RNA–Protein interactions for RNA: ENST00000535375.1

PRKDC-205, Transcript of protein kinase, DNA-activated, catalytic subunit, humanhuman

TSL 3

Gene PRKDC, Length 464 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDC-205ENST00000535375 ZNF705DP0CH99 300 aaPredicted RBP1.57□□□□□ -2.16
PRKDC-205ENST00000535375 HINT1P49773 126 aaPredicted RBP1.57□□□□□ -2.16
PRKDC-205ENST00000535375 EMP1P54849 157 aa1.57□□□□□ -2.16
PRKDC-205ENST00000535375 AP3S2P59780 193 aa1.57□□□□□ -2.16
PRKDC-205ENST00000535375 CTAG1AP78358 180 aa1.57□□□□□ -2.16
PRKDC-205ENST00000535375 GRK1Q15835 563 aa1.57□□□□□ -2.16
PRKDC-205ENST00000535375 LPCAT3Q6P1A2 487 aa1.57□□□□□ -2.16
PRKDC-205ENST00000535375 RPP25LQ8N5L8 163 aaKnown RBP1.57□□□□□ -2.16
PRKDC-205ENST00000535375 MRPL30Q8TCC3 161 aaKnown RBP1.57□□□□□ -2.16
PRKDC-205ENST00000535375 DCANP1Q8TF63 244 aa1.57□□□□□ -2.16
PRKDC-205ENST00000535375 ITFG2Q969R8 447 aa1.57□□□□□ -2.16
PRKDC-205ENST00000535375 TSPAN32Q96QS1 320 aa1.57□□□□□ -2.16
PRKDC-205ENST00000535375 WDR61Q9GZS3 305 aaKnown RBP1.57□□□□□ -2.16
PRKDC-205ENST00000535375 PKIGQ9Y2B9 76 aa1.57□□□□□ -2.16
PRKDC-205ENST00000535375 NUP155O75694 1391 aa1.57□□□□□ -2.16
PRKDC-205ENST00000535375 PXDNLA1KZ92 1463 aa1.56□□□□□ -2.16
PRKDC-205ENST00000535375 HMCN1Q96RW7 5635 aa1.56□□□□□ -2.16
PRKDC-205ENST00000535375 IGKV1D-43A0A0B4J1Z2 117 aa1.56□□□□□ -2.16
PRKDC-205ENST00000535375 RFPL4AA6NLU0 287 aa1.56□□□□□ -2.16
PRKDC-205ENST00000535375 RFPL4AL1F8VTS6 287 aa1.56□□□□□ -2.16
PRKDC-205ENST00000535375 H7C2G1 150 aa1.56□□□□□ -2.16
PRKDC-205ENST00000535375 FAAHO00519 579 aa1.56□□□□□ -2.16
PRKDC-205ENST00000535375 PRM2P04554 102 aa1.56□□□□□ -2.16
PRKDC-205ENST00000535375 MSMBP08118 114 aa1.56□□□□□ -2.16
PRKDC-205ENST00000535375 HLA-DMBP28068 263 aa1.56□□□□□ -2.16
PRKDC-205ENST00000535375 RPL5P46777 297 aaKnown RBP1.56□□□□□ -2.16
PRKDC-205ENST00000535375 RELAQ04206 551 aa1.56□□□□□ -2.16
PRKDC-205ENST00000535375 RPL18Q07020 188 aaKnown RBP1.56□□□□□ -2.16
PRKDC-205ENST00000535375 EDDM3AQ14507 147 aa1.56□□□□□ -2.16
PRKDC-205ENST00000535375 IAH1Q2TAA2 248 aaPredicted RBP1.56□□□□□ -2.16
PRKDC-205ENST00000535375 SLC7A6Q92536 515 aa1.56□□□□□ -2.16
