RNA–Protein interactions for RNA: ENST00000521559.1

VPS13B-209, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

TSL 3

Gene VPS13B, Length 466 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-209ENST00000521559 FAM131AQ6UXB0 335 aa2.45□□□□□ -2.02
VPS13B-209ENST00000521559 BRD3OSQ6XYD6 125 aa2.45□□□□□ -2.02
VPS13B-209ENST00000521559 LINC00299Q6ZSB3 139 aa2.45□□□□□ -2.02
VPS13B-209ENST00000521559 SLC25A48Q6ZT89 311 aaKnown RBP2.45□□□□□ -2.02
VPS13B-209ENST00000521559 TMUB2Q71RG4 321 aa2.45□□□□□ -2.02
VPS13B-209ENST00000521559 H1FOOQ8IZA3 346 aaPredicted RBP2.45□□□□□ -2.02
VPS13B-209ENST00000521559 GVQW1Q8N7I0 195 aa2.45□□□□□ -2.02
VPS13B-209ENST00000521559 TMEM229BQ8NBD8 167 aa2.45□□□□□ -2.02
VPS13B-209ENST00000521559 ZNF439Q8NDP4 499 aa2.45□□□□□ -2.02
VPS13B-209ENST00000521559 BEST4Q8NFU0 473 aa2.45□□□□□ -2.02
VPS13B-209ENST00000521559 OR10J5Q8NHC4 309 aa2.45□□□□□ -2.02
VPS13B-209ENST00000521559 CT45A3Q8NHU0 189 aa2.45□□□□□ -2.02
VPS13B-209ENST00000521559 ZNF596Q8TC21 504 aa2.45□□□□□ -2.02
VPS13B-209ENST00000521559 IL1F10Q8WWZ1 152 aa2.45□□□□□ -2.02
VPS13B-209ENST00000521559 MAFIPQ8WZ33 124 aa2.45□□□□□ -2.02
VPS13B-209ENST00000521559 LEAP2Q969E1 77 aa2.45□□□□□ -2.02
VPS13B-209ENST00000521559 CREB3L1Q96BA8 519 aa2.45□□□□□ -2.02
VPS13B-209ENST00000521559 IFT46Q9NQC8 304 aa2.45□□□□□ -2.02
VPS13B-209ENST00000521559 OR1A1Q9P1Q5 309 aa2.45□□□□□ -2.02
VPS13B-209ENST00000521559 MTFP1Q9UDX5 166 aa2.45□□□□□ -2.02
VPS13B-209ENST00000521559 ZNF107Q9UII5 783 aaPredicted RBP2.45□□□□□ -2.02
VPS13B-209ENST00000521559 ANXA10Q9UJ72 324 aa2.45□□□□□ -2.02
VPS13B-209ENST00000521559 PSG11Q9UQ72 335 aa2.45□□□□□ -2.02
VPS13B-209ENST00000521559 RBMX2Q9Y388 322 aaKnown RBP2.45□□□□□ -2.02
VPS13B-209ENST00000521559 STRAPQ9Y3F4 350 aaKnown RBP2.45□□□□□ -2.02
VPS13B-209ENST00000521559 TBL2Q9Y4P3 447 aaKnown RBP2.45□□□□□ -2.02
VPS13B-209ENST00000521559 AMMECR1Q9Y4X0 333 aaPredicted RBP2.45□□□□□ -2.02
VPS13B-209ENST00000521559 SOX21Q9Y651 276 aaPredicted RBP2.45□□□□□ -2.02
VPS13B-209ENST00000521559 V9GYH0 126 aa2.45□□□□□ -2.02
VPS13B-209ENST00000521559 FLNBO75369 2602 aaKnown RBP2.45□□□□□ -2.02
VPS13B-209ENST00000521559 IGLV4-3A0A075B6K6 122 aa2.44□□□□□ -2.02
