RNA–Protein interactions for RNA: ENST00000535399.1

SFSWAP-204, Transcript of splicing factor SWAP, humanhuman

TSL 2

Gene SFSWAP, Length 778 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-204ENST00000535399 GLYATL2Q8WU03 294 aa17.55■□□□□ 0.4
SFSWAP-204ENST00000535399 TMEM222Q9H0R3 208 aa17.55■□□□□ 0.4
SFSWAP-204ENST00000535399 AKIP1Q9NQ31 210 aa17.55■□□□□ 0.4
SFSWAP-204ENST00000535399 NDUFA4L2Q9NRX3 87 aa17.55■□□□□ 0.4
SFSWAP-204ENST00000535399 IGHV4OR15-8A0A075B7B6 117 aa17.54■□□□□ 0.4
SFSWAP-204ENST00000535399 A0A087WW49 117 aa17.54■□□□□ 0.4
SFSWAP-204ENST00000535399 C15orf61A6NNL5 157 aa17.54■□□□□ 0.4
SFSWAP-204ENST00000535399 OR8U8P0C7N1 319 aa17.54■□□□□ 0.4
SFSWAP-204ENST00000535399 TRAPPC2P0DI81 140 aa17.54■□□□□ 0.4
SFSWAP-204ENST00000535399 TRAPPC2BP0DI82 140 aa17.54■□□□□ 0.4
SFSWAP-204ENST00000535399 IZUMO4Q1ZYL8 232 aa17.54■□□□□ 0.4
SFSWAP-204ENST00000535399 KLK9Q2XQG4 91 aa17.54■□□□□ 0.4
SFSWAP-204ENST00000535399 BEAN1Q3B7T3 259 aa17.54■□□□□ 0.4
SFSWAP-204ENST00000535399 KPRPQ5T749 579 aaPredicted RBP17.54■□□□□ 0.4
SFSWAP-204ENST00000535399 THOC7Q6I9Y2 204 aaKnown RBP17.54■□□□□ 0.4
SFSWAP-204ENST00000535399 OR10W1Q8NGF6 305 aa17.54■□□□□ 0.4
SFSWAP-204ENST00000535399 DPF1Q92782 380 aa17.54■□□□□ 0.4
SFSWAP-204ENST00000535399 FANCD2OSQ96PS1 177 aa17.54■□□□□ 0.4
SFSWAP-204ENST00000535399 FKBP11Q9NYL4 201 aa17.54■□□□□ 0.4
SFSWAP-204ENST00000535399 KLK9Q9UKQ9 250 aa17.54■□□□□ 0.4
SFSWAP-204ENST00000535399 FAM223BA6NKX1 122 aa17.53■□□□□ 0.4
SFSWAP-204ENST00000535399 LINC01619G3V211 115 aa17.53■□□□□ 0.4
SFSWAP-204ENST00000535399 CDS2O95674 445 aa17.53■□□□□ 0.4
SFSWAP-204ENST00000535399 HSPB1P04792 205 aaKnown RBP17.53■□□□□ 0.4
SFSWAP-204ENST00000535399 REG1AP05451 166 aa17.53■□□□□ 0.4
SFSWAP-204ENST00000535399 ZNF343Q6P1L6 599 aa17.53■□□□□ 0.4
SFSWAP-204ENST00000535399 LINC00299Q6ZSB3 139 aa17.53■□□□□ 0.4
SFSWAP-204ENST00000535399 FAM223AQ8IWN6 122 aa17.53■□□□□ 0.4
SFSWAP-204ENST00000535399 OR5B3Q8NH48 314 aa17.53■□□□□ 0.4
SFSWAP-204ENST00000535399 LHFPL5Q8TAF8 219 aa17.53■□□□□ 0.4
SFSWAP-204ENST00000535399 OR2J3O76001 311 aa17.52■□□□□ 0.4
SFSWAP-204ENST00000535399 ATG12O94817 140 aa17.52■□□□□ 0.4
