.01
DDX54-207ENST00000550016 BTCP35070 178 aa14.97□□□□□ -0.01
DDX54-207ENST00000550016 HSPE1P61604 102 aaKnown RBP14.97□□□□□ -0.01
DDX54-207ENST00000550016 FHL3Q13643 280 aa14.97□□□□□ -0.01
DDX54-207ENST00000550016 KLK9Q2XQG4 91 aa14.97□□□□□ -0.01
DDX54-207ENST00000550016 ZNF429Q86V71 674 aa14.97□□□□□ -0.01
DDX54-207ENST00000550016 LSM10Q969L4 123 aaKnown RBP14.97□□□□□ -0.01
DDX54-207ENST00000550016 KLK9Q9UKQ9 250 aa14.97□□□□□ -0.01
DDX54-207ENST00000550016 A0A0G2JRQ6 117 aa14.96□□□□□ -0.01
DDX54-207ENST00000550016 LYRM1O43325 122 aa14.96□□□□□ -0.01
DDX54-207ENST00000550016 HSPB1P04792 205 aaKnown RBP14.96□□□□□ -0.01
DDX54-207ENST00000550016 OR8U8P0C7N1 319 aa14.96□□□□□ -0.01
DDX54-207ENST00000550016 RAB25P57735 213 aa14.96□□□□□ -0.01
DDX54-207ENST00000550016 SRPXP78539 464 aa14.96□□□□□ -0.01
DDX54-207ENST00000550016 DEFA5Q01523 94 aa14.96□□□□□ -0.01
DDX54-207ENST00000550016 ATP5G2Q06055 141 aa14.96□□□□□ -0.01
DDX54-207ENST00000550016 WT1-ASQ06250 92 aa14.96□□□□□ -0.01
DDX54-207ENST00000550016 ZNF343Q6P1L6 599 aa14.96□□□□□ -0.01
DDX54-207ENST00000550016 C19orf35Q6ZS72 473 aa14.96□□□□□ -0.01
DDX54-207ENST00000550016 LGI3Q8N145 548 aa14.96□□□□□ -0.01
DDX54-207ENST00000550016 FANCD2OSQ96PS1 177 aa14.96□□□□□ -0.01
DDX54-207ENST00000550016 PRR13Q9NZ81 148 aa14.96□□□□□ -0.01
DDX54-207ENST00000550016 FBXL7Q9UJT9 491 aa14.96□□□□□ -0.01
DDX54-207ENST00000550016 PIGBOS1A0A0B4J2F0 54 aa14.95□□□□□ -0.02
DDX54-207ENST00000550016 LINC01619G3V211 115 aa14.95□□□□□ -0.02
DDX54-207ENST00000550016 OR2J3O76001 311 aa14.95□□□□□ -0.02
DDX54-207ENST00000550016 VAMP1P23763 118 aa14.95□□□□□ -0.02
DDX54-207ENST00000550016 MECP2P51608 486 aaKnown RBP14.95□□□□□ -0.02
DDX54-207ENST00000550016 UBE2MP61081 183 aaKnown RBP14.95□□□□□ -0.02
DDX54-207ENST00000550016 PRCDQ00LT1 54 aa14.95□□□□□ -0.02
DDX54-207ENST00000550016 RCC1LQ96I51 464 aaKnown RBP14.95□□□□□ -0.02
DDX54-207ENST00000550016 CMYA5Q8N3K9 4069 aa14.95□□□□□ -0.02
DDX54-207ENST00000550016 CYB5BO43169 146 aa14.94□□□□□ -0.02
DDX54-207ENST00000550016 ST8SIA3O43173 380 aa14.94□□□□□ -0.02
DDX54-207ENST00000550016 Q6ZRM9 215 aa14.94□□□□□ -0.02
DDX54-207ENST00000550016 SLC35G3Q8N808 338 aa14.94□□□□□ -0.02
DDX54-207ENST00000550016 GPR146Q96CH1 333 aa14.94□□□□□ -0.02
DDX54-207ENST00000550016 RANGRFQ9HD47 186 aaPredicted RBP14.94□□□□□ -0.02
DDX54-207ENST00000550016 CTNNBIP1Q9NSA3 81 aaPredicted RBP14.94□□□□□ -0.02
DDX54-207ENST00000550016 FLVCR2Q9UPI3 526 aa14.94□□□□□ -0.02
DDX54-207ENST00000550016 NOTCH1P46531 2555 aa14.94□□□□□ -0.02
DDX54-207ENST00000550016 IGLV11-55A0A075B6I3 123 aa14.93□□□□□ -0.02
DDX54-207ENST00000550016 IGHV4OR15-8A0A075B7B6 117 aa14.93□□□□□ -0.02
DDX54-207ENST00000550016 A0A087WW49 117 aa14.93□□□□□ -0.02
DDX54-207ENST00000550016 A0A0B4J2A0 478 aa14.93□□□□□ -0.02
DDX54-207ENST00000550016 ANKRD34BA5PLL1 514 aa14.93□□□□□ -0.02
DDX54-207ENST00000550016 NDUFB8O95169 186 aa14.93□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 44.3 ms