RNA–Protein interactions for RNA: ENST00000528288.5

C11orf54-207, Transcript of chromosome 11 open reading frame 54, humanhuman

TSL 1 (best) BASIC

Gene C11orf54, Length 4,094 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf54-207ENST00000528288 F2Z2F3 143 aa6.11□□□□□ -1.43
C11orf54-207ENST00000528288 SCGB1D1O95968 90 aa6.11□□□□□ -1.43
C11orf54-207ENST00000528288 GCHFRP30047 84 aa6.11□□□□□ -1.43
C11orf54-207ENST00000528288 ADMP35318 185 aa6.11□□□□□ -1.43
C11orf54-207ENST00000528288 PSG5Q15238 335 aa6.11□□□□□ -1.43
C11orf54-207ENST00000528288 KCNIP4Q6PIL6 250 aa6.11□□□□□ -1.43
C11orf54-207ENST00000528288 C1orf162Q8NEQ5 155 aaPredicted RBP6.11□□□□□ -1.43
C11orf54-207ENST00000528288 PPP1R35Q8TAP8 253 aa6.11□□□□□ -1.43
C11orf54-207ENST00000528288 C15orf61A6NNL5 157 aa6.1□□□□□ -1.43
C11orf54-207ENST00000528288 GGCTO75223 188 aaKnown RBP6.1□□□□□ -1.43
C11orf54-207ENST00000528288 IGHV1-46P01743 117 aa6.1□□□□□ -1.43
C11orf54-207ENST00000528288 STAG3L2P0CL84 134 aa6.1□□□□□ -1.43
C11orf54-207ENST00000528288 STAG3L3P0CL85 134 aa6.1□□□□□ -1.43
C11orf54-207ENST00000528288 OPRK1P41145 380 aa6.1□□□□□ -1.43
C11orf54-207ENST00000528288 CNN1P51911 297 aaKnown RBP6.1□□□□□ -1.43
C11orf54-207ENST00000528288 USF2Q15853 346 aaPredicted RBP6.1□□□□□ -1.43
C11orf54-207ENST00000528288 C10orf55Q5SWW7 151 aa6.1□□□□□ -1.43
C11orf54-207ENST00000528288 TEPPQ6URK8 271 aa6.1□□□□□ -1.43
C11orf54-207ENST00000528288 DOLPP1Q86YN1 238 aa6.1□□□□□ -1.43
C11orf54-207ENST00000528288 WFDC8Q8IUA0 241 aa6.1□□□□□ -1.43
C11orf54-207ENST00000528288 ZADH2Q8N4Q0 377 aa6.1□□□□□ -1.43
C11orf54-207ENST00000528288 OR4S2Q8NH73 311 aa6.1□□□□□ -1.43
C11orf54-207ENST00000528288 OR9G1Q8NH87 305 aa6.1□□□□□ -1.43
C11orf54-207ENST00000528288 NPVFQ9HCQ7 196 aa6.1□□□□□ -1.43
C11orf54-207ENST00000528288 TP53TG5Q9Y2B4 290 aa6.1□□□□□ -1.43
C11orf54-207ENST00000528288 RAI1Q7Z5J4 1906 aaPredicted RBP6.1□□□□□ -1.43
C11orf54-207ENST00000528288 DYSFO75923 2080 aa6.1□□□□□ -1.43
C11orf54-207ENST00000528288 IGKV1OR2-108A0A075B7D4 117 aa6.1□□□□□ -1.43
C11orf54-207ENST00000528288 TRGV10A0A0A0MS01 117 aa6.1□□□□□ -1.43
C11orf54-207ENST00000528288 TRAV5A0A0B4J249 113 aa6.1□□□□□ -1.43
C11orf54-207ENST00000528288 KBTBD11-OT1A0A1B0GTJ5 212 aa6.1□□□□□ -1.43