VPS13B-209ENST00000521559 A0A1W2PPE3 182 aa2.44□□□□□ -2.02
VPS13B-209ENST00000521559 MEIS3P1A6NDR6 274 aa2.44□□□□□ -2.02
VPS13B-209ENST00000521559 VGLL3A8MV65 326 aa2.44□□□□□ -2.02
VPS13B-209ENST00000521559 ZNF736B4DX44 427 aaPredicted RBP2.44□□□□□ -2.02
VPS13B-209ENST00000521559 CLDN34H7C241 214 aa2.44□□□□□ -2.02
VPS13B-209ENST00000521559 CCSO14618 274 aa2.44□□□□□ -2.02
VPS13B-209ENST00000521559 BET1O15155 118 aa2.44□□□□□ -2.02
VPS13B-209ENST00000521559 SLC31A2O15432 143 aa2.44□□□□□ -2.02
VPS13B-209ENST00000521559 LANCL1O43813 399 aa2.44□□□□□ -2.02
VPS13B-209ENST00000521559 ATP6V1G1O75348 118 aa2.44□□□□□ -2.02
VPS13B-209ENST00000521559 NXPH4O95158 308 aa2.44□□□□□ -2.02
VPS13B-209ENST00000521559 IGHV3-7P01780 117 aa2.44□□□□□ -2.02
VPS13B-209ENST00000521559 PMP2P02689 132 aa2.44□□□□□ -2.02
VPS13B-209ENST00000521559 CD74P04233 296 aa2.44□□□□□ -2.02
VPS13B-209ENST00000521559 GAPDHP04406 335 aaKnown RBP2.44□□□□□ -2.02
VPS13B-209ENST00000521559 FCER2P06734 321 aa2.44□□□□□ -2.02
VPS13B-209ENST00000521559 FBP1P09467 338 aa2.44□□□□□ -2.02
VPS13B-209ENST00000521559 OR8U9P0C7N5 309 aa2.44□□□□□ -2.02
VPS13B-209ENST00000521559 OR5H8P0DN80 308 aa2.44□□□□□ -2.02
VPS13B-209ENST00000521559 GP9P14770 177 aa2.44□□□□□ -2.02
VPS13B-209ENST00000521559 TBPP20226 339 aa2.44□□□□□ -2.02
VPS13B-209ENST00000521559 IL3RAP26951 378 aa2.44□□□□□ -2.02
VPS13B-209ENST00000521559 HLA-DMAP28067 261 aa2.44□□□□□ -2.02
VPS13B-209ENST00000521559 PPP1CCP36873 323 aaKnown RBP2.44□□□□□ -2.02
VPS13B-209ENST00000521559 GNG10P50151 68 aa2.44□□□□□ -2.02
VPS13B-209ENST00000521559 DYNLT3P51808 116 aa2.44□□□□□ -2.02
VPS13B-209ENST00000521559 ZNF137PP52743 207 aa2.44□□□□□ -2.02
VPS13B-209ENST00000521559 TAS2R46P59540 309 aa2.44□□□□□ -2.02
VPS13B-209ENST00000521559 ARPC4P59998 168 aa2.44□□□□□ -2.02
VPS13B-209ENST00000521559 ACTBP60709 375 aa2.44□□□□□ -2.02
VPS13B-209ENST00000521559 ACTG1P63261 375 aa2.44□□□□□ -2.02
VPS13B-209ENST00000521559 ZNF816Q0VGE8 651 aaPredicted RBP2.44□□□□□ -2.02
VPS13B-209ENST00000521559 BAMBIQ13145 260 aa2.44□□□□□ -2.02
VPS13B-209ENST00000521559 IL18Q14116 193 aa2.44□□□□□ -2.02
VPS13B-209ENST00000521559 CDK10Q15131 360 aa2.44□□□□□ -2.02
