RNA–Protein interactions for RNA: ENST00000517713.5

COL13A1-210, Transcript of collagen type XIII alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL13A1, Length 2,007 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL13A1-210ENST00000517713 CYB5BO43169 146 aa21.46■■□□□ 1.03
COL13A1-210ENST00000517713 ENSAO43768 121 aaKnown RBP21.46■■□□□ 1.03
COL13A1-210ENST00000517713 OPRK1P41145 380 aa21.46■■□□□ 1.03
COL13A1-210ENST00000517713 ATP5IP56385 69 aaPredicted RBP21.46■■□□□ 1.03
COL13A1-210ENST00000517713 MALRD1Q5VYJ5 2156 aa21.46■■□□□ 1.03
COL13A1-210ENST00000517713 IGHV3-72A0A0B4J1Y9 119 aa21.46■■□□□ 1.03
COL13A1-210ENST00000517713 M0R036 132 aa21.46■■□□□ 1.03
COL13A1-210ENST00000517713 CEBPGP53567 150 aa21.46■■□□□ 1.03
COL13A1-210ENST00000517713 PMS2P11Q13670 270 aa21.46■■□□□ 1.03
COL13A1-210ENST00000517713 VMA21Q3ZAQ7 101 aa21.46■■□□□ 1.03
COL13A1-210ENST00000517713 AWAT1Q58HT5 328 aa21.46■■□□□ 1.03
COL13A1-210ENST00000517713 CYB561D1Q8N8Q1 229 aa21.46■■□□□ 1.03
COL13A1-210ENST00000517713 HMGB3O15347 200 aaKnown RBP21.45■■□□□ 1.02
COL13A1-210ENST00000517713 IFNA1P01562 189 aa21.45■■□□□ 1.02
COL13A1-210ENST00000517713 LGALS7P47929 136 aa21.45■■□□□ 1.02
COL13A1-210ENST00000517713 C2orf83Q53S99 150 aa21.45■■□□□ 1.02
COL13A1-210ENST00000517713 OR10W1Q8NGF6 305 aa21.45■■□□□ 1.02
COL13A1-210ENST00000517713 RAB24Q969Q5 203 aa21.45■■□□□ 1.02
COL13A1-210ENST00000517713 RITA1Q96K30 269 aa21.45■■□□□ 1.02
COL13A1-210ENST00000517713 SSBP3Q9BWW4 388 aaPredicted RBP21.45■■□□□ 1.02
COL13A1-210ENST00000517713 AMMECR1Q9Y4X0 333 aaPredicted RBP21.45■■□□□ 1.02
COL13A1-210ENST00000517713 LSM4Q9Y4Z0 139 aaKnown RBP21.45■■□□□ 1.02
COL13A1-210ENST00000517713 INSIG2Q9Y5U4 225 aa21.45■■□□□ 1.02
COL13A1-210ENST00000517713 PKD1L2Q7Z442 2459 aa21.45■■□□□ 1.02
COL13A1-210ENST00000517713 ATF4P18848 351 aaPredicted RBP21.45■■□□□ 1.02
COL13A1-210ENST00000517713 BSXQ3C1V8 233 aa21.45■■□□□ 1.02
COL13A1-210ENST00000517713 C1orf159Q96HA4 380 aa21.45■■□□□ 1.02
COL13A1-210ENST00000517713 GGTLC1Q9BX51 225 aa21.45■■□□□ 1.02
COL13A1-210ENST00000517713 RPS10P5Q9NQ39 176 aa21.45■■□□□ 1.02
COL13A1-210ENST00000517713 SNRNP70P08621 437 aaKnown RBP21.44■■□□□ 1.02
COL13A1-210ENST00000517713 PNKDQ8N490 385 aa21.44■■□□□ 1.02
COL13A1-210ENST00000517713 OR4P4Q8NGL7 312 aa21.44■■□□□ 1.02
COL13A1-210ENST00000517713 C20orf24Q9BUV8 137 aa21.44■■□□□ 1.02
COL13A1-210ENST00000517713 PUS1Q9Y606 427 aaKnown RBP eCLIP21.44■■□□□ 1.02
COL13A1-210ENST00000517713 LOC105371242A0A075B767 164 aa21.43■■□□□ 1.02
COL13A1-210ENST00000517713 IGHV1-3A0A0C4DH29 117 aa21.43■■□□□ 1.02
COL13A1-210ENST00000517713 FNDC10F2Z333 226 aa21.43■■□□□ 1.02
COL13A1-210ENST00000517713 SLC25A17O43808 307 aa21.43■■□□□ 1.02
COL13A1-210ENST00000517713 TEPPQ6URK8 271 aa21.43■■□□□ 1.02
COL13A1-210ENST00000517713 ZNF430Q9H8G1 570 aaPredicted RBP21.43■■□□□ 1.02
COL13A1-210ENST00000517713 VAX2Q9UIW0 290 aa21.43■■□□□ 1.02
COL13A1-210ENST00000517713 C7orf77A4D0Y5 90 aa21.43■■□□□ 1.02
COL13A1-210ENST00000517713 RNASE2P10153 161 aaKnown RBP21.43■■□□□ 1.02
COL13A1-210ENST00000517713 IGFBP2P18065 325 aa21.43■■□□□ 1.02
COL13A1-210ENST00000517713 GPR6P46095 362 aaPredicted RBP21.43■■□□□ 1.02
COL13A1-210ENST00000517713 CDC34P49427 236 aaPredicted RBP21.43■■□□□ 1.02
COL13A1-210ENST00000517713 ERHP84090 104 aaKnown RBP21.43■■□□□ 1.02
