RNA–Protein interactions for RNA: ENST00000527020.5

USH1C-205, Transcript of USH1 protein network component harmonin, humanhuman

TSL 1 (best) BASIC

Gene USH1C, Length 2,159 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USH1C-205ENST00000527020 J3QR06 171 aa14.33□□□□□ -0.11
USH1C-205ENST00000527020 NDUFB4O95168 129 aa14.33□□□□□ -0.11
USH1C-205ENST00000527020 CXorf1O96002 111 aa14.33□□□□□ -0.11
USH1C-205ENST00000527020 RPL31P62899 125 aaKnown RBP14.33□□□□□ -0.11
USH1C-205ENST00000527020 MEF2CQ06413 473 aaPredicted RBP14.33□□□□□ -0.11
USH1C-205ENST00000527020 EFNB3Q15768 340 aa14.33□□□□□ -0.11
USH1C-205ENST00000527020 RTL8BQ17RB0 113 aa14.33□□□□□ -0.11
USH1C-205ENST00000527020 PRR30Q53SZ7 412 aaPredicted RBP14.33□□□□□ -0.11
USH1C-205ENST00000527020 LINC01551Q86U37 167 aa14.33□□□□□ -0.11
USH1C-205ENST00000527020 SEPSECSQ9HD40 501 aaKnown RBP14.33□□□□□ -0.11
USH1C-205ENST00000527020 TNFRSF13BO14836 293 aaPredicted RBP14.33□□□□□ -0.12
USH1C-205ENST00000527020 TMEM200BQ69YZ2 307 aa14.33□□□□□ -0.12
USH1C-205ENST00000527020 OR4X1Q8NH49 305 aa14.33□□□□□ -0.12
USH1C-205ENST00000527020 ANAPC16Q96DE5 110 aa14.33□□□□□ -0.12
USH1C-205ENST00000527020 MRPL20Q9BYC9 149 aaKnown RBP14.33□□□□□ -0.12
USH1C-205ENST00000527020 GAL3ST2Q9H3Q3 398 aa14.33□□□□□ -0.12
USH1C-205ENST00000527020 SAP30LQ9HAJ7 183 aa14.33□□□□□ -0.12
USH1C-205ENST00000527020 PKDREJQ9NTG1 2253 aa14.32□□□□□ -0.12
USH1C-205ENST00000527020 TEX50A0A1B0GTY4 177 aa14.32□□□□□ -0.12
USH1C-205ENST00000527020 FABP1P07148 127 aa14.32□□□□□ -0.12
USH1C-205ENST00000527020 SAA1P0DJI8 122 aaPredicted RBP14.32□□□□□ -0.12
USH1C-205ENST00000527020 IGFBP2P18065 325 aa14.32□□□□□ -0.12
USH1C-205ENST00000527020 RPL29P47914 159 aaKnown RBP14.32□□□□□ -0.12
USH1C-205ENST00000527020 PRR20EP86478 221 aa14.32□□□□□ -0.12
USH1C-205ENST00000527020 PRR20CP86479 221 aa14.32□□□□□ -0.12
USH1C-205ENST00000527020 PRR20DP86480 221 aa14.32□□□□□ -0.12
USH1C-205ENST00000527020 PRR20BP86481 221 aa14.32□□□□□ -0.12
USH1C-205ENST00000527020 PRR20AP86496 221 aa14.32□□□□□ -0.12
USH1C-205ENST00000527020 FAM122AQ96E09 287 aa14.32□□□□□ -0.12
USH1C-205ENST00000527020 GPR61Q9BZJ8 451 aa14.32□□□□□ -0.12
USH1C-205ENST00000527020 GAR1Q9NY12 217 aaKnown RBP14.32□□□□□ -0.12
USH1C-205ENST00000527020 TRBV20OR9-2A0A075B6H5 130 aa14.32□□□□□ -0.12
USH1C-205ENST00000527020 FNDC10F2Z333 226 aa14.32□□□□□ -0.12
USH1C-205ENST00000527020 F6UZH7 168 aa14.32□□□□□ -0.12
USH1C-205ENST00000527020 LINC00869P0C866 280 aa14.32□□□□□ -0.12
USH1C-205ENST00000527020 PYY3Q5JQD4 70 aa14.32□□□□□ -0.12
USH1C-205ENST00000527020 LYPD2Q6UXB3 125 aa14.32□□□□□ -0.12
USH1C-205ENST00000527020 MOB3BQ86TA1 216 aa14.32□□□□□ -0.12
USH1C-205ENST00000527020 ZNF114Q8NC26 417 aa14.32□□□□□ -0.12
USH1C-205ENST00000527020 ZNF714Q96N38 554 aa14.32□□□□□ -0.12
USH1C-205ENST00000527020 OR51M1Q9H341 326 aa14.32□□□□□ -0.12
USH1C-205ENST00000527020 PLEKHA3Q9HB20 300 aa14.32□□□□□ -0.12
USH1C-205ENST00000527020 AURKAIP1Q9NWT8 199 aaPredicted RBP14.32□□□□□ -0.12
USH1C-205ENST00000527020 BET1LQ9NYM9 111 aa14.32□□□□□ -0.12
USH1C-205ENST00000527020 ARFGEF3Q5TH69 2177 aa14.31□□□□□ -0.12
USH1C-205ENST00000527020 PPIAL4EA0A075B759 164 aa14.31□□□□□ -0.12
USH1C-205ENST00000527020 ELOA3CA0A087WX78 387 aaPredicted RBP14.31□□□□□ -0.12
USH1C-205ENST00000527020 PPIAL4DF5H284 164 aa14.31□□□□□ -0.12