VPS13B-209ENST00000521559 ZNF79Q15937 498 aa2.44□□□□□ -2.02
VPS13B-209ENST00000521559 SSX2Q16385 188 aa2.44□□□□□ -2.02
VPS13B-209ENST00000521559 HLA-DRB5Q30154 266 aa2.44□□□□□ -2.02
VPS13B-209ENST00000521559 ACTBL2Q562R1 376 aa2.44□□□□□ -2.02
VPS13B-209ENST00000521559 PYDC2Q56P42 97 aa2.44□□□□□ -2.02
VPS13B-209ENST00000521559 SPANXN2Q5MJ10 180 aa2.44□□□□□ -2.02
VPS13B-209ENST00000521559 VAX1Q5SQQ9 334 aa2.44□□□□□ -2.02
VPS13B-209ENST00000521559 ZNF660Q6AZW8 331 aaPredicted RBP2.44□□□□□ -2.02
VPS13B-209ENST00000521559 ZNF833PQ6ZTB9 187 aa2.44□□□□□ -2.02
VPS13B-209ENST00000521559 LHFPL4Q7Z7J7 247 aa2.44□□□□□ -2.02
VPS13B-209ENST00000521559 STHQ8IWL8 128 aa2.44□□□□□ -2.02
VPS13B-209ENST00000521559 DYNAPQ8N1N2 210 aa2.44□□□□□ -2.02
VPS13B-209ENST00000521559 TMEM86BQ8N661 226 aa2.44□□□□□ -2.02
VPS13B-209ENST00000521559 SIGLECL1Q8N7X8 197 aa2.44□□□□□ -2.02
VPS13B-209ENST00000521559 GDPD1Q8N9F7 314 aa2.44□□□□□ -2.02
VPS13B-209ENST00000521559 OR4P4Q8NGL7 312 aa2.44□□□□□ -2.02
VPS13B-209ENST00000521559 OR5H2Q8NGV7 314 aa2.44□□□□□ -2.02
VPS13B-209ENST00000521559 OR10X1Q8NGY0 326 aa2.44□□□□□ -2.02
VPS13B-209ENST00000521559 OR6F1Q8NGZ6 308 aa2.44□□□□□ -2.02
VPS13B-209ENST00000521559 OR8U1Q8NH10 309 aa2.44□□□□□ -2.02
VPS13B-209ENST00000521559 ZNF418Q8TF45 676 aaPredicted RBP2.44□□□□□ -2.02
VPS13B-209ENST00000521559 SMIM4Q8WVI0 70 aa2.44□□□□□ -2.02
VPS13B-209ENST00000521559 C17orf50Q8WW18 174 aa2.44□□□□□ -2.02
VPS13B-209ENST00000521559 GIMAP1Q8WWP7 306 aa2.44□□□□□ -2.02
VPS13B-209ENST00000521559 S100ZQ8WXG8 99 aa2.44□□□□□ -2.02
VPS13B-209ENST00000521559 C22orf15Q8WYQ4 148 aa2.44□□□□□ -2.02
VPS13B-209ENST00000521559 RPEQ96AT9 228 aa2.44□□□□□ -2.02
VPS13B-209ENST00000521559 SLC6A7Q99884 636 aa2.44□□□□□ -2.02
VPS13B-209ENST00000521559 SSX3Q99909 188 aa2.44□□□□□ -2.02
VPS13B-209ENST00000521559 GINS4Q9BRT9 223 aa2.44□□□□□ -2.02
VPS13B-209ENST00000521559 AGMATQ9BSE5 352 aa2.44□□□□□ -2.02
VPS13B-209ENST00000521559 PARP12Q9H0J9 701 aaKnown RBP2.44□□□□□ -2.02
VPS13B-209ENST00000521559 IFI27L2Q9H2X8 130 aa2.44□□□□□ -2.02
VPS13B-209ENST00000521559 FAM212BQ9NTI7 297 aaPredicted RBP2.44□□□□□ -2.02
Retrieved 100 of 20,778 RNA–protein pairs in 61.4 ms