RNA–Protein interactions for RNA: ENST00000523088.5

HDAC3-216, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 699 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-216ENST00000523088 RASL11AQ6T310 242 aa6.27□□□□□ -1.41
HDAC3-216ENST00000523088 UNQ6126/PRO20091Q6UXV3 157 aa6.27□□□□□ -1.41
HDAC3-216ENST00000523088 RPTNQ6XPR3 784 aa6.27□□□□□ -1.41
HDAC3-216ENST00000523088 ANKRD37Q7Z713 158 aa6.27□□□□□ -1.41
HDAC3-216ENST00000523088 HIST2H2ABQ8IUE6 130 aaPredicted RBP6.27□□□□□ -1.41
HDAC3-216ENST00000523088 C1orf158Q8N1D5 194 aa6.27□□□□□ -1.41
HDAC3-216ENST00000523088 ZNF709Q8N972 641 aa6.27□□□□□ -1.41
HDAC3-216ENST00000523088 OR4A5Q8NH83 315 aa6.27□□□□□ -1.41
HDAC3-216ENST00000523088 VSTM2AQ8TAG5 236 aa6.27□□□□□ -1.41
HDAC3-216ENST00000523088 PLPPR1Q8TBJ4 325 aa6.27□□□□□ -1.41
HDAC3-216ENST00000523088 TMEM54Q969K7 222 aa6.27□□□□□ -1.41
HDAC3-216ENST00000523088 TMEM125Q96AQ2 219 aa6.27□□□□□ -1.41
HDAC3-216ENST00000523088 STARD4Q96DR4 205 aa6.27□□□□□ -1.41
HDAC3-216ENST00000523088 PMCHL2Q9BQD1 86 aa6.27□□□□□ -1.41
HDAC3-216ENST00000523088 SSBP3Q9BWW4 388 aaPredicted RBP6.27□□□□□ -1.41
HDAC3-216ENST00000523088 PRDM14Q9GZV8 571 aa6.27□□□□□ -1.41
HDAC3-216ENST00000523088 WDR13Q9H1Z4 485 aa6.27□□□□□ -1.41
HDAC3-216ENST00000523088 C1orf123Q9NWV4 160 aa6.27□□□□□ -1.41
HDAC3-216ENST00000523088 KLK11Q9UBX7 282 aa6.27□□□□□ -1.41
HDAC3-216ENST00000523088 RABAC1Q9UI14 185 aa6.27□□□□□ -1.41
HDAC3-216ENST00000523088 AK3Q9UIJ7 227 aa6.27□□□□□ -1.41
HDAC3-216ENST00000523088 LSM2Q9Y333 95 aaKnown RBP6.27□□□□□ -1.41
HDAC3-216ENST00000523088 MED31Q9Y3C7 131 aa6.27□□□□□ -1.41
HDAC3-216ENST00000523088 UNC79Q9P2D8 2635 aa6.26□□□□□ -1.41
HDAC3-216ENST00000523088 TRAV14DV4A0A0A6YYC5 116 aa6.26□□□□□ -1.41
HDAC3-216ENST00000523088 TRAV8-6A0A0B4J262 113 aa6.26□□□□□ -1.41
HDAC3-216ENST00000523088 A0A1B0GV50 99 aa6.26□□□□□ -1.41
HDAC3-216ENST00000523088 TRDV1A0A1B0GX56 115 aa6.26□□□□□ -1.41
HDAC3-216ENST00000523088 LRRC30A6NM36 301 aa6.26□□□□□ -1.41
HDAC3-216ENST00000523088 C9JQL5 133 aa6.26□□□□□ -1.41
HDAC3-216ENST00000523088 PLPP1O14494 284 aa6.26□□□□□ -1.41
HDAC3-216ENST00000523088 GNGT2O14610 69 aa6.26□□□□□ -1.41
HDAC3-216ENST00000523088 NPFFO15130 113 aa6.26□□□□□ -1.41
HDAC3-216ENST00000523088 NDUFB6O95139 128 aa6.26□□□□□ -1.41
HDAC3-216ENST00000523088 TTRP02766 147 aa6.26□□□□□ -1.41
HDAC3-216ENST00000523088 IFITM1P13164 125 aa6.26□□□□□ -1.41
HDAC3-216ENST00000523088 RPL35AP18077 110 aaKnown RBP6.26□□□□□ -1.41
HDAC3-216ENST00000523088 LMO1P25800 156 aa6.26□□□□□ -1.41
HDAC3-216ENST00000523088 KIR2DS2P43631 304 aa6.26□□□□□ -1.41
HDAC3-216ENST00000523088 REG1BP48304 166 aa6.26□□□□□ -1.41
HDAC3-216ENST00000523088 DGCR2P98153 550 aa6.26□□□□□ -1.41
HDAC3-216ENST00000523088 ZNF92Q03936 586 aa6.26□□□□□ -1.41
HDAC3-216ENST00000523088 FOXI1Q12951 378 aa6.26□□□□□ -1.41
HDAC3-216ENST00000523088 RNPS1Q15287 305 aaKnown RBP6.26□□□□□ -1.41
HDAC3-216ENST00000523088 GUSBP1Q15486 140 aa6.26□□□□□ -1.41
HDAC3-216ENST00000523088 ZNF74Q16587 644 aa6.26□□□□□ -1.41
HDAC3-216ENST00000523088 CLEC12BQ2HXU8 276 aa6.26□□□□□ -1.41
HDAC3-216ENST00000523088 DEFB134Q4QY38 66 aa6.26□□□□□ -1.41
HDAC3-216ENST00000523088 PAGE3Q5JUK9 113 aa6.26□□□□□ -1.41
