RNA–Protein interactions for RNA: ENST00000539952.5

CPSF7-219, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 5

Gene CPSF7, Length 953 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-219ENST00000539952 ZNF92Q03936 586 aa4.78□□□□□ -1.64
CPSF7-219ENST00000539952 PRB3Q04118 309 aaPredicted RBP4.78□□□□□ -1.64
CPSF7-219ENST00000539952 ZNF674Q2M3X9 581 aa4.78□□□□□ -1.64
CPSF7-219ENST00000539952 OR2B11Q5JQS5 317 aa4.78□□□□□ -1.64
CPSF7-219ENST00000539952 CASC10Q5T4H9 136 aa4.78□□□□□ -1.64
CPSF7-219ENST00000539952 OTPQ5XKR4 325 aa4.78□□□□□ -1.64
CPSF7-219ENST00000539952 WDR82Q6UXN9 313 aa4.78□□□□□ -1.64
CPSF7-219ENST00000539952 ZNF788Q6ZQV5 615 aa4.78□□□□□ -1.64
CPSF7-219ENST00000539952 ZNF695Q8IW36 515 aa4.78□□□□□ -1.64
CPSF7-219ENST00000539952 SAXO1Q8IYX7 474 aa4.78□□□□□ -1.64
CPSF7-219ENST00000539952 OSR2Q8N2R0 312 aa4.78□□□□□ -1.64
CPSF7-219ENST00000539952 FGFRL1Q8N441 504 aa4.78□□□□□ -1.64
CPSF7-219ENST00000539952 FAM216BQ8N7L0 139 aa4.78□□□□□ -1.64
CPSF7-219ENST00000539952 FAM213BQ8TBF2 198 aa4.78□□□□□ -1.64
CPSF7-219ENST00000539952 RAB24Q969Q5 203 aa4.78□□□□□ -1.64
CPSF7-219ENST00000539952 PINX1Q96BK5 328 aaKnown RBP4.78□□□□□ -1.64
CPSF7-219ENST00000539952 SGK3Q96BR1 496 aa4.78□□□□□ -1.64
CPSF7-219ENST00000539952 ZNF799Q96GE5 643 aa4.78□□□□□ -1.64
CPSF7-219ENST00000539952 YPEL4Q96NS1 127 aa4.78□□□□□ -1.64
CPSF7-219ENST00000539952 SPACA5Q96QH8 159 aa4.78□□□□□ -1.64
CPSF7-219ENST00000539952 SMIM3Q9BZL3 60 aa4.78□□□□□ -1.64
CPSF7-219ENST00000539952 TMEM222Q9H0R3 208 aa4.78□□□□□ -1.64
CPSF7-219ENST00000539952 SLC2A9Q9NRM0 540 aa4.78□□□□□ -1.64
CPSF7-219ENST00000539952 LYRM2Q9NU23 88 aaPredicted RBP4.78□□□□□ -1.64
CPSF7-219ENST00000539952 DOK5Q9P104 306 aa4.78□□□□□ -1.64
CPSF7-219ENST00000539952 TCF19Q9Y242 345 aa4.78□□□□□ -1.64
CPSF7-219ENST00000539952 RCL1Q9Y2P8 373 aaKnown RBP4.78□□□□□ -1.64
CPSF7-219ENST00000539952 UBE2J1Q9Y385 318 aaPredicted RBP4.78□□□□□ -1.64
CPSF7-219ENST00000539952 PUS1Q9Y606 427 aaKnown RBP eCLIP4.78□□□□□ -1.64
CPSF7-219ENST00000539952 TRBV24-1A0A075B6N3 115 aa4.77□□□□□ -1.65
CPSF7-219ENST00000539952 A0A1W2PRX2 142 aa4.77□□□□□ -1.65
CPSF7-219ENST00000539952 A6NDX4 124 aa4.77□□□□□ -1.65
CPSF7-219ENST00000539952 NKX6-3A6NJ46 265 aa4.77□□□□□ -1.65
CPSF7-219ENST00000539952 CDIPTO14735 213 aa4.77□□□□□ -1.65
CPSF7-219ENST00000539952 XRCC2O43543 280 aa4.77□□□□□ -1.65
CPSF7-219ENST00000539952 SYNGR1O43759 233 aa4.77□□□□□ -1.65
CPSF7-219ENST00000539952 CHST1O43916 411 aa4.77□□□□□ -1.65
CPSF7-219ENST00000539952 PDCD6O75340 191 aa4.77□□□□□ -1.65
CPSF7-219ENST00000539952 RHBDL1O75783 438 aa4.77□□□□□ -1.65
CPSF7-219ENST00000539952 GCGP01275 180 aa4.77□□□□□ -1.65
CPSF7-219ENST00000539952 IGLV1-40P01703 118 aa4.77□□□□□ -1.65
CPSF7-219ENST00000539952 OR5AC1P0C628 307 aa4.77□□□□□ -1.65
CPSF7-219ENST00000539952 OR13C7P0DN81 318 aa4.77□□□□□ -1.65
CPSF7-219ENST00000539952 GABRR1P24046 479 aa4.77□□□□□ -1.65
CPSF7-219ENST00000539952 ATP6V0CP27449 155 aa4.77□□□□□ -1.65
CPSF7-219ENST00000539952 VDAC2P45880 294 aaPredicted RBP4.77□□□□□ -1.65
CPSF7-219ENST00000539952 RND2P52198 227 aa4.77□□□□□ -1.65
CPSF7-219ENST00000539952 DLX1P56177 255 aa4.77□□□□□ -1.65
CPSF7-219ENST00000539952 TAS2R30P59541 319 aa4.77□□□□□ -1.65