SFSWAP-204ENST00000535399 DUS4LO95620 317 aaKnown RBP17.52■□□□□ 0.4
SFSWAP-204ENST00000535399 IL7P13232 177 aa17.52■□□□□ 0.4
SFSWAP-204ENST00000535399 INPP1P49441 399 aa17.52■□□□□ 0.4
SFSWAP-204ENST00000535399 AKR1C2P52895 323 aa17.52■□□□□ 0.4
SFSWAP-204ENST00000535399 DHODHQ02127 395 aa17.52■□□□□ 0.4
SFSWAP-204ENST00000535399 WT1-ASQ06250 92 aa17.52■□□□□ 0.4
SFSWAP-204ENST00000535399 SGPP2Q8IWX5 399 aa17.52■□□□□ 0.4
SFSWAP-204ENST00000535399 NECAP1Q8NC96 275 aa17.52■□□□□ 0.4
SFSWAP-204ENST00000535399 OR4A16Q8NH70 328 aa17.52■□□□□ 0.4
SFSWAP-204ENST00000535399 GALNT14Q96FL9 552 aa17.52■□□□□ 0.4
SFSWAP-204ENST00000535399 SLC25A21Q9BQT8 299 aaPredicted RBP17.52■□□□□ 0.4
SFSWAP-204ENST00000535399 BATF3Q9NR55 127 aa17.52■□□□□ 0.4
SFSWAP-204ENST00000535399 A0A0G2JRQ6 117 aa17.51■□□□□ 0.39
SFSWAP-204ENST00000535399 SLURP1P55000 103 aa17.51■□□□□ 0.39
SFSWAP-204ENST00000535399 SUPT4H1P63272 117 aaKnown RBP17.51■□□□□ 0.39
SFSWAP-204ENST00000535399 SELENOHQ8IZQ5 122 aaKnown RBP17.51■□□□□ 0.39
SFSWAP-204ENST00000535399 HINT2Q9BX68 163 aa17.51■□□□□ 0.39
SFSWAP-204ENST00000535399 A0A0B4J293 547 aa17.5■□□□□ 0.39
SFSWAP-204ENST00000535399 DHFRP00374 187 aa17.5■□□□□ 0.39
SFSWAP-204ENST00000535399 OR13C7P0DN81 318 aa17.5■□□□□ 0.39
SFSWAP-204ENST00000535399 AKR1C4P17516 323 aa17.5■□□□□ 0.39
SFSWAP-204ENST00000535399 DEFA6Q01524 100 aa17.5■□□□□ 0.39
SFSWAP-204ENST00000535399 ATP5G2Q06055 141 aa17.5■□□□□ 0.39
SFSWAP-204ENST00000535399 TMEM187Q14656 261 aa17.5■□□□□ 0.39
SFSWAP-204ENST00000535399 HSD17B13Q7Z5P4 300 aaPredicted RBP17.5■□□□□ 0.39
SFSWAP-204ENST00000535399 DCUN1D4Q92564 292 aa17.5■□□□□ 0.39
SFSWAP-204ENST00000535399 RBPMSQ93062 196 aaKnown RBP17.5■□□□□ 0.39
SFSWAP-204ENST00000535399 LSM10Q969L4 123 aaKnown RBP17.5■□□□□ 0.39
SFSWAP-204ENST00000535399 TMEM56Q96MV1 263 aa17.5■□□□□ 0.39
SFSWAP-204ENST00000535399 MCRIP2Q9BUT9 160 aaKnown RBP17.5■□□□□ 0.39
SFSWAP-204ENST00000535399 PTTG2Q9NZH5 202 aa17.5■□□□□ 0.39
SFSWAP-204ENST00000535399 FBXL7Q9UJT9 491 aa17.5■□□□□ 0.39
SFSWAP-204ENST00000535399 DMRT1Q9Y5R6 373 aa17.5■□□□□ 0.39
SFSWAP-204ENST00000535399 TMEM56-RWDD3S4R434 201 aa17.5■□□□□ 0.39
SFSWAP-204ENST00000535399 DNAH3Q8TD57 4116 aa17.49■□□□□ 0.39