HDAC3-216ENST00000523088 BVES-AS1Q5T3Y7 98 aa6.26□□□□□ -1.41
HDAC3-216ENST00000523088 ZNF324BQ6AW86 544 aaPredicted RBP6.26□□□□□ -1.41
HDAC3-216ENST00000523088 TMEM207Q6UWW9 146 aa6.26□□□□□ -1.41
HDAC3-216ENST00000523088 GFRALQ6UXV0 394 aa6.26□□□□□ -1.41
HDAC3-216ENST00000523088 Q6ZUT4 128 aa6.26□□□□□ -1.41
HDAC3-216ENST00000523088 GOLT1AQ6ZVE7 132 aa6.26□□□□□ -1.41
HDAC3-216ENST00000523088 BCDIN3DQ7Z5W3 292 aaKnown RBP6.26□□□□□ -1.41
HDAC3-216ENST00000523088 ZNF695Q8IW36 515 aa6.26□□□□□ -1.41
HDAC3-216ENST00000523088 ZNF615Q8N8J6 731 aa6.26□□□□□ -1.41
HDAC3-216ENST00000523088 BOLLQ8N9W6 283 aaKnown RBP6.26□□□□□ -1.41
HDAC3-216ENST00000523088 OR10D3Q8NH80 312 aa6.26□□□□□ -1.41
HDAC3-216ENST00000523088 CLCF1Q9UBD9 225 aa6.26□□□□□ -1.41
HDAC3-216ENST00000523088 RCL1Q9Y2P8 373 aaKnown RBP6.26□□□□□ -1.41
HDAC3-216ENST00000523088 WASHC3Q9Y3C0 194 aa6.26□□□□□ -1.41
HDAC3-216ENST00000523088 NOTCH2Q04721 2471 aa6.26□□□□□ -1.41
HDAC3-216ENST00000523088 CACNA1CQ13936 2221 aa6.25□□□□□ -1.41
HDAC3-216ENST00000523088 PCNX1Q96RV3 2341 aa6.25□□□□□ -1.41
HDAC3-216ENST00000523088 A0A096LPE4 126 aa6.25□□□□□ -1.41
HDAC3-216ENST00000523088 TRGV10A0A0A0MS01 117 aa6.25□□□□□ -1.41
HDAC3-216ENST00000523088 A0A1W2PPZ6 126 aa6.25□□□□□ -1.41
HDAC3-216ENST00000523088 TCRBV9S1A1TA0A576 114 aa6.25□□□□□ -1.41
HDAC3-216ENST00000523088 DAPL1A0PJW8 107 aa6.25□□□□□ -1.41
HDAC3-216ENST00000523088 C5orf49A4QMS7 147 aa6.25□□□□□ -1.41
HDAC3-216ENST00000523088 CEACAM18A8MTB9 384 aa6.25□□□□□ -1.41
HDAC3-216ENST00000523088 VWC2LB2RUY7 222 aa6.25□□□□□ -1.41
HDAC3-216ENST00000523088 IFNL4K9M1U5 179 aa6.25□□□□□ -1.41
HDAC3-216ENST00000523088 HSPB6O14558 160 aa6.25□□□□□ -1.41
HDAC3-216ENST00000523088 ATP5LO75964 103 aa6.25□□□□□ -1.41
HDAC3-216ENST00000523088 SLC2A10O95528 541 aa6.25□□□□□ -1.41
HDAC3-216ENST00000523088 AMY2AP04746 511 aa6.25□□□□□ -1.41
HDAC3-216ENST00000523088 HSPB1P04792 205 aaKnown RBP6.25□□□□□ -1.41
HDAC3-216ENST00000523088 LINC00694P0DN24 101 aa6.25□□□□□ -1.41
HDAC3-216ENST00000523088 AMY2BP19961 511 aa6.25□□□□□ -1.41
HDAC3-216ENST00000523088 CDKN2AP42771 156 aaKnown RBP6.25□□□□□ -1.41
HDAC3-216ENST00000523088 SPHARQ15513 63 aa6.25□□□□□ -1.41
HDAC3-216ENST00000523088 TTC32Q5I0X7 151 aa6.25□□□□□ -1.41
HDAC3-216ENST00000523088 ZNF684Q5T5D7 378 aa6.25□□□□□ -1.41
HDAC3-216ENST00000523088 PAQR6Q6TCH4 344 aa6.25□□□□□ -1.41
HDAC3-216ENST00000523088 PRSS41Q7RTY9 318 aa6.25□□□□□ -1.41
HDAC3-216ENST00000523088 MOB3BQ86TA1 216 aa6.25□□□□□ -1.41
HDAC3-216ENST00000523088 WFDC3Q8IUB2 231 aa6.25□□□□□ -1.41
HDAC3-216ENST00000523088 ZNF808Q8N4W9 903 aaPredicted RBP6.25□□□□□ -1.41
HDAC3-216ENST00000523088 OR11H6Q8NGC7 330 aa6.25□□□□□ -1.41
HDAC3-216ENST00000523088 OR51G1Q8NGK1 321 aa6.25□□□□□ -1.41
HDAC3-216ENST00000523088 C8orf46Q8TAG6 207 aa6.25□□□□□ -1.41
HDAC3-216ENST00000523088 STAG3L4Q8TBR4 150 aa6.25□□□□□ -1.41
HDAC3-216ENST00000523088 MAL2Q969L2 176 aa6.25□□□□□ -1.41
HDAC3-216ENST00000523088 TIMD4Q96H15 378 aa6.25□□□□□ -1.41
HDAC3-216ENST00000523088 ATP5SQ99766 215 aa6.25□□□□□ -1.41
HDAC3-216ENST00000523088 PLAC1Q9HBJ0 212 aa6.25□□□□□ -1.41
HDAC3-216ENST00000523088 PNRC2Q9NPJ4 139 aaKnown RBP6.25□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 66.9 ms