C11orf54-207ENST00000528288 TSTD3H0UI37 97 aa6.1□□□□□ -1.43
C11orf54-207ENST00000528288 J3QR06 171 aa6.1□□□□□ -1.43
C11orf54-207ENST00000528288 CRYBB3P26998 211 aa6.1□□□□□ -1.43
C11orf54-207ENST00000528288 LGALS4P56470 323 aa6.1□□□□□ -1.43
C11orf54-207ENST00000528288 SSBP2P81877 361 aaPredicted RBP6.1□□□□□ -1.43
C11orf54-207ENST00000528288 ZNF90Q03938 601 aa6.1□□□□□ -1.43
C11orf54-207ENST00000528288 JOSD1Q15040 202 aaPredicted RBP6.1□□□□□ -1.43
C11orf54-207ENST00000528288 KIAA1644Q3SXP7 199 aa6.1□□□□□ -1.43
C11orf54-207ENST00000528288 DMRTC2Q8IXT2 367 aaPredicted RBP6.1□□□□□ -1.43
C11orf54-207ENST00000528288 DDB2Q92466 427 aa6.1□□□□□ -1.43
C11orf54-207ENST00000528288 ACY3Q96HD9 319 aa6.1□□□□□ -1.43
C11orf54-207ENST00000528288 KCNIP2Q9NS61 270 aa6.1□□□□□ -1.43
C11orf54-207ENST00000528288 MED13LQ71F56 2210 aa6.1□□□□□ -1.43
C11orf54-207ENST00000528288 ZNF891A8MT65 544 aaPredicted RBP6.1□□□□□ -1.43
C11orf54-207ENST00000528288 E7EUB6 86 aa6.1□□□□□ -1.43
C11orf54-207ENST00000528288 F2RL2O00254 374 aa6.1□□□□□ -1.43
C11orf54-207ENST00000528288 PDE6DO43924 150 aa6.1□□□□□ -1.43
C11orf54-207ENST00000528288 OR7C2O60412 319 aa6.1□□□□□ -1.43
C11orf54-207ENST00000528288 CXorf1O96002 111 aa6.1□□□□□ -1.43
C11orf54-207ENST00000528288 HSPE1P61604 102 aaKnown RBP6.1□□□□□ -1.43
C11orf54-207ENST00000528288 PKIAP61925 76 aa6.1□□□□□ -1.43
C11orf54-207ENST00000528288 RPP30P78346 268 aaKnown RBP6.1□□□□□ -1.43
C11orf54-207ENST00000528288 C19orf35Q6ZS72 473 aa6.1□□□□□ -1.43
C11orf54-207ENST00000528288 OR2T6Q8NHC8 308 aa6.1□□□□□ -1.43
C11orf54-207ENST00000528288 GAFA1Q96PS6 74 aa6.1□□□□□ -1.43
C11orf54-207ENST00000528288 RNF7Q9UBF6 113 aa6.1□□□□□ -1.43
C11orf54-207ENST00000528288 ZZEF1O43149 2961 aa6.1□□□□□ -1.43
C11orf54-207ENST00000528288 PLAUP00749 431 aa6.09□□□□□ -1.43
C11orf54-207ENST00000528288 CT45A6P0DMU7 189 aa6.09□□□□□ -1.43
C11orf54-207ENST00000528288 CT45A5P0DMU8 189 aa6.09□□□□□ -1.43
C11orf54-207ENST00000528288 CT45A7P0DMV0 189 aa6.09□□□□□ -1.43
C11orf54-207ENST00000528288 CHRNB4P30926 498 aa6.09□□□□□ -1.43
C11orf54-207ENST00000528288 OR10J1P30954 320 aa6.09□□□□□ -1.43
C11orf54-207ENST00000528288 SSX2Q16385 188 aa6.09□□□□□ -1.43
C11orf54-207ENST00000528288 MORN5Q5VZ52 161 aa6.09□□□□□ -1.43