PRKDC-205ENST00000535375 DCUN1D1Q96GG9 259 aa1.56□□□□□ -2.16
PRKDC-205ENST00000535375 NIPSNAP1Q9BPW8 284 aa1.56□□□□□ -2.16
PRKDC-205ENST00000535375 CHST6Q9GZX3 395 aa1.56□□□□□ -2.16
PRKDC-205ENST00000535375 TLNRD1Q9H1K6 362 aa1.56□□□□□ -2.16
PRKDC-205ENST00000535375 DCSTAMPQ9H295 470 aa1.56□□□□□ -2.16
PRKDC-205ENST00000535375 PRTFDC1Q9NRG1 225 aa1.56□□□□□ -2.16
PRKDC-205ENST00000535375 IL36BQ9NZH7 164 aa1.56□□□□□ -2.16
PRKDC-205ENST00000535375 TIMM22Q9Y584 194 aa1.56□□□□□ -2.16
PRKDC-205ENST00000535375 SRCAPQ6ZRS2 3230 aa1.56□□□□□ -2.16
PRKDC-205ENST00000535375 TRAV26-2A0A0B4J265 109 aa1.55□□□□□ -2.16
PRKDC-205ENST00000535375 J3QQQ9 107 aa1.55□□□□□ -2.16
PRKDC-205ENST00000535375 CREBL2O60519 120 aaPredicted RBP1.55□□□□□ -2.16
PRKDC-205ENST00000535375 NOS1APO75052 506 aaPredicted RBP1.55□□□□□ -2.16
PRKDC-205ENST00000535375 CNIH1O95406 144 aa1.55□□□□□ -2.16
PRKDC-205ENST00000535375 NAPSAO96009 420 aa1.55□□□□□ -2.16
PRKDC-205ENST00000535375 IGKV1-5P01602 117 aa1.55□□□□□ -2.16
PRKDC-205ENST00000535375 IGHV3-7P01780 117 aa1.55□□□□□ -2.16
PRKDC-205ENST00000535375 RPL26P61254 145 aaKnown RBP1.55□□□□□ -2.16
PRKDC-205ENST00000535375 HIST1H4AP62805 103 aaKnown RBP1.55□□□□□ -2.16
PRKDC-205ENST00000535375 ERHP84090 104 aaKnown RBP1.55□□□□□ -2.16
PRKDC-205ENST00000535375 RUNX1Q01196 453 aa1.55□□□□□ -2.16
PRKDC-205ENST00000535375 GLO1Q04760 184 aa1.55□□□□□ -2.16
PRKDC-205ENST00000535375 IBA57Q5T440 356 aaKnown RBP1.55□□□□□ -2.16
PRKDC-205ENST00000535375 ZNF705AQ6ZN79 300 aaPredicted RBP1.55□□□□□ -2.16
PRKDC-205ENST00000535375 OR8B12Q8NGG6 310 aa1.55□□□□□ -2.16
PRKDC-205ENST00000535375 TP73-AS1Q9UF72 201 aa1.55□□□□□ -2.16
PRKDC-205ENST00000535375 RPL26L1Q9UNX3 145 aaKnown RBP1.55□□□□□ -2.16
PRKDC-205ENST00000535375 TIMM9Q9Y5J7 89 aa1.55□□□□□ -2.16
PRKDC-205ENST00000535375 NCOA1Q15788 1441 aa1.55□□□□□ -2.16
PRKDC-205ENST00000535375 SCAF11Q99590 1463 aaKnown RBP1.55□□□□□ -2.16
PRKDC-205ENST00000535375 TRAV38-1A0A0B4J264 116 aa1.54□□□□□ -2.16
PRKDC-205ENST00000535375 OR4C46A6NHA9 309 aa1.54□□□□□ -2.16
PRKDC-205ENST00000535375 TRAPPC2LH3BP13 241 aa1.54□□□□□ -2.16
PRKDC-205ENST00000535375 C1QCP02747 245 aa1.54□□□□□ -2.16
PRKDC-205ENST00000535375 IFNA6P05013 189 aa1.54□□□□□ -2.16