CPSF7-219ENST00000539952 OR2B8PP59922 312 aa4.77□□□□□ -1.65
CPSF7-219ENST00000539952 BLCAPP62952 87 aa4.77□□□□□ -1.65
CPSF7-219ENST00000539952 DLK1P80370 383 aa4.77□□□□□ -1.65
CPSF7-219ENST00000539952 NHLH2Q02577 135 aa4.77□□□□□ -1.65
CPSF7-219ENST00000539952 HNF4GQ14541 408 aa4.77□□□□□ -1.65
CPSF7-219ENST00000539952 KIR2DS1Q14954 304 aa4.77□□□□□ -1.65
CPSF7-219ENST00000539952 ELOBQ15370 118 aa4.77□□□□□ -1.65
CPSF7-219ENST00000539952 MPV17LQ2QL34 196 aa4.77□□□□□ -1.65
CPSF7-219ENST00000539952 IGSF11Q5DX21 431 aa4.77□□□□□ -1.65
CPSF7-219ENST00000539952 HCP5Q6MZN7 132 aa4.77□□□□□ -1.65
CPSF7-219ENST00000539952 TMEM182Q6ZP80 229 aaPredicted RBP4.77□□□□□ -1.65
CPSF7-219ENST00000539952 C6orf201Q7Z4U5 140 aa4.77□□□□□ -1.65
CPSF7-219ENST00000539952 LYZL2Q7Z4W2 148 aa4.77□□□□□ -1.65
CPSF7-219ENST00000539952 LINC00596Q86U02 117 aa4.77□□□□□ -1.65
CPSF7-219ENST00000539952 CALHM1Q8IU99 346 aa4.77□□□□□ -1.65
CPSF7-219ENST00000539952 CMTM1Q8IZ96 169 aa4.77□□□□□ -1.65
CPSF7-219ENST00000539952 HSD17B11Q8NBQ5 300 aa4.77□□□□□ -1.65
CPSF7-219ENST00000539952 Q8NFD4 153 aa4.77□□□□□ -1.65
CPSF7-219ENST00000539952 MUC7Q8TAX7 377 aa4.77□□□□□ -1.65
CPSF7-219ENST00000539952 SCGB1C1Q8TD33 95 aa4.77□□□□□ -1.65
CPSF7-219ENST00000539952 MBD3L1Q8WWY6 194 aa4.77□□□□□ -1.65
CPSF7-219ENST00000539952 NOL4LQ96MY1 436 aaPredicted RBP4.77□□□□□ -1.65
CPSF7-219ENST00000539952 RAB40CQ96S21 281 aa4.77□□□□□ -1.65
CPSF7-219ENST00000539952 PSMG3Q9BT73 122 aaPredicted RBP4.77□□□□□ -1.65
CPSF7-219ENST00000539952 PARD6GQ9BYG4 376 aaPredicted RBP4.77□□□□□ -1.65
CPSF7-219ENST00000539952 WFDC1Q9HC57 220 aa4.77□□□□□ -1.65
CPSF7-219ENST00000539952 ZNF319Q9P2F9 582 aa4.77□□□□□ -1.65
CPSF7-219ENST00000539952 AK3Q9UIJ7 227 aa4.77□□□□□ -1.65
CPSF7-219ENST00000539952 FBXO7Q9Y3I1 522 aa4.77□□□□□ -1.65
CPSF7-219ENST00000539952 WSB1Q9Y6I7 421 aa4.77□□□□□ -1.65
CPSF7-219ENST00000539952 A0A1B0GU03 582 aa4.76□□□□□ -1.65
CPSF7-219ENST00000539952 A0A1W2PP11 408 aa4.76□□□□□ -1.65
CPSF7-219ENST00000539952 A0A1W2PPE3 182 aa4.76□□□□□ -1.65
CPSF7-219ENST00000539952 SMCO3A2RU48 225 aa4.76□□□□□ -1.65
CPSF7-219ENST00000539952 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP4.76□□□□□ -1.65
CPSF7-219ENST00000539952 HSD17B6O14756 317 aa4.76□□□□□ -1.65
CPSF7-219ENST00000539952 GEMIN2O14893 280 aaKnown RBP4.76□□□□□ -1.65
CPSF7-219ENST00000539952 SOX15O60248 233 aa4.76□□□□□ -1.65
CPSF7-219ENST00000539952 LY86O95711 162 aa4.76□□□□□ -1.65
CPSF7-219ENST00000539952 NRASP01111 189 aa4.76□□□□□ -1.65
CPSF7-219ENST00000539952 MBP02144 154 aa4.76□□□□□ -1.65
CPSF7-219ENST00000539952 TK1P04183 234 aa4.76□□□□□ -1.65
CPSF7-219ENST00000539952 ARG1P05089 322 aa4.76□□□□□ -1.65
CPSF7-219ENST00000539952 HOXD3P31249 432 aaPredicted RBP4.76□□□□□ -1.65
CPSF7-219ENST00000539952 GABRA2P47869 451 aa4.76□□□□□ -1.65
CPSF7-219ENST00000539952 DYNLT3P51808 116 aa4.76□□□□□ -1.65
CPSF7-219ENST00000539952 ERVFRD-1P60508 538 aa4.76□□□□□ -1.65
CPSF7-219ENST00000539952 ATP6V1FQ16864 119 aa4.76□□□□□ -1.65
CPSF7-219ENST00000539952 SNAI3Q3KNW1 292 aa4.76□□□□□ -1.65
CPSF7-219ENST00000539952 TMEM42Q69YG0 159 aa4.76□□□□□ -1.65
CPSF7-219ENST00000539952 STUMQ69YW2 141 aa4.76□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 95.9 ms