RNA–Protein interactions for RNA: ENST00000547825.5

LIMA1-203, Transcript of LIM domain and actin binding 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene LIMA1, Length 3,920 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMA1-203ENST00000547825 NAA38Q9BRA0 125 aaKnown RBP4.61□□□□□ -1.67
LIMA1-203ENST00000547825 QTRT1Q9BXR0 403 aaKnown RBP4.61□□□□□ -1.67
LIMA1-203ENST00000547825 RNF122Q9H9V4 155 aa4.61□□□□□ -1.67
LIMA1-203ENST00000547825 SEBOXQ9HB31 216 aaPredicted RBP4.61□□□□□ -1.67
LIMA1-203ENST00000547825 B3GAT1Q9P2W7 334 aa4.61□□□□□ -1.67
LIMA1-203ENST00000547825 PXMP4Q9Y6I8 212 aa4.61□□□□□ -1.67
LIMA1-203ENST00000547825 A0A087WWC5 75 aa4.6□□□□□ -1.67
LIMA1-203ENST00000547825 LOC390937A0A1W2PQ73 354 aa4.6□□□□□ -1.67
LIMA1-203ENST00000547825 FAM181BA6NEQ2 426 aa4.6□□□□□ -1.67
LIMA1-203ENST00000547825 RRHO14718 337 aa4.6□□□□□ -1.67
LIMA1-203ENST00000547825 PDE6DO43924 150 aa4.6□□□□□ -1.67
LIMA1-203ENST00000547825 MT-CO3P00414 261 aa4.6□□□□□ -1.67
LIMA1-203ENST00000547825 IGHEP01854 428 aa4.6□□□□□ -1.67
LIMA1-203ENST00000547825 RAC3P60763 192 aa4.6□□□□□ -1.67
LIMA1-203ENST00000547825 CFHR1Q03591 330 aa4.6□□□□□ -1.67
LIMA1-203ENST00000547825 ZFP36L1Q07352 338 aaKnown RBP4.6□□□□□ -1.67
LIMA1-203ENST00000547825 LDLRAD2Q5SZI1 272 aa4.6□□□□□ -1.67
LIMA1-203ENST00000547825 CARFQ8N187 725 aa4.6□□□□□ -1.67
LIMA1-203ENST00000547825 OR2Z1Q8NG97 314 aa4.6□□□□□ -1.67
LIMA1-203ENST00000547825 LEAP2Q969E1 77 aa4.6□□□□□ -1.67
LIMA1-203ENST00000547825 SFRP2Q96HF1 295 aa4.6□□□□□ -1.67
LIMA1-203ENST00000547825 OR8B2Q96RD0 313 aa4.6□□□□□ -1.67
LIMA1-203ENST00000547825 DERL1Q9BUN8 251 aa4.6□□□□□ -1.67
LIMA1-203ENST00000547825 SH2D2AQ9NP31 389 aa4.6□□□□□ -1.67
LIMA1-203ENST00000547825 TMEM106BQ9NUM4 274 aa4.6□□□□□ -1.67
LIMA1-203ENST00000547825 TMEM38BQ9NVV0 291 aa4.6□□□□□ -1.67
LIMA1-203ENST00000547825 GAGE10A6NGK3 116 aa4.6□□□□□ -1.67
LIMA1-203ENST00000547825 H0Y980 276 aa4.6□□□□□ -1.67
LIMA1-203ENST00000547825 SPRY3O43610 288 aa4.6□□□□□ -1.67
LIMA1-203ENST00000547825 S1PR2O95136 353 aa4.6□□□□□ -1.67
LIMA1-203ENST00000547825 IGKV3-11P04433 115 aa4.6□□□□□ -1.67
LIMA1-203ENST00000547825 OPRK1P41145 380 aa4.6□□□□□ -1.67
LIMA1-203ENST00000547825 EXT1Q16394 746 aa4.6□□□□□ -1.67
LIMA1-203ENST00000547825 FAM27BQ5VT28 67 aa4.6□□□□□ -1.67
LIMA1-203ENST00000547825 FNDC7Q5VTL7 733 aa4.6□□□□□ -1.67
LIMA1-203ENST00000547825 OR4B1Q8NGF8 309 aa4.6□□□□□ -1.67
LIMA1-203ENST00000547825 TAAR6Q96RI8 345 aa4.6□□□□□ -1.67
LIMA1-203ENST00000547825 DEPPQ9NTK1 212 aa4.6□□□□□ -1.67
LIMA1-203ENST00000547825 OCIAD1Q9NX40 245 aa4.6□□□□□ -1.67
LIMA1-203ENST00000547825 LAMTOR2Q9Y2Q5 125 aa4.6□□□□□ -1.67
LIMA1-203ENST00000547825 FREM1Q5H8C1 2179 aa4.6□□□□□ -1.67
LIMA1-203ENST00000547825 VPS13CQ709C8 3753 aa4.6□□□□□ -1.67
LIMA1-203ENST00000547825 SCO2A0A1W2PP80 73 aa4.6□□□□□ -1.67
LIMA1-203ENST00000547825 IFITM10A6NMD0 228 aa4.6□□□□□ -1.67
LIMA1-203ENST00000547825 CA1P00915 261 aaPredicted RBP4.6□□□□□ -1.67
LIMA1-203ENST00000547825 SRP14P37108 136 aaKnown RBP4.6□□□□□ -1.67
LIMA1-203ENST00000547825 PPOXP50336 477 aa4.6□□□□□ -1.67
LIMA1-203ENST00000547825 DUSP3P51452 185 aaPredicted RBP4.6□□□□□ -1.67
LIMA1-203ENST00000547825 RIPPLY3P57055 190 aa4.6□□□□□ -1.67
