RNA–Protein interactions for RNA: ENST00000540469.5

SFSWAP-209, Transcript of splicing factor SWAP, humanhuman

TSL 3

Gene SFSWAP, Length 3,536 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-209ENST00000540469 TFF1P04155 84 aa10.68□□□□□ -0.7
SFSWAP-209ENST00000540469 OR10J4P0C629 311 aa10.68□□□□□ -0.7
SFSWAP-209ENST00000540469 SSTR5P35346 364 aa10.68□□□□□ -0.7
SFSWAP-209ENST00000540469 MFAP2P55001 183 aa10.68□□□□□ -0.7
SFSWAP-209ENST00000540469 ZNF718Q3SXZ3 478 aa10.68□□□□□ -0.7
SFSWAP-209ENST00000540469 TEPPQ6URK8 271 aa10.68□□□□□ -0.7
SFSWAP-209ENST00000540469 NUDT10Q8NFP7 164 aa10.68□□□□□ -0.7
SFSWAP-209ENST00000540469 OR5B3Q8NH48 314 aa10.68□□□□□ -0.7
SFSWAP-209ENST00000540469 FAM216AQ8WUB2 273 aa10.68□□□□□ -0.7
SFSWAP-209ENST00000540469 POM121L2Q96KW2 1035 aa10.68□□□□□ -0.7
SFSWAP-209ENST00000540469 PHF7Q9BWX1 381 aaPredicted RBP10.68□□□□□ -0.7
SFSWAP-209ENST00000540469 OBP2BQ9NPH6 170 aa10.68□□□□□ -0.7
SFSWAP-209ENST00000540469 IGHV1-69-2A0A0G2JMI3 117 aa10.68□□□□□ -0.7
SFSWAP-209ENST00000540469 OOEPA6NGQ2 149 aa10.68□□□□□ -0.7
SFSWAP-209ENST00000540469 FOLR3P41439 243 aa10.68□□□□□ -0.7
SFSWAP-209ENST00000540469 PRR27Q6MZM9 219 aa10.68□□□□□ -0.7
SFSWAP-209ENST00000540469 C16orf54Q6UWD8 224 aa10.68□□□□□ -0.7
SFSWAP-209ENST00000540469 C5orf30Q96GV9 206 aa10.68□□□□□ -0.7
SFSWAP-209ENST00000540469 M0R1X1 148 aa10.67□□□□□ -0.7
SFSWAP-209ENST00000540469 PSPNO60542 156 aa10.67□□□□□ -0.7
SFSWAP-209ENST00000540469 MIR17HGQ75NE6 70 aa10.67□□□□□ -0.7
SFSWAP-209ENST00000540469 MBNL3Q9NUK0 354 aaKnown RBP10.67□□□□□ -0.7
SFSWAP-209ENST00000540469 K7EP13 123 aa10.67□□□□□ -0.7
SFSWAP-209ENST00000540469 UBE2G1P62253 170 aa10.67□□□□□ -0.7
SFSWAP-209ENST00000540469 TNXAQ16473 311 aa10.67□□□□□ -0.7
SFSWAP-209ENST00000540469 TMEM249Q2WGJ8 235 aa10.67□□□□□ -0.7
SFSWAP-209ENST00000540469 PRR31Q5SQ13 230 aa10.67□□□□□ -0.7
SFSWAP-209ENST00000540469 ASPHD1Q5U4P2 390 aa10.67□□□□□ -0.7
SFSWAP-209ENST00000540469 Q8N7P7 452 aa10.67□□□□□ -0.7
SFSWAP-209ENST00000540469 IGHV2-26A0A0B4J1V2 119 aa10.67□□□□□ -0.7
SFSWAP-209ENST00000540469 IGHV2-70DA0A0C4DH43 119 aa10.67□□□□□ -0.7
SFSWAP-209ENST00000540469 HSBP1L1C9JCN9 74 aa10.67□□□□□ -0.7
