RNA–Protein interactions for RNA: ENST00000533961.1

RDX-215, Transcript of radixin, human

TSL 2

Gene RDX, Length 771 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RDX-215	ENST00000533961		A0A1B0GV72	72 aa		0.95	□□□□□ -2.26
RDX-215	ENST00000533961		A0A1B0GW54	56 aa		0.95	□□□□□ -2.26
RDX-215	ENST00000533961	OR6C6	A6NF89	314 aa		0.95	□□□□□ -2.26
RDX-215	ENST00000533961	OR4C46	A6NHA9	309 aa		0.95	□□□□□ -2.26
RDX-215	ENST00000533961	FAM159B	A6NKW6	160 aa		0.95	□□□□□ -2.26
RDX-215	ENST00000533961	SIGLEC16	A6NMB1	481 aa		0.95	□□□□□ -2.26
RDX-215	ENST00000533961	OR4C45	A6NMZ5	311 aa		0.95	□□□□□ -2.26
RDX-215	ENST00000533961		H3BPC8	53 aa		0.95	□□□□□ -2.26
RDX-215	ENST00000533961	FAAH	O00519	579 aa		0.95	□□□□□ -2.26
RDX-215	ENST00000533961	CNIH1	O95406	144 aa		0.95	□□□□□ -2.26
RDX-215	ENST00000533961	CD7	P09564	240 aa		0.95	□□□□□ -2.26
RDX-215	ENST00000533961	FAM228B	P0C875	321 aa		0.95	□□□□□ -2.26
RDX-215	ENST00000533961	LYNX1	P0DP58	116 aa		0.95	□□□□□ -2.26
RDX-215	ENST00000533961	KCNE1	P15382	129 aa		0.95	□□□□□ -2.26
RDX-215	ENST00000533961	CCL1	P22362	96 aa		0.95	□□□□□ -2.26
RDX-215	ENST00000533961	TAS2R45	P59539	299 aa		0.95	□□□□□ -2.26
RDX-215	ENST00000533961	ARPC4	P59998	168 aa		0.95	□□□□□ -2.26
RDX-215	ENST00000533961	HSPE1	P61604	102 aa	Known RBP	0.95	□□□□□ -2.26
RDX-215	ENST00000533961	HOXC5	Q00444	222 aa		0.95	□□□□□ -2.26
RDX-215	ENST00000533961	CAV1	Q03135	178 aa		0.95	□□□□□ -2.26
RDX-215	ENST00000533961	CDK10	Q15131	360 aa		0.95	□□□□□ -2.26
RDX-215	ENST00000533961	MOG	Q16653	247 aa		0.95	□□□□□ -2.26
RDX-215	ENST00000533961	FAM201A	Q5SY85	155 aa		0.95	□□□□□ -2.26
RDX-215	ENST00000533961	TRIQK	Q629K1	86 aa		0.95	□□□□□ -2.26
RDX-215	ENST00000533961	KRTAP5-10	Q6L8G5	202 aa		0.95	□□□□□ -2.26
RDX-215	ENST00000533961	C5orf46	Q6UWT4	87 aa		0.95	□□□□□ -2.26
RDX-215	ENST00000533961	OOSP2	Q86WS3	158 aa		0.95	□□□□□ -2.26
RDX-215	ENST00000533961	C20orf196	Q8IYI0	205 aa		0.95	□□□□□ -2.26
RDX-215	ENST00000533961	CNEP1R1	Q8N9A8	125 aa		0.95	□□□□□ -2.26
RDX-215	ENST00000533961	OR52L1	Q8NGH7	329 aa		0.95	□□□□□ -2.26
RDX-215	ENST00000533961	MCFD2	Q8NI22	146 aa		0.95	□□□□□ -2.26
RDX-215	ENST00000533961	RAB2B	Q8WUD1	216 aa		0.95	□□□□□ -2.26
RDX-215	ENST00000533961	SIGMAR1	Q99720	223 aa		0.95	□□□□□ -2.26
