RNA–Protein interactions for RNA: ENST00000525121.2

HMGB1P40-201, Transcript of high mobility group box 1 pseudogene 40, humanhuman

BASIC

Gene HMGB1P40, Length 540 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P40-201ENST00000525121 LINC00482Q8N8I6 264 aa4.2□□□□□ -1.74
HMGB1P40-201ENST00000525121 OR1L6Q8NGR2 347 aa4.2□□□□□ -1.74
HMGB1P40-201ENST00000525121 RBPMSQ93062 196 aaKnown RBP4.2□□□□□ -1.74
HMGB1P40-201ENST00000525121 DUX3Q96PT4 197 aa4.2□□□□□ -1.74
HMGB1P40-201ENST00000525121 TP53RKQ96S44 253 aa4.2□□□□□ -1.74
HMGB1P40-201ENST00000525121 P2RX4Q99571 388 aa4.2□□□□□ -1.74
HMGB1P40-201ENST00000525121 CCDC32Q9BV29 185 aa4.2□□□□□ -1.74
HMGB1P40-201ENST00000525121 WDR12Q9GZL7 423 aaKnown RBP4.2□□□□□ -1.74
HMGB1P40-201ENST00000525121 TMEM222Q9H0R3 208 aa4.2□□□□□ -1.74
HMGB1P40-201ENST00000525121 C5orf66Q9H5L9 145 aa4.2□□□□□ -1.74
HMGB1P40-201ENST00000525121 GNB4Q9HAV0 340 aa4.2□□□□□ -1.74
HMGB1P40-201ENST00000525121 PLEKHA3Q9HB20 300 aa4.2□□□□□ -1.74
HMGB1P40-201ENST00000525121 RANGRFQ9HD47 186 aaPredicted RBP4.2□□□□□ -1.74
HMGB1P40-201ENST00000525121 FBXL7Q9UJT9 491 aa4.2□□□□□ -1.74
HMGB1P40-201ENST00000525121 GPR132Q9UNW8 380 aa4.2□□□□□ -1.74
HMGB1P40-201ENST00000525121 NSG2Q9Y328 171 aa4.2□□□□□ -1.74
HMGB1P40-201ENST00000525121 TRAV3A0A0B4J244 114 aa4.19□□□□□ -1.74
HMGB1P40-201ENST00000525121 TEX50A0A1B0GTY4 177 aa4.19□□□□□ -1.74
HMGB1P40-201ENST00000525121 IGLC7A0M8Q6 106 aa4.19□□□□□ -1.74
HMGB1P40-201ENST00000525121 ANKRD34BA5PLL1 514 aa4.19□□□□□ -1.74
HMGB1P40-201ENST00000525121 A6NHS1 94 aa4.19□□□□□ -1.74
HMGB1P40-201ENST00000525121 SEC14L6B5MCN3 397 aa4.19□□□□□ -1.74
HMGB1P40-201ENST00000525121 I3L521 148 aa4.19□□□□□ -1.74
HMGB1P40-201ENST00000525121 OVOL1O14753 267 aa4.19□□□□□ -1.74
HMGB1P40-201ENST00000525121 OR2J3O76001 311 aa4.19□□□□□ -1.74
HMGB1P40-201ENST00000525121 PRH1P02810 166 aa4.19□□□□□ -1.74
HMGB1P40-201ENST00000525121 REG1AP05451 166 aa4.19□□□□□ -1.74
HMGB1P40-201ENST00000525121 IL6RP08887 468 aaPredicted RBP4.19□□□□□ -1.74
HMGB1P40-201ENST00000525121 OR13C7P0DN81 318 aa4.19□□□□□ -1.74
HMGB1P40-201ENST00000525121 IL7P13232 177 aa4.19□□□□□ -1.74
HMGB1P40-201ENST00000525121 AREGP15514 252 aa4.19□□□□□ -1.74
HMGB1P40-201ENST00000525121 IGLL1P15814 213 aa4.19□□□□□ -1.74