SFSWAP-209ENST00000540469 TOMM40O96008 361 aa10.67□□□□□ -0.7
SFSWAP-209ENST00000540469 FRYQ5TBA9 3013 aa10.66□□□□□ -0.7
SFSWAP-209ENST00000540469 IGLL1P15814 213 aa10.66□□□□□ -0.7
SFSWAP-209ENST00000540469 CLDN18P56856 261 aa10.66□□□□□ -0.7
SFSWAP-209ENST00000540469 OR1C1Q15619 314 aa10.66□□□□□ -0.7
SFSWAP-209ENST00000540469 MPV17L2Q567V2 206 aa10.66□□□□□ -0.7
SFSWAP-209ENST00000540469 WNT9BO14905 357 aa10.66□□□□□ -0.7
SFSWAP-209ENST00000540469 TOX4O94842 621 aa10.66□□□□□ -0.7
SFSWAP-209ENST00000540469 NUDT3O95989 172 aa10.66□□□□□ -0.7
SFSWAP-209ENST00000540469 P0C879 139 aa10.66□□□□□ -0.7
SFSWAP-209ENST00000540469 HOXA4Q00056 320 aaPredicted RBP10.66□□□□□ -0.7
SFSWAP-209ENST00000540469 ZNF826PQ6ZT77 177 aa10.66□□□□□ -0.7
SFSWAP-209ENST00000540469 OR8B2Q96RD0 313 aa10.66□□□□□ -0.7
SFSWAP-209ENST00000540469 CER1O95813 267 aa10.66□□□□□ -0.7
SFSWAP-209ENST00000540469 PSG1P11464 419 aa10.66□□□□□ -0.7
SFSWAP-209ENST00000540469 GPR6P46095 362 aaPredicted RBP10.66□□□□□ -0.7
SFSWAP-209ENST00000540469 SELENOVP59797 346 aa10.66□□□□□ -0.7
SFSWAP-209ENST00000540469 NUDT11Q96G61 164 aa10.66□□□□□ -0.7
SFSWAP-209ENST00000540469 WDR54Q9H977 334 aa10.66□□□□□ -0.7
SFSWAP-209ENST00000540469 TMEM167BQ9NRX6 74 aa10.66□□□□□ -0.7
SFSWAP-209ENST00000540469 KIAA1549Q9HCM3 1950 aa10.65□□□□□ -0.7
SFSWAP-209ENST00000540469 TRAV30A0A087WSZ9 112 aa10.65□□□□□ -0.7
SFSWAP-209ENST00000540469 LOC102723996A0A087X1L8 192 aa10.65□□□□□ -0.7
SFSWAP-209ENST00000540469 SAA2-SAA4A0A096LPE2 208 aa10.65□□□□□ -0.7
SFSWAP-209ENST00000540469 TMEM238C9JI98 176 aa10.65□□□□□ -0.7
SFSWAP-209ENST00000540469 SPINT2O43291 252 aa10.65□□□□□ -0.7
SFSWAP-209ENST00000540469 LINC00869P0C866 280 aa10.65□□□□□ -0.7
SFSWAP-209ENST00000540469 CYB561P49447 251 aa10.65□□□□□ -0.7
SFSWAP-209ENST00000540469 BRWD1-AS2P59051 145 aa10.65□□□□□ -0.7
SFSWAP-209ENST00000540469 NRN1LQ496H8 165 aa10.65□□□□□ -0.7
SFSWAP-209ENST00000540469 PNKDQ8N490 385 aa10.65□□□□□ -0.7
SFSWAP-209ENST00000540469 C18orf32Q8TCD1 76 aa10.65□□□□□ -0.7
SFSWAP-209ENST00000540469 CLEC5AQ9NY25 188 aa10.65□□□□□ -0.7
SFSWAP-209ENST00000540469 FAM181BA6NEQ2 426 aa10.65□□□□□ -0.7
SFSWAP-209ENST00000540469 IGFBP2P18065 325 aa10.65□□□□□ -0.7