COL13A1-210ENST00000517713 RBMS3Q6XE24 437 aaKnown RBP21.43■■□□□ 1.02
COL13A1-210ENST00000517713 MOB3BQ86TA1 216 aa21.43■■□□□ 1.02
COL13A1-210ENST00000517713 PXMP4Q9Y6I8 212 aa21.43■■□□□ 1.02
COL13A1-210ENST00000517713 A0A1W2PN81 502 aa21.42■■□□□ 1.02
COL13A1-210ENST00000517713 A6NNC1 897 aa21.42■■□□□ 1.02
COL13A1-210ENST00000517713 E7EUB6 86 aa21.42■■□□□ 1.02
COL13A1-210ENST00000517713 INS-IGF2F8WCM5 200 aa21.42■■□□□ 1.02
COL13A1-210ENST00000517713 CHRNA7P36544 502 aa21.42■■□□□ 1.02
COL13A1-210ENST00000517713 ARF6P62330 175 aa21.42■■□□□ 1.02
COL13A1-210ENST00000517713 TPRP12270 2363 aaKnown RBP21.42■■□□□ 1.02
COL13A1-210ENST00000517713 SEC14L6B5MCN3 397 aa21.41■■□□□ 1.02
COL13A1-210ENST00000517713 NDUFS7O75251 213 aa21.41■■□□□ 1.02
COL13A1-210ENST00000517713 AKR1C3P42330 323 aa21.41■■□□□ 1.02
COL13A1-210ENST00000517713 GCSAMLQ5JQS6 135 aa21.41■■□□□ 1.02
COL13A1-210ENST00000517713 MIC13Q5XKP0 118 aa21.41■■□□□ 1.02
COL13A1-210ENST00000517713 RPEQ96AT9 228 aa21.41■■□□□ 1.02
COL13A1-210ENST00000517713 P2RX4Q99571 388 aa21.41■■□□□ 1.02
COL13A1-210ENST00000517713 TMPRSS5Q9H3S3 457 aa21.41■■□□□ 1.02
COL13A1-210ENST00000517713 SMCO4Q9NRQ5 59 aa21.41■■□□□ 1.02
COL13A1-210ENST00000517713 KCNIP2Q9NS61 270 aa21.41■■□□□ 1.02
COL13A1-210ENST00000517713 DCHS2Q6V1P9 2916 aa21.41■■□□□ 1.02
COL13A1-210ENST00000517713 YIF1AO95070 293 aa21.41■■□□□ 1.02
COL13A1-210ENST00000517713 DEFA4P12838 97 aa21.41■■□□□ 1.02
COL13A1-210ENST00000517713 FAM122AQ96E09 287 aa21.41■■□□□ 1.02
COL13A1-210ENST00000517713 LOC105371267A0A1B0GV96 52 aa21.4■■□□□ 1.02
COL13A1-210ENST00000517713 H3BQ15 152 aa21.4■■□□□ 1.02
COL13A1-210ENST00000517713 LY6LH3BQJ8 138 aa21.4■■□□□ 1.02
COL13A1-210ENST00000517713 RAB31Q13636 194 aa21.4■■□□□ 1.02
COL13A1-210ENST00000517713 TEX45Q8NA69 505 aa21.4■■□□□ 1.02
COL13A1-210ENST00000517713 TPSG1Q9NRR2 321 aa21.4■■□□□ 1.02
COL13A1-210ENST00000517713 CGB1A6NKQ9 187 aa21.39■■□□□ 1.02
COL13A1-210ENST00000517713 M0R1W7 72 aa21.39■■□□□ 1.02
COL13A1-210ENST00000517713 RHEBQ15382 184 aa21.39■■□□□ 1.02
COL13A1-210ENST00000517713 EFNA4P52798 201 aa21.39■■□□□ 1.01
COL13A1-210ENST00000517713 C10orf55Q5SWW7 151 aa21.39■■□□□ 1.01
COL13A1-210ENST00000517713 SSMEM1Q8WWF3 244 aa21.39■■□□□ 1.01
COL13A1-210ENST00000517713 TNCP24821 2201 aa21.38■■□□□ 1.01
COL13A1-210ENST00000517713 A0A1W2PPV4 95 aa21.38■■□□□ 1.01
COL13A1-210ENST00000517713 MRGPRG-AS1Q2M3A8 158 aa21.38■■□□□ 1.01
COL13A1-210ENST00000517713 SIRT7Q9NRC8 400 aa21.38■■□□□ 1.01
COL13A1-210ENST00000517713 OR11H6Q8NGC7 330 aa21.38■■□□□ 1.01
COL13A1-210ENST00000517713 PSMB3P49720 205 aa21.37■■□□□ 1.01
COL13A1-210ENST00000517713 B2MP61769 119 aa21.37■■□□□ 1.01
COL13A1-210ENST00000517713 WT1-ASQ06250 92 aa21.37■■□□□ 1.01
COL13A1-210ENST00000517713 FAM90A2PQ658T7 463 aa21.37■■□□□ 1.01
COL13A1-210ENST00000517713 TMEM144Q7Z5S9 345 aa21.37■■□□□ 1.01
COL13A1-210ENST00000517713 SLC35E3Q7Z769 313 aa21.37■■□□□ 1.01
COL13A1-210ENST00000517713 C17orf50Q8WW18 174 aa21.37■■□□□ 1.01
COL13A1-210ENST00000517713 NIPSNAP3BQ9BS92 247 aa21.37■■□□□ 1.01
COL13A1-210ENST00000517713 MANBALQ9NQG1 85 aa21.37■■□□□ 1.01
COL13A1-210ENST00000517713 CNTFRP26992 372 aa21.36■■□□□ 1.01
COL13A1-210ENST00000517713 TAGLN2P37802 199 aaKnown RBP21.36■■□□□ 1.01
COL13A1-210ENST00000517713 RPL29P47914 159 aaKnown RBP21.36■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 75.2 ms