RNA–Protein interactions for RNA: ENST00000517525.1

PVT1-204, Transcript of Pvt1 oncogene, humanhuman

TSL 3

Gene PVT1, Length 392 nt, Biotype lincRNA, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PVT1-204ENST00000517525 OR5B3Q8NH48 314 aa18.77■□□□□ 0.6
PVT1-204ENST00000517525 SEC22AQ96IW7 307 aa18.77■□□□□ 0.6
PVT1-204ENST00000517525 NXF2Q9GZY0 626 aaKnown RBP18.77■□□□□ 0.6
PVT1-204ENST00000517525 PEMTQ9UBM1 199 aa18.77■□□□□ 0.6
PVT1-204ENST00000517525 SMAD5-AS1Q9Y6J3 95 aa18.77■□□□□ 0.6
PVT1-204ENST00000517525 NOL3O60936 208 aaKnown RBP18.76■□□□□ 0.59
PVT1-204ENST00000517525 GGCTO75223 188 aaKnown RBP18.76■□□□□ 0.59
PVT1-204ENST00000517525 LY86O95711 162 aa18.76■□□□□ 0.59
PVT1-204ENST00000517525 STEAP1BQ6NZ63 245 aa18.76■□□□□ 0.59
PVT1-204ENST00000517525 GDPD1Q8N9F7 314 aa18.76■□□□□ 0.59
PVT1-204ENST00000517525 EEF1AKMT3Q96AZ1 226 aa18.76■□□□□ 0.59
PVT1-204ENST00000517525 DIRAS2Q96HU8 199 aa18.76■□□□□ 0.59
PVT1-204ENST00000517525 CXorf58Q96LI9 332 aa18.76■□□□□ 0.59
PVT1-204ENST00000517525 CCDC140Q96MF4 163 aa18.76■□□□□ 0.59
PVT1-204ENST00000517525 TMEM14BQ9NUH8 114 aa18.76■□□□□ 0.59
PVT1-204ENST00000517525 TRBV7-1A0A0A6YYK4 115 aa18.75■□□□□ 0.59
PVT1-204ENST00000517525 LGALS9O00182 355 aa18.75■□□□□ 0.59
PVT1-204ENST00000517525 RAB3DO95716 219 aa18.75■□□□□ 0.59
PVT1-204ENST00000517525 IGKV1-39P01597 117 aa18.75■□□□□ 0.59
PVT1-204ENST00000517525 IGKV1D-39P04432 117 aa18.75■□□□□ 0.59
PVT1-204ENST00000517525 REG1AP05451 166 aa18.75■□□□□ 0.59
PVT1-204ENST00000517525 SERPINE2P07093 398 aa18.75■□□□□ 0.59
PVT1-204ENST00000517525 WT1-ASQ06250 92 aa18.75■□□□□ 0.59
PVT1-204ENST00000517525 MEF2DQ14814 521 aa18.75■□□□□ 0.59
PVT1-204ENST00000517525 GPHB5Q86YW7 130 aa18.75■□□□□ 0.59
PVT1-204ENST00000517525 OR10W1Q8NGF6 305 aa18.75■□□□□ 0.59
PVT1-204ENST00000517525 OR4D10Q8NGI6 311 aa18.75■□□□□ 0.59
PVT1-204ENST00000517525 ZFAND1Q8TCF1 268 aa18.75■□□□□ 0.59
PVT1-204ENST00000517525 LSM10Q969L4 123 aaKnown RBP18.75■□□□□ 0.59
PVT1-204ENST00000517525 SOSTQ9BQB4 213 aa18.75■□□□□ 0.59
PVT1-204ENST00000517525 THYN1Q9P016 225 aa18.75■□□□□ 0.59
PVT1-204ENST00000517525 OR51B2Q9Y5P1 312 aa18.75■□□□□ 0.59
PVT1-204ENST00000517525 CEPT1Q9Y6K0 416 aa18.75■□□□□ 0.59
PVT1-204ENST00000517525 C15orf61A6NNL5 157 aa18.74■□□□□ 0.59
PVT1-204ENST00000517525 H0Y980 276 aa18.74■□□□□ 0.59
PVT1-204ENST00000517525 CYB5BO43169 146 aa18.74■□□□□ 0.59
PVT1-204ENST00000517525 OR2K2Q8NGT1 345 aa18.74■□□□□ 0.59
PVT1-204ENST00000517525 GSTZ1O43708 216 aaPredicted RBP18.73■□□□□ 0.59
PVT1-204ENST00000517525 OR13C7P0DN81 318 aa18.73■□□□□ 0.59
PVT1-204ENST00000517525 PGAM2P15259 253 aa18.73■□□□□ 0.59
PVT1-204ENST00000517525 PIGPP57054 158 aa18.73■□□□□ 0.59
PVT1-204ENST00000517525 VN1R17PQ8TDU5 208 aa18.73■□□□□ 0.59
PVT1-204ENST00000517525 ATP6V0BQ99437 205 aa18.73■□□□□ 0.59
PVT1-204ENST00000517525 RSL24D1Q9UHA3 163 aaKnown RBP18.73■□□□□ 0.59
PVT1-204ENST00000517525 B3GALNT1O75752 331 aa18.72■□□□□ 0.59
PVT1-204ENST00000517525 OR1L6Q8NGR2 347 aa18.72■□□□□ 0.59
PVT1-204ENST00000517525 ZNF502Q8TBZ5 544 aa18.72■□□□□ 0.59
PVT1-204ENST00000517525 TMEM56Q96MV1 263 aa18.72■□□□□ 0.59
PVT1-204ENST00000517525 NSG2Q9Y328 171 aa18.72■□□□□ 0.59