HMGB1P40-201ENST00000525121 SNCAP37840 140 aa4.19□□□□□ -1.74
HMGB1P40-201ENST00000525121 HOXA1P49639 335 aaPredicted RBP4.19□□□□□ -1.74
HMGB1P40-201ENST00000525121 SUB1P53999 127 aaKnown RBP eCLIP4.19□□□□□ -1.74
HMGB1P40-201ENST00000525121 UBE2MP61081 183 aaKnown RBP4.19□□□□□ -1.74
HMGB1P40-201ENST00000525121 ERHP84090 104 aaKnown RBP4.19□□□□□ -1.74
HMGB1P40-201ENST00000525121 FHL3Q13643 280 aa4.19□□□□□ -1.74
HMGB1P40-201ENST00000525121 ZNF846Q147U1 533 aa4.19□□□□□ -1.74
HMGB1P40-201ENST00000525121 MRGPRG-AS1Q2M3A8 158 aa4.19□□□□□ -1.74
HMGB1P40-201ENST00000525121 RPEL1Q2QD12 228 aa4.19□□□□□ -1.74
HMGB1P40-201ENST00000525121 C15orf32Q32M92 178 aa4.19□□□□□ -1.74
HMGB1P40-201ENST00000525121 TMEM128Q5BJH2 165 aa4.19□□□□□ -1.74
HMGB1P40-201ENST00000525121 C9orf66Q5T8R8 295 aa4.19□□□□□ -1.74
HMGB1P40-201ENST00000525121 MZT2BQ6NZ67 158 aa4.19□□□□□ -1.74
HMGB1P40-201ENST00000525121 ETV3LQ6ZN32 361 aa4.19□□□□□ -1.74
HMGB1P40-201ENST00000525121 REC114Q7Z4M0 266 aa4.19□□□□□ -1.74
HMGB1P40-201ENST00000525121 C1QL4Q86Z23 238 aa4.19□□□□□ -1.74
HMGB1P40-201ENST00000525121 LGI3Q8N145 548 aa4.19□□□□□ -1.74
HMGB1P40-201ENST00000525121 WFDC9Q8NEX5 89 aa4.19□□□□□ -1.74
HMGB1P40-201ENST00000525121 IL22RA2Q969J5 263 aa4.19□□□□□ -1.74
HMGB1P40-201ENST00000525121 EEF1AKMT3Q96AZ1 226 aa4.19□□□□□ -1.74
HMGB1P40-201ENST00000525121 GALNT14Q96FL9 552 aa4.19□□□□□ -1.74
HMGB1P40-201ENST00000525121 SEC22AQ96IW7 307 aa4.19□□□□□ -1.74
HMGB1P40-201ENST00000525121 CXorf58Q96LI9 332 aa4.19□□□□□ -1.74
HMGB1P40-201ENST00000525121 RTBDNQ9BSG5 229 aaPredicted RBP4.19□□□□□ -1.74
HMGB1P40-201ENST00000525121 ELOVL1Q9BW60 279 aa4.19□□□□□ -1.74
HMGB1P40-201ENST00000525121 AKIP1Q9NQ31 210 aa4.19□□□□□ -1.74
HMGB1P40-201ENST00000525121 TMEM14BQ9NUH8 114 aa4.19□□□□□ -1.74
HMGB1P40-201ENST00000525121 PEF1Q9UBV8 284 aaKnown RBP4.19□□□□□ -1.74
HMGB1P40-201ENST00000525121 IGHV4OR15-8A0A075B7B6 117 aa4.18□□□□□ -1.74
HMGB1P40-201ENST00000525121 A0A087WW49 117 aa4.18□□□□□ -1.74
HMGB1P40-201ENST00000525121 TRBV7-1A0A0A6YYK4 115 aa4.18□□□□□ -1.74
HMGB1P40-201ENST00000525121 TRBV9A0A0B4J1U6 114 aa4.18□□□□□ -1.74
HMGB1P40-201ENST00000525121 DUXBA0A1W2PPF3 345 aa4.18□□□□□ -1.74
HMGB1P40-201ENST00000525121 G3V4G9 280 aa4.18□□□□□ -1.74