LIMA1-203ENST00000547825 ZP4Q12836 540 aa4.6□□□□□ -1.67
LIMA1-203ENST00000547825 TRA2AQ13595 282 aaKnown RBP eCLIP4.6□□□□□ -1.67
LIMA1-203ENST00000547825 Q6ZVH6 145 aa4.6□□□□□ -1.67
LIMA1-203ENST00000547825 LHFPL1Q86WI0 220 aa4.6□□□□□ -1.67
LIMA1-203ENST00000547825 OR8B3Q8NGG8 313 aa4.6□□□□□ -1.67
LIMA1-203ENST00000547825 RND1Q92730 232 aa4.6□□□□□ -1.67
LIMA1-203ENST00000547825 P2RX4Q99571 388 aa4.6□□□□□ -1.67
LIMA1-203ENST00000547825 MIEN1Q9BRT3 115 aa4.6□□□□□ -1.67
LIMA1-203ENST00000547825 C2orf88Q9BSF0 95 aa4.6□□□□□ -1.67
LIMA1-203ENST00000547825 ALKBH7Q9BT30 221 aaPredicted RBP4.6□□□□□ -1.67
LIMA1-203ENST00000547825 STRADBQ9C0K7 418 aa4.6□□□□□ -1.67
LIMA1-203ENST00000547825 PCNX2A6NKB5 2137 aa4.59□□□□□ -1.67
LIMA1-203ENST00000547825 GATA2P23769 480 aaPredicted RBP4.59□□□□□ -1.67
LIMA1-203ENST00000547825 ARR3P36575 388 aa4.59□□□□□ -1.67
LIMA1-203ENST00000547825 C10orf91Q5T1B1 145 aa4.59□□□□□ -1.67
LIMA1-203ENST00000547825 RHBDD2Q6NTF9 364 aa4.59□□□□□ -1.67
LIMA1-203ENST00000547825 WDR73Q6P4I2 378 aa4.59□□□□□ -1.67
LIMA1-203ENST00000547825 PCSK4Q6UW60 755 aa4.59□□□□□ -1.67
LIMA1-203ENST00000547825 OR5A2Q8NGI9 324 aa4.59□□□□□ -1.67
LIMA1-203ENST00000547825 OIT3Q8WWZ8 545 aa4.59□□□□□ -1.67
LIMA1-203ENST00000547825 LYZL4Q96KX0 146 aa4.59□□□□□ -1.67
LIMA1-203ENST00000547825 TMEM191AQ9H0A3 160 aa4.59□□□□□ -1.67
LIMA1-203ENST00000547825 RHBDL1O75783 438 aa4.59□□□□□ -1.67
LIMA1-203ENST00000547825 CNIH1O95406 144 aa4.59□□□□□ -1.67
LIMA1-203ENST00000547825 TFF1P04155 84 aa4.59□□□□□ -1.67
LIMA1-203ENST00000547825 CT45A6P0DMU7 189 aa4.59□□□□□ -1.67
LIMA1-203ENST00000547825 CT45A5P0DMU8 189 aa4.59□□□□□ -1.67
LIMA1-203ENST00000547825 CT45A7P0DMV0 189 aa4.59□□□□□ -1.67
LIMA1-203ENST00000547825 REG1BP48304 166 aa4.59□□□□□ -1.67
LIMA1-203ENST00000547825 NMUP48645 174 aa4.59□□□□□ -1.67
LIMA1-203ENST00000547825 ERHP84090 104 aaKnown RBP4.59□□□□□ -1.67
LIMA1-203ENST00000547825 CT45A1Q5HYN5 189 aa4.59□□□□□ -1.67
LIMA1-203ENST00000547825 IBA57Q5T440 356 aaKnown RBP4.59□□□□□ -1.67
LIMA1-203ENST00000547825 DCAF12Q5T6F0 453 aa4.59□□□□□ -1.67
LIMA1-203ENST00000547825 ZGRF1Q86YA3 2104 aa4.59□□□□□ -1.67
LIMA1-203ENST00000547825 RPP25LQ8N5L8 163 aaKnown RBP4.59□□□□□ -1.67
LIMA1-203ENST00000547825 OR5R1Q8NH85 324 aa4.59□□□□□ -1.67
LIMA1-203ENST00000547825 CT45A3Q8NHU0 189 aa4.59□□□□□ -1.67
LIMA1-203ENST00000547825 PERPQ96FX8 193 aa4.59□□□□□ -1.67
LIMA1-203ENST00000547825 WDYHV1Q96HA8 205 aa4.59□□□□□ -1.67
LIMA1-203ENST00000547825 SCRT1Q9BWW7 348 aa4.59□□□□□ -1.67
LIMA1-203ENST00000547825 RNASE7Q9H1E1 156 aaKnown RBP4.59□□□□□ -1.67
LIMA1-203ENST00000547825 HES4Q9HCC6 221 aa4.59□□□□□ -1.67
LIMA1-203ENST00000547825 NRN1Q9NPD7 142 aa4.59□□□□□ -1.67
LIMA1-203ENST00000547825 ZNF355PQ9NSJ1 428 aa4.59□□□□□ -1.67
LIMA1-203ENST00000547825 IGKV1-12A0A0C4DH73 117 aa4.59□□□□□ -1.68
LIMA1-203ENST00000547825 TMEM250H0YL14 139 aa4.59□□□□□ -1.68
LIMA1-203ENST00000547825 CXorf1O96002 111 aa4.59□□□□□ -1.68
LIMA1-203ENST00000547825 IGKV1D-12P01611 117 aa4.59□□□□□ -1.68
LIMA1-203ENST00000547825 IFI6P09912 130 aa4.59□□□□□ -1.68
LIMA1-203ENST00000547825 CT45A10P0DMU9 189 aa4.59□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 98.8 ms