PRKDC-205ENST00000535375 SULT1A3P0DMM9 295 aa1.54□□□□□ -2.16
PRKDC-205ENST00000535375 SULT1A4P0DMN0 295 aa1.54□□□□□ -2.16
PRKDC-205ENST00000535375 DEFA4P12838 97 aa1.54□□□□□ -2.16
PRKDC-205ENST00000535375 MSNP26038 577 aaKnown RBP1.54□□□□□ -2.16
PRKDC-205ENST00000535375 HAAOP46952 286 aa1.54□□□□□ -2.16
PRKDC-205ENST00000535375 RPS20P60866 119 aaKnown RBP1.54□□□□□ -2.16
PRKDC-205ENST00000535375 MRPS15P82914 257 aaKnown RBP1.54□□□□□ -2.16
PRKDC-205ENST00000535375 KCNJ8Q15842 424 aa1.54□□□□□ -2.16
PRKDC-205ENST00000535375 TMEM97Q5BJF2 176 aa1.54□□□□□ -2.16
PRKDC-205ENST00000535375 Q6ZRN7 208 aaPredicted RBP1.54□□□□□ -2.16
PRKDC-205ENST00000535375 C12orf45Q8N5I9 185 aaPredicted RBP1.54□□□□□ -2.16
PRKDC-205ENST00000535375 OR13C4Q8NGS5 318 aa1.54□□□□□ -2.16
PRKDC-205ENST00000535375 ACOT12Q8WYK0 555 aa1.54□□□□□ -2.16
PRKDC-205ENST00000535375 HSPB9Q9BQS6 159 aa1.54□□□□□ -2.16
PRKDC-205ENST00000535375 DERL1Q9BUN8 251 aa1.54□□□□□ -2.16
PRKDC-205ENST00000535375 C20orf27Q9GZN8 174 aa1.54□□□□□ -2.16
PRKDC-205ENST00000535375 FBXL12Q9NXK8 326 aa1.54□□□□□ -2.16
PRKDC-205ENST00000535375 NAT8Q9UHE5 227 aa1.54□□□□□ -2.16
PRKDC-205ENST00000535375 DENND4BO75064 1496 aaPredicted RBP1.54□□□□□ -2.16
PRKDC-205ENST00000535375 DISP1Q96F81 1524 aa1.54□□□□□ -2.16
PRKDC-205ENST00000535375 MPDZO75970 2070 aa1.54□□□□□ -2.16
PRKDC-205ENST00000535375 A0A0D9SEW6 157 aa1.53□□□□□ -2.16
PRKDC-205ENST00000535375 FAM236DA0A1B0GTK5 79 aa1.53□□□□□ -2.16
PRKDC-205ENST00000535375 A0A1B0GVG6 124 aa1.53□□□□□ -2.16
PRKDC-205ENST00000535375 IRGMA1A4Y4 181 aa1.53□□□□□ -2.16
PRKDC-205ENST00000535375 CCDC144AA2RUR9 1427 aa1.53□□□□□ -2.16
PRKDC-205ENST00000535375 OR51F1A6NGY5 319 aa1.53□□□□□ -2.16
PRKDC-205ENST00000535375 FABP5P3A8MUU1 101 aa1.53□□□□□ -2.16
PRKDC-205ENST00000535375 PGLYRP1O75594 196 aaPredicted RBP1.53□□□□□ -2.16
PRKDC-205ENST00000535375 SERPINA7P05543 415 aa1.53□□□□□ -2.16
PRKDC-205ENST00000535375 FAM236CP0DP71 79 aa1.53□□□□□ -2.16
PRKDC-205ENST00000535375 G6PCP35575 357 aa1.53□□□□□ -2.16
PRKDC-205ENST00000535375 ZNF80P51504 273 aaPredicted RBP1.53□□□□□ -2.16
PRKDC-205ENST00000535375 HIST1H3AP68431 136 aa1.53□□□□□ -2.16
Retrieved 100 of 20,778 RNA–protein pairs in 110.7 ms