PVT1-204ENST00000517525 F11RQ9Y624 299 aaKnown RBP18.72■□□□□ 0.59
PVT1-204ENST00000517525 PPP5D1E7EU14 171 aa18.71■□□□□ 0.59
PVT1-204ENST00000517525 CTSDP07339 412 aaPredicted RBP18.71■□□□□ 0.59
PVT1-204ENST00000517525 IL18Q14116 193 aa18.71■□□□□ 0.59
PVT1-204ENST00000517525 SURF2Q15527 256 aaPredicted RBP18.71■□□□□ 0.59
PVT1-204ENST00000517525 CLEC19AQ6UXS0 136 aa18.71■□□□□ 0.59
PVT1-204ENST00000517525 H2BFWTQ7Z2G1 175 aa18.71■□□□□ 0.59
PVT1-204ENST00000517525 Q8N402 240 aa18.71■□□□□ 0.59
PVT1-204ENST00000517525 MRGPRFQ96AM1 343 aa18.71■□□□□ 0.59
PVT1-204ENST00000517525 C6orf62Q9GZU0 229 aaPredicted RBP18.71■□□□□ 0.59
PVT1-204ENST00000517525 MFSD2BA6NFX1 497 aa18.7■□□□□ 0.58
PVT1-204ENST00000517525 DBX1A6NMT0 343 aa18.7■□□□□ 0.58
PVT1-204ENST00000517525 OR2C1O95371 312 aa18.7■□□□□ 0.58
PVT1-204ENST00000517525 P0C879 139 aa18.7■□□□□ 0.58
PVT1-204ENST00000517525 TNFSF8P32971 234 aa18.7■□□□□ 0.58
PVT1-204ENST00000517525 ARL3P36405 182 aa18.7■□□□□ 0.58
PVT1-204ENST00000517525 ADAMTSL5Q6ZMM2 481 aa18.7■□□□□ 0.58
PVT1-204ENST00000517525 HAPLN4Q86UW8 402 aa18.7■□□□□ 0.58
PVT1-204ENST00000517525 Q8N1Y9 231 aa18.7■□□□□ 0.58
PVT1-204ENST00000517525 CCDC71LQ8N9Z2 235 aa18.7■□□□□ 0.58
PVT1-204ENST00000517525 OR13C8Q8NGS7 320 aa18.7■□□□□ 0.58
PVT1-204ENST00000517525 THAP7Q9BT49 309 aaPredicted RBP18.7■□□□□ 0.58
PVT1-204ENST00000517525 COL7A1Q02388 2944 aa18.7■□□□□ 0.58
PVT1-204ENST00000517525 A8MZ25 164 aa18.69■□□□□ 0.58
PVT1-204ENST00000517525 CLEC3BP05452 202 aa18.69■□□□□ 0.58
PVT1-204ENST00000517525 AKAIN1P0CW23 69 aa18.69■□□□□ 0.58
PVT1-204ENST00000517525 PI3P19957 117 aa18.69■□□□□ 0.58
PVT1-204ENST00000517525 C11orf87Q6NUJ2 197 aa18.69■□□□□ 0.58
PVT1-204ENST00000517525 MCFD2Q8NI22 146 aa18.69■□□□□ 0.58
PVT1-204ENST00000517525 TP53RKQ96S44 253 aa18.69■□□□□ 0.58
PVT1-204ENST00000517525 COPZ2Q9P299 210 aa18.69■□□□□ 0.58
PVT1-204ENST00000517525 C3orf85A0A1B0GTC6 90 aa18.68■□□□□ 0.58
PVT1-204ENST00000517525 A8MWP6 167 aa18.68■□□□□ 0.58
PVT1-204ENST00000517525 DISC1C4P0D8 188 aa18.68■□□□□ 0.58
PVT1-204ENST00000517525 ATG12O94817 140 aa18.68■□□□□ 0.58
PVT1-204ENST00000517525 UCP1P25874 307 aa18.68■□□□□ 0.58
PVT1-204ENST00000517525 PPP5CP53041 499 aa18.68■□□□□ 0.58
PVT1-204ENST00000517525 HSPE1P61604 102 aaKnown RBP18.68■□□□□ 0.58
PVT1-204ENST00000517525 SCGB2B2Q4G0G5 96 aa18.68■□□□□ 0.58
PVT1-204ENST00000517525 FAM106AQ4KMX7 169 aa18.68■□□□□ 0.58
PVT1-204ENST00000517525 LCN12Q6JVE5 192 aa18.68■□□□□ 0.58
PVT1-204ENST00000517525 OR4A16Q8NH70 328 aa18.68■□□□□ 0.58
PVT1-204ENST00000517525 SLC2A8Q9NY64 477 aa18.68■□□□□ 0.58
PVT1-204ENST00000517525 ANKRD20A5PA0PJZ0 165 aa18.67■□□□□ 0.58
PVT1-204ENST00000517525 C2orf70A6NJV1 201 aa18.67■□□□□ 0.58
PVT1-204ENST00000517525 IGKV1-5P01602 117 aa18.67■□□□□ 0.58
PVT1-204ENST00000517525 IGHV3-23P01764 117 aa18.67■□□□□ 0.58
PVT1-204ENST00000517525 HLA-AP01891 365 aaKnown RBP18.67■□□□□ 0.58
PVT1-204ENST00000517525 MFAP2P55001 183 aa18.67■□□□□ 0.58
PVT1-204ENST00000517525 PRCDQ00LT1 54 aa18.67■□□□□ 0.58
PVT1-204ENST00000517525 OR2C3Q8N628 320 aa18.67■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 44.3 ms