RDX-215	ENST00000533961	CMSS1	Q9BQ75	279 aa	Known RBP	0.95	□□□□□ -2.26
RDX-215	ENST00000533961		Q9BRP9	147 aa		0.95	□□□□□ -2.26
RDX-215	ENST00000533961	KIFC1	Q9BW19	673 aa		0.95	□□□□□ -2.26
RDX-215	ENST00000533961	ZNF471	Q9BX82	626 aa	Predicted RBP	0.95	□□□□□ -2.26
RDX-215	ENST00000533961	PARVB	Q9HBI1	364 aa		0.95	□□□□□ -2.26
RDX-215	ENST00000533961	C19orf12	Q9NSK7	152 aa		0.95	□□□□□ -2.26
RDX-215	ENST00000533961	GID8	Q9NWU2	228 aa		0.95	□□□□□ -2.26
RDX-215	ENST00000533961	TAS2R7	Q9NYW3	318 aa		0.95	□□□□□ -2.26
RDX-215	ENST00000533961	IDI2-AS1	Q9NZ38	188 aa		0.95	□□□□□ -2.26
RDX-215	ENST00000533961	PRO2289	Q9P1D8	64 aa		0.95	□□□□□ -2.26
RDX-215	ENST00000533961	TAAR3P	Q9P1P4	343 aa		0.95	□□□□□ -2.26
RDX-215	ENST00000533961	KLK5	Q9Y337	293 aa	Predicted RBP	0.95	□□□□□ -2.26
RDX-215	ENST00000533961	PRELID3B	Q9Y3B1	194 aa		0.95	□□□□□ -2.26
RDX-215	ENST00000533961	WRN	Q14191	1432 aa	Predicted RBP eCLIP	0.95	□□□□□ -2.26
RDX-215	ENST00000533961	YTHDC2	Q9H6S0	1430 aa	Known RBP	0.95	□□□□□ -2.26
RDX-215	ENST00000533961	RTL1	A6NKG5	1358 aa		0.95	□□□□□ -2.26
RDX-215	ENST00000533961	MTUS2	Q5JR59	1369 aa		0.95	□□□□□ -2.26
RDX-215	ENST00000533961	DSCAM	O60469	2012 aa		0.94	□□□□□ -2.26
RDX-215	ENST00000533961	NEO1	Q92859	1461 aa		0.94	□□□□□ -2.26
RDX-215	ENST00000533961	ARHGAP32	A7KAX9	2087 aa		0.94	□□□□□ -2.26
RDX-215	ENST00000533961	IGHV3-15	A0A0B4J1V0	119 aa		0.94	□□□□□ -2.26
RDX-215	ENST00000533961	IGHV1-69-2	A0A0G2JMI3	117 aa		0.94	□□□□□ -2.26
RDX-215	ENST00000533961	LOC105371267	A0A1B0GV96	52 aa		0.94	□□□□□ -2.26
RDX-215	ENST00000533961	GNG14	A0A1W2PPG7	69 aa		0.94	□□□□□ -2.26
RDX-215	ENST00000533961	hADV38S2	A0JD32	116 aa		0.94	□□□□□ -2.26
RDX-215	ENST00000533961	IGKV2-29	A2NJV5	120 aa	Predicted RBP	0.94	□□□□□ -2.26
RDX-215	ENST00000533961	PPP5D1	E7EU14	171 aa		0.94	□□□□□ -2.26
RDX-215	ENST00000533961	TXNDC9	O14530	226 aa		0.94	□□□□□ -2.26
RDX-215	ENST00000533961	PGLYRP1	O75594	196 aa	Predicted RBP	0.94	□□□□□ -2.26
RDX-215	ENST00000533961	IFNA1	P01562	189 aa		0.94	□□□□□ -2.26
RDX-215	ENST00000533961	IGHV1-69	P01742	117 aa		0.94	□□□□□ -2.26
RDX-215	ENST00000533961	C1QB	P02746	253 aa		0.94	□□□□□ -2.26
RDX-215	ENST00000533961	NBEAP1	P0C6P0	100 aa		0.94	□□□□□ -2.26
RDX-215	ENST00000533961	ZNF728	P0DKX0	622 aa		0.94	□□□□□ -2.26