USH1C-205ENST00000527020 PPP1R2P9O14990 202 aa14.31□□□□□ -0.12
USH1C-205ENST00000527020 PPIAL4FP0DN26 164 aa14.31□□□□□ -0.12
USH1C-205ENST00000527020 GCHFRP30047 84 aa14.31□□□□□ -0.12
USH1C-205ENST00000527020 TBR1Q16650 682 aa14.31□□□□□ -0.12
USH1C-205ENST00000527020 CLEC12BQ2HXU8 276 aa14.31□□□□□ -0.12
USH1C-205ENST00000527020 SPACA3Q8IXA5 215 aa14.31□□□□□ -0.12
USH1C-205ENST00000527020 OR5T1Q8NG75 326 aa14.31□□□□□ -0.12
USH1C-205ENST00000527020 WFIKKN1Q96NZ8 548 aa14.31□□□□□ -0.12
USH1C-205ENST00000527020 OR5B12Q96R08 314 aa14.31□□□□□ -0.12
USH1C-205ENST00000527020 PCGF1Q9BSM1 259 aa14.31□□□□□ -0.12
USH1C-205ENST00000527020 TMEM204Q9BSN7 226 aa14.31□□□□□ -0.12
USH1C-205ENST00000527020 MIOXQ9UGB7 285 aa14.31□□□□□ -0.12
USH1C-205ENST00000527020 PPIAL4AQ9Y536 164 aa14.31□□□□□ -0.12
USH1C-205ENST00000527020 YTHDF2Q9Y5A9 579 aaKnown RBP14.31□□□□□ -0.12
USH1C-205ENST00000527020 PGPEP1LA6NFU8 196 aa14.3□□□□□ -0.12
USH1C-205ENST00000527020 LINC00587B1AMM8 73 aa14.3□□□□□ -0.12
USH1C-205ENST00000527020 S100PP25815 95 aa14.3□□□□□ -0.12
USH1C-205ENST00000527020 IGKV1OR2-108A0A075B7D4 117 aa14.3□□□□□ -0.12
USH1C-205ENST00000527020 H0YJW9 148 aa14.3□□□□□ -0.12
USH1C-205ENST00000527020 GGCTO75223 188 aaKnown RBP14.3□□□□□ -0.12
USH1C-205ENST00000527020 FOXH1O75593 365 aa14.3□□□□□ -0.12
USH1C-205ENST00000527020 PDZD11Q5EBL8 140 aa14.3□□□□□ -0.12
USH1C-205ENST00000527020 CCL17Q92583 94 aa14.3□□□□□ -0.12
USH1C-205ENST00000527020 TXNDC17Q9BRA2 123 aa14.3□□□□□ -0.12
USH1C-205ENST00000527020 TMEM106BQ9NUM4 274 aa14.3□□□□□ -0.12
USH1C-205ENST00000527020 SCO2A0A1W2PP80 73 aa14.29□□□□□ -0.12
USH1C-205ENST00000527020 A0A1W2PPQ1 181 aa14.29□□□□□ -0.12
USH1C-205ENST00000527020 SHISA9B4DS77 424 aa14.29□□□□□ -0.12
USH1C-205ENST00000527020 S100A2P29034 98 aa14.29□□□□□ -0.12
USH1C-205ENST00000527020 CHRNA7P36544 502 aa14.29□□□□□ -0.12
USH1C-205ENST00000527020 RHOBP62745 196 aa14.29□□□□□ -0.12
USH1C-205ENST00000527020 DMRTC2Q8IXT2 367 aaPredicted RBP14.29□□□□□ -0.12
USH1C-205ENST00000527020 OR5AN1Q8NGI8 311 aa14.29□□□□□ -0.12
USH1C-205ENST00000527020 RNASE6Q93091 150 aaKnown RBP14.29□□□□□ -0.12
USH1C-205ENST00000527020 CTSZQ9UBR2 303 aa14.29□□□□□ -0.12
USH1C-205ENST00000527020 SLC45A2Q9UMX9 530 aa14.29□□□□□ -0.12
USH1C-205ENST00000527020 C1QTNF9P0C862 333 aa14.29□□□□□ -0.12
USH1C-205ENST00000527020 RNASE2P10153 161 aaKnown RBP14.29□□□□□ -0.12
USH1C-205ENST00000527020 C2orf83Q53S99 150 aa14.29□□□□□ -0.12
USH1C-205ENST00000527020 ASCL5Q7RTU5 278 aa14.29□□□□□ -0.12
USH1C-205ENST00000527020 OR10W1Q8NGF6 305 aa14.29□□□□□ -0.12
USH1C-205ENST00000527020 OR10D4PQ8NGN7 298 aa14.29□□□□□ -0.12
USH1C-205ENST00000527020 OSR1Q8TAX0 266 aaPredicted RBP14.29□□□□□ -0.12
USH1C-205ENST00000527020 POLEQ07864 2286 aa14.28□□□□□ -0.12
USH1C-205ENST00000527020 SRP14P37108 136 aaKnown RBP14.28□□□□□ -0.12
USH1C-205ENST00000527020 REG1BP48304 166 aa14.28□□□□□ -0.12
USH1C-205ENST00000527020 RAB31Q13636 194 aa14.28□□□□□ -0.12
USH1C-205ENST00000527020 DIAPH2-AS1Q14236 149 aa14.28□□□□□ -0.12
USH1C-205ENST00000527020 CDPF1Q6NVV7 123 aa14.28□□□□□ -0.12
USH1C-205ENST00000527020 TMEM144Q7Z5S9 345 aa14.28□□□□□ -0.12
USH1C-205ENST00000527020 OR2T10Q8NGZ9 312 aa14.28□□□□□ -0.12
USH1C-205ENST00000527020 OR5B3Q8NH48 314 aa14.28□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 74.3 ms