SFSWAP-204ENST00000535399 IGLV11-55A0A075B6I3 123 aa17.49■□□□□ 0.39
SFSWAP-204ENST00000535399 LINC00854A0A1B0GVQ3 168 aa17.49■□□□□ 0.39
SFSWAP-204ENST00000535399 ANKRD34BA5PLL1 514 aa17.49■□□□□ 0.39
SFSWAP-204ENST00000535399 NAP1L6A6NFF2 107 aa17.49■□□□□ 0.39
SFSWAP-204ENST00000535399 NDUFB8O95169 186 aa17.49■□□□□ 0.39
SFSWAP-204ENST00000535399 TRBV12-3P01733 135 aa17.49■□□□□ 0.39
SFSWAP-204ENST00000535399 EXOSC2Q13868 293 aaKnown RBP17.49■□□□□ 0.39
SFSWAP-204ENST00000535399 C15orf32Q32M92 178 aa17.49■□□□□ 0.39
SFSWAP-204ENST00000535399 TMED4Q7Z7H5 227 aa17.49■□□□□ 0.39
SFSWAP-204ENST00000535399 ZNF429Q86V71 674 aa17.49■□□□□ 0.39
SFSWAP-204ENST00000535399 DLX4Q92988 240 aaPredicted RBP17.49■□□□□ 0.39
SFSWAP-204ENST00000535399 RRNAD1Q96FB5 475 aaKnown RBP17.49■□□□□ 0.39
SFSWAP-204ENST00000535399 RANGRFQ9HD47 186 aaPredicted RBP17.49■□□□□ 0.39
SFSWAP-204ENST00000535399 PRR13Q9NZ81 148 aa17.49■□□□□ 0.39
SFSWAP-204ENST00000535399 KCNIP3Q9Y2W7 256 aa17.49■□□□□ 0.39
SFSWAP-204ENST00000535399 DEFA4P12838 97 aa17.48■□□□□ 0.39
SFSWAP-204ENST00000535399 HIST1H1BP16401 226 aaKnown RBP17.48■□□□□ 0.39
SFSWAP-204ENST00000535399 CCR6P51684 374 aa17.48■□□□□ 0.39
SFSWAP-204ENST00000535399 HSPE1P61604 102 aaKnown RBP17.48■□□□□ 0.39
SFSWAP-204ENST00000535399 PEF1Q9UBV8 284 aaKnown RBP17.48■□□□□ 0.39
SFSWAP-204ENST00000535399 BTCP35070 178 aa17.47■□□□□ 0.39
SFSWAP-204ENST00000535399 PRCDQ00LT1 54 aa17.47■□□□□ 0.39
SFSWAP-204ENST00000535399 RBMS2Q15434 407 aaKnown RBP17.47■□□□□ 0.39
SFSWAP-204ENST00000535399 TMEM268Q5VZI3 342 aa17.47■□□□□ 0.39
SFSWAP-204ENST00000535399 Q6ZRM9 215 aa17.47■□□□□ 0.39
SFSWAP-204ENST00000535399 FAM219AQ8IW50 185 aa17.47■□□□□ 0.39
SFSWAP-204ENST00000535399 IL22RA2Q969J5 263 aa17.47■□□□□ 0.39
SFSWAP-204ENST00000535399 C7orf50Q9BRJ6 194 aaKnown RBP17.47■□□□□ 0.39
SFSWAP-204ENST00000535399 GPR61Q9BZJ8 451 aa17.47■□□□□ 0.39
SFSWAP-204ENST00000535399 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP17.46■□□□□ 0.39
SFSWAP-204ENST00000535399 OVOL1O14753 267 aa17.46■□□□□ 0.39
SFSWAP-204ENST00000535399 ST8SIA3O43173 380 aa17.46■□□□□ 0.39
SFSWAP-204ENST00000535399 HOXD3P31249 432 aaPredicted RBP17.46■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 62.9 ms