RDX-215	ENST00000533961	FGF6	P10767	208 aa		0.94	□□□□□ -2.26
RDX-215	ENST00000533961	ATP6V0C	P27449	155 aa		0.94	□□□□□ -2.26
RDX-215	ENST00000533961	CRYBA4	P53673	196 aa		0.94	□□□□□ -2.26
RDX-215	ENST00000533961	RAB4B	P61018	213 aa		0.94	□□□□□ -2.26
RDX-215	ENST00000533961	SNRPD2	P62316	118 aa	Known RBP	0.94	□□□□□ -2.26
RDX-215	ENST00000533961	FKBP1A	P62942	108 aa	Known RBP	0.94	□□□□□ -2.26
RDX-215	ENST00000533961	S100A12	P80511	92 aa		0.94	□□□□□ -2.26
RDX-215	ENST00000533961	TNFAIP6	P98066	277 aa	Predicted RBP	0.94	□□□□□ -2.26
RDX-215	ENST00000533961	TSN	Q15631	228 aa	Known RBP	0.94	□□□□□ -2.26
RDX-215	ENST00000533961	ZNF791	Q3KP31	576 aa	Predicted RBP	0.94	□□□□□ -2.26
RDX-215	ENST00000533961	C9orf64	Q5T6V5	341 aa		0.94	□□□□□ -2.26
RDX-215	ENST00000533961	TBC1D19	Q8N5T2	526 aa		0.94	□□□□□ -2.26
RDX-215	ENST00000533961	OR51A2	Q8NGJ7	313 aa		0.94	□□□□□ -2.26
RDX-215	ENST00000533961	LHFPL5	Q8TAF8	219 aa		0.94	□□□□□ -2.26
RDX-215	ENST00000533961	FNDC9	Q8TBE3	224 aa		0.94	□□□□□ -2.26
RDX-215	ENST00000533961	DYDC1	Q8WWB3	177 aa		0.94	□□□□□ -2.26
RDX-215	ENST00000533961	ROPN1L	Q96C74	230 aa		0.94	□□□□□ -2.26
RDX-215	ENST00000533961	MRPS24	Q96EL2	167 aa	Known RBP	0.94	□□□□□ -2.26
RDX-215	ENST00000533961	CCL13	Q99616	98 aa		0.94	□□□□□ -2.26
RDX-215	ENST00000533961	PHB2	Q99623	299 aa		0.94	□□□□□ -2.26
RDX-215	ENST00000533961	HOPX	Q9BPY8	73 aa	Predicted RBP	0.94	□□□□□ -2.26
RDX-215	ENST00000533961	MIEN1	Q9BRT3	115 aa		0.94	□□□□□ -2.26
RDX-215	ENST00000533961	NKX6-2	Q9C056	277 aa	Predicted RBP	0.94	□□□□□ -2.26
RDX-215	ENST00000533961	C20orf27	Q9GZN8	174 aa		0.94	□□□□□ -2.26
RDX-215	ENST00000533961	PCBD2	Q9H0N5	130 aa		0.94	□□□□□ -2.26
RDX-215	ENST00000533961	RNF122	Q9H9V4	155 aa		0.94	□□□□□ -2.26
RDX-215	ENST00000533961	MRPL40	Q9NQ50	206 aa	Known RBP	0.94	□□□□□ -2.26
RDX-215	ENST00000533961	BIN3	Q9NQY0	253 aa		0.94	□□□□□ -2.26
RDX-215	ENST00000533961	NDUFB11	Q9NX14	153 aa		0.94	□□□□□ -2.26
RDX-215	ENST00000533961	CMTM6	Q9NX76	183 aa		0.94	□□□□□ -2.26
RDX-215	ENST00000533961	RSL24D1	Q9UHA3	163 aa	Known RBP	0.94	□□□□□ -2.26
RDX-215	ENST00000533961	AK3	Q9UIJ7	227 aa		0.94	□□□□□ -2.26
RDX-215	ENST00000533961	PYCARD	Q9ULZ3	195 aa		0.94	□□□□□ -2.26

Retrieved 100 of 20,778 RNA–protein pairs in 90.1 ms