SFSWAP-209ENST00000540469 RPL8P62917 257 aaKnown RBP10.65□□□□□ -0.7
SFSWAP-209ENST00000540469 SLAQ13239 276 aa10.65□□□□□ -0.7
SFSWAP-209ENST00000540469 OR2T6Q8NHC8 308 aa10.65□□□□□ -0.7
SFSWAP-209ENST00000540469 TRIB1Q96RU8 372 aa10.65□□□□□ -0.7
SFSWAP-209ENST00000540469 SSBP4Q9BWG4 385 aaPredicted RBP10.65□□□□□ -0.7
SFSWAP-209ENST00000540469 OSTCQ9NRP0 149 aa10.65□□□□□ -0.7
SFSWAP-209ENST00000540469 LY96Q9Y6Y9 160 aa10.65□□□□□ -0.7
SFSWAP-209ENST00000540469 NBEAQ8NFP9 2946 aa10.65□□□□□ -0.71
SFSWAP-209ENST00000540469 PI4KAP42356 2102 aa10.65□□□□□ -0.71
SFSWAP-209ENST00000540469 RIF1Q5UIP0 2472 aaKnown RBP10.65□□□□□ -0.71
SFSWAP-209ENST00000540469 ZNF891A8MT65 544 aaPredicted RBP10.64□□□□□ -0.71
SFSWAP-209ENST00000540469 NPY1RP25929 384 aa10.64□□□□□ -0.71
SFSWAP-209ENST00000540469 PLGLB1Q02325 96 aa10.64□□□□□ -0.71
SFSWAP-209ENST00000540469 ZNF355PQ9NSJ1 428 aa10.64□□□□□ -0.71
SFSWAP-209ENST00000540469 CACNA1HO95180 2353 aa10.64□□□□□ -0.71
SFSWAP-209ENST00000540469 IGLC7A0M8Q6 106 aa10.64□□□□□ -0.71
SFSWAP-209ENST00000540469 TRIP6Q15654 476 aaKnown RBP10.64□□□□□ -0.71
SFSWAP-209ENST00000540469 TRAT1Q6PIZ9 186 aa10.64□□□□□ -0.71
SFSWAP-209ENST00000540469 WDR86Q86TI4 376 aa10.64□□□□□ -0.71
SFSWAP-209ENST00000540469 CST9LQ9H4G1 147 aa10.64□□□□□ -0.71
SFSWAP-209ENST00000540469 SAP30LQ9HAJ7 183 aa10.64□□□□□ -0.71
SFSWAP-209ENST00000540469 BOKQ9UMX3 212 aaPredicted RBP10.64□□□□□ -0.71
SFSWAP-209ENST00000540469 CACNA1EQ15878 2313 aa10.64□□□□□ -0.71
SFSWAP-209ENST00000540469 CCL4P13236 92 aa10.64□□□□□ -0.71
SFSWAP-209ENST00000540469 CA7P43166 264 aa10.64□□□□□ -0.71
SFSWAP-209ENST00000540469 C3AR1Q16581 482 aa10.64□□□□□ -0.71
SFSWAP-209ENST00000540469 TBC1D28Q2M2D7 210 aa10.64□□□□□ -0.71
SFSWAP-209ENST00000540469 OR2Y1Q8NGV0 311 aa10.64□□□□□ -0.71
SFSWAP-209ENST00000540469 NANOS1Q8WY41 292 aaKnown RBP10.64□□□□□ -0.71
SFSWAP-209ENST00000540469 CORO2AQ92828 525 aa10.64□□□□□ -0.71
SFSWAP-209ENST00000540469 C11orf52Q96A22 123 aa10.64□□□□□ -0.71
SFSWAP-209ENST00000540469 TMEM45BQ96B21 275 aa10.64□□□□□ -0.71
SFSWAP-209ENST00000540469 GUCD1Q96NT3 240 aa10.64□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 77.3 ms