HMGB1P40-201ENST00000525121 SAP30O75446 220 aa4.18□□□□□ -1.74
HMGB1P40-201ENST00000525121 SCGB2A1O75556 95 aa4.18□□□□□ -1.74
HMGB1P40-201ENST00000525121 NDUFB6O95139 128 aa4.18□□□□□ -1.74
HMGB1P40-201ENST00000525121 CDS2O95674 445 aa4.18□□□□□ -1.74
HMGB1P40-201ENST00000525121 IGKV1-39P01597 117 aa4.18□□□□□ -1.74
HMGB1P40-201ENST00000525121 IGKV1-5P01602 117 aa4.18□□□□□ -1.74
HMGB1P40-201ENST00000525121 IGKV1D-39P04432 117 aa4.18□□□□□ -1.74
HMGB1P40-201ENST00000525121 CRYGCP07315 174 aa4.18□□□□□ -1.74
HMGB1P40-201ENST00000525121 SULT1A3P0DMM9 295 aa4.18□□□□□ -1.74
HMGB1P40-201ENST00000525121 SULT1A4P0DMN0 295 aa4.18□□□□□ -1.74
HMGB1P40-201ENST00000525121 MYOD1P15172 320 aa4.18□□□□□ -1.74
HMGB1P40-201ENST00000525121 CTRB1P17538 263 aa4.18□□□□□ -1.74
HMGB1P40-201ENST00000525121 HOXD3P31249 432 aaPredicted RBP4.18□□□□□ -1.74
HMGB1P40-201ENST00000525121 INSL3P51460 131 aa4.18□□□□□ -1.74
HMGB1P40-201ENST00000525121 CCR6P51684 374 aa4.18□□□□□ -1.74
HMGB1P40-201ENST00000525121 HSPE1P61604 102 aaKnown RBP4.18□□□□□ -1.74
HMGB1P40-201ENST00000525121 PRCDQ00LT1 54 aa4.18□□□□□ -1.74
HMGB1P40-201ENST00000525121 DEFA5Q01523 94 aa4.18□□□□□ -1.74
HMGB1P40-201ENST00000525121 DEFA6Q01524 100 aa4.18□□□□□ -1.74
HMGB1P40-201ENST00000525121 DCTN2Q13561 401 aaKnown RBP4.18□□□□□ -1.74
HMGB1P40-201ENST00000525121 KIAA0141Q14154 515 aaPredicted RBP4.18□□□□□ -1.74
HMGB1P40-201ENST00000525121 BAK1Q16611 211 aa4.18□□□□□ -1.74
HMGB1P40-201ENST00000525121 C4orf46Q504U0 113 aa4.18□□□□□ -1.74
HMGB1P40-201ENST00000525121 OXLD1Q5BKU9 147 aa4.18□□□□□ -1.74
HMGB1P40-201ENST00000525121 SAMD5Q5TGI4 173 aa4.18□□□□□ -1.74
HMGB1P40-201ENST00000525121 CTRB2Q6GPI1 263 aa4.18□□□□□ -1.74
HMGB1P40-201ENST00000525121 SLC25A24Q6NUK1 477 aa4.18□□□□□ -1.74
HMGB1P40-201ENST00000525121 ZNF343Q6P1L6 599 aa4.18□□□□□ -1.74
HMGB1P40-201ENST00000525121 ZNF429Q86V71 674 aa4.18□□□□□ -1.74
HMGB1P40-201ENST00000525121 SELENOHQ8IZQ5 122 aaKnown RBP4.18□□□□□ -1.74
HMGB1P40-201ENST00000525121 OR10W1Q8NGF6 305 aa4.18□□□□□ -1.74
HMGB1P40-201ENST00000525121 COQ8AQ8NI60 647 aa4.18□□□□□ -1.74
HMGB1P40-201ENST00000525121 GLYATL2Q8WU03 294 aa4.18□□□□□ -1.74
HMGB1P40-201ENST00000525121 OR4C12Q96R67 309 aa4.18□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 89.3 ms