C11orf54-207ENST00000528288 OR10G8Q8NGN5 311 aa6.09□□□□□ -1.43
C11orf54-207ENST00000528288 H1FXQ92522 213 aaKnown RBP6.09□□□□□ -1.43
C11orf54-207ENST00000528288 SGK494Q96LW2 274 aa6.09□□□□□ -1.43
C11orf54-207ENST00000528288 LINC00479Q96M42 142 aa6.09□□□□□ -1.43
C11orf54-207ENST00000528288 RNASE7Q9H1E1 156 aaKnown RBP6.09□□□□□ -1.43
C11orf54-207ENST00000528288 IGHV3-21A0A0B4J1V1 117 aa6.09□□□□□ -1.43
C11orf54-207ENST00000528288 IGHV3-72A0A0B4J1Y9 119 aa6.09□□□□□ -1.43
C11orf54-207ENST00000528288 LHBP01229 141 aa6.09□□□□□ -1.43
C11orf54-207ENST00000528288 REG1AP05451 166 aa6.09□□□□□ -1.43
C11orf54-207ENST00000528288 GLRXP35754 106 aa6.09□□□□□ -1.43
C11orf54-207ENST00000528288 SRP14P37108 136 aaKnown RBP6.09□□□□□ -1.43
C11orf54-207ENST00000528288 IER3P46695 156 aa6.09□□□□□ -1.43
C11orf54-207ENST00000528288 RPL15P61313 204 aaKnown RBP6.09□□□□□ -1.43
C11orf54-207ENST00000528288 PIP4P1Q86T03 277 aa6.09□□□□□ -1.43
C11orf54-207ENST00000528288 TCTEX1D1Q8N7M0 179 aa6.09□□□□□ -1.43
C11orf54-207ENST00000528288 MISP3Q96FF7 219 aa6.09□□□□□ -1.43
C11orf54-207ENST00000528288 DIRC2Q96SL1 478 aa6.09□□□□□ -1.43
C11orf54-207ENST00000528288 SLC35D1Q9NTN3 355 aa6.09□□□□□ -1.43
C11orf54-207ENST00000528288 ELOVL5Q9NYP7 299 aa6.09□□□□□ -1.43
C11orf54-207ENST00000528288 TM4SF5O14894 197 aa6.09□□□□□ -1.43
C11orf54-207ENST00000528288 TGOLN2O43493 480 aa6.09□□□□□ -1.43
C11orf54-207ENST00000528288 VENTXO95231 258 aa6.09□□□□□ -1.43
C11orf54-207ENST00000528288 CA1P00915 261 aaPredicted RBP6.09□□□□□ -1.43
C11orf54-207ENST00000528288 CGB3P0DN86 165 aa6.09□□□□□ -1.43
C11orf54-207ENST00000528288 CGB7P0DN87 165 aa6.09□□□□□ -1.43
C11orf54-207ENST00000528288 TEX38Q6PEX7 206 aa6.09□□□□□ -1.43
C11orf54-207ENST00000528288 TRAT1Q6PIZ9 186 aa6.09□□□□□ -1.43
C11orf54-207ENST00000528288 IGFL2Q6UWQ7 119 aa6.09□□□□□ -1.43
C11orf54-207ENST00000528288 ATG101Q9BSB4 218 aa6.09□□□□□ -1.43
C11orf54-207ENST00000528288 MRPL20Q9BYC9 149 aaKnown RBP6.09□□□□□ -1.43
C11orf54-207ENST00000528288 PLEKHA3Q9HB20 300 aa6.09□□□□□ -1.43
C11orf54-207ENST00000528288 LSM4Q9Y4Z0 139 aaKnown RBP6.09□□□□□ -1.43
C11orf54-207ENST00000528288 ERVFC1-1P60608 527 aa6.09□□□□□ -1.44
C11orf54-207ENST00000528288 TDRG1Q3Y452 100 aa6.09□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 80.7 ms