RNA–Protein interactions for RNA: ENST00000509258.5

RNF4-212, Transcript of ring finger protein 4, humanhuman

TSL 1 (best) BASIC

Gene RNF4, Length 893 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-212ENST00000509258 HPRT1P00492 218 aa8.19□□□□□ -1.1
RNF4-212ENST00000509258 RBMY1DP0C7P1 496 aaKnown RBP8.19□□□□□ -1.1
RNF4-212ENST00000509258 DEFA4P12838 97 aa8.19□□□□□ -1.1
RNF4-212ENST00000509258 NQO2P16083 231 aa8.19□□□□□ -1.1
RNF4-212ENST00000509258 ARL3P36405 182 aa8.19□□□□□ -1.1
RNF4-212ENST00000509258 LPAR6P43657 344 aa8.19□□□□□ -1.1
RNF4-212ENST00000509258 HERV-K104P61576 105 aa8.19□□□□□ -1.1
RNF4-212ENST00000509258 OR4A5Q8NH83 315 aa8.19□□□□□ -1.1
RNF4-212ENST00000509258 FAM110AQ9BQ89 295 aa8.19□□□□□ -1.1
RNF4-212ENST00000509258 SRD5A3Q9H8P0 318 aa8.19□□□□□ -1.1
RNF4-212ENST00000509258 PLEKHA2Q9HB19 425 aa8.19□□□□□ -1.1
RNF4-212ENST00000509258 THYN1Q9P016 225 aa8.19□□□□□ -1.1
RNF4-212ENST00000509258 COMMD3Q9UBI1 195 aa8.19□□□□□ -1.1
RNF4-212ENST00000509258 MLXQ9UH92 298 aa8.19□□□□□ -1.1
RNF4-212ENST00000509258 IGHV3-21A0A0B4J1V1 117 aa8.18□□□□□ -1.1
RNF4-212ENST00000509258 F8W735 103 aaPredicted RBP8.18□□□□□ -1.1
RNF4-212ENST00000509258 TMEM127O75204 238 aa8.18□□□□□ -1.1
RNF4-212ENST00000509258 IGKV1-39P01597 117 aa8.18□□□□□ -1.1
RNF4-212ENST00000509258 IGKV1D-39P04432 117 aa8.18□□□□□ -1.1
RNF4-212ENST00000509258 PRSS3P35030 304 aa8.18□□□□□ -1.1
RNF4-212ENST00000509258 G6PCP35575 357 aa8.18□□□□□ -1.1
RNF4-212ENST00000509258 CATR1Q13166 79 aa8.18□□□□□ -1.1
RNF4-212ENST00000509258 CTF1Q16619 201 aa8.18□□□□□ -1.1
RNF4-212ENST00000509258 PHLDA2Q53GA4 152 aa8.18□□□□□ -1.1
RNF4-212ENST00000509258 TM4SF20Q53R12 229 aa8.18□□□□□ -1.1
RNF4-212ENST00000509258 RNASE12Q5GAN4 147 aaKnown RBP8.18□□□□□ -1.1
RNF4-212ENST00000509258 ZNF57Q68EA5 555 aaPredicted RBP8.18□□□□□ -1.1
RNF4-212ENST00000509258 GPHB5Q86YW7 130 aa8.18□□□□□ -1.1
RNF4-212ENST00000509258 SNX29P2Q8IUI4 249 aa8.18□□□□□ -1.1
RNF4-212ENST00000509258 CROCCP3Q8IVE0 287 aa8.18□□□□□ -1.1
RNF4-212ENST00000509258 TMEM61Q8N0U2 210 aa8.18□□□□□ -1.1
RNF4-212ENST00000509258 DEFB125Q8N687 156 aa8.18□□□□□ -1.1
RNF4-212ENST00000509258 OR5H2Q8NGV7 314 aa8.18□□□□□ -1.1
RNF4-212ENST00000509258 ZNF502Q8TBZ5 544 aa8.18□□□□□ -1.1
RNF4-212ENST00000509258 CXorf58Q96LI9 332 aa8.18□□□□□ -1.1
RNF4-212ENST00000509258 PLECQ15149 4684 aaKnown RBP8.17□□□□□ -1.1
RNF4-212ENST00000509258 TRBV7-1A0A0A6YYK4 115 aa8.17□□□□□ -1.1
RNF4-212ENST00000509258 MARCH11A6NNE9 402 aa8.17□□□□□ -1.1
RNF4-212ENST00000509258 M0QYG6 137 aa8.17□□□□□ -1.1
RNF4-212ENST00000509258 CBLN1P23435 193 aa8.17□□□□□ -1.1
RNF4-212ENST00000509258 F2RP25116 425 aa8.17□□□□□ -1.1
RNF4-212ENST00000509258 GPR183P32249 361 aa8.17□□□□□ -1.1
RNF4-212ENST00000509258 DMBX1Q8NFW5 382 aa8.17□□□□□ -1.1
RNF4-212ENST00000509258 OR52B4Q8NGK2 314 aa8.17□□□□□ -1.1
RNF4-212ENST00000509258 BORCS5Q969J3 196 aa8.17□□□□□ -1.1
RNF4-212ENST00000509258 MARC2Q969Z3 335 aa8.17□□□□□ -1.1
RNF4-212ENST00000509258 DGCR14Q96DF8 476 aaKnown RBP8.17□□□□□ -1.1
RNF4-212ENST00000509258 QTRT1Q9BXR0 403 aaKnown RBP8.17□□□□□ -1.1
RNF4-212ENST00000509258 COMMD9Q9P000 198 aa8.17□□□□□ -1.1
RNF4-212ENST00000509258 ALMS1Q8TCU4 4167 aa8.17□□□□□ -1.1
RNF4-212ENST00000509258 TRAV25A0A0B4J276 109 aa8.16□□□□□ -1.1
RNF4-212ENST00000509258 ZNF320A2RRD8 509 aa8.16□□□□□ -1.1
RNF4-212ENST00000509258 A8MWP6 167 aa8.16□□□□□ -1.1
RNF4-212ENST00000509258 KRASP01116 189 aa8.16□□□□□ -1.1
RNF4-212ENST00000509258 APOA1P02647 267 aa8.16□□□□□ -1.1
RNF4-212ENST00000509258 CLEC3BP05452 202 aa8.16□□□□□ -1.1
RNF4-212ENST00000509258 OR13C7P0DN81 318 aa8.16□□□□□ -1.1
RNF4-212ENST00000509258 TAS2R46P59540 309 aa8.16□□□□□ -1.1
RNF4-212ENST00000509258 IZUMO4Q1ZYL8 232 aa8.16□□□□□ -1.1
RNF4-212ENST00000509258 THOC7Q6I9Y2 204 aaKnown RBP8.16□□□□□ -1.1
RNF4-212ENST00000509258 RBPMS2Q6ZRY4 209 aaKnown RBP8.16□□□□□ -1.1
RNF4-212ENST00000509258 UXS1Q8NBZ7 420 aa8.16□□□□□ -1.1
RNF4-212ENST00000509258 SRSF8Q9BRL6 282 aaKnown RBP8.16□□□□□ -1.1
RNF4-212ENST00000509258 CHRDL1Q9BU40 450 aa8.16□□□□□ -1.1
RNF4-212ENST00000509258 GGTLC1Q9BX51 225 aa8.16□□□□□ -1.1
RNF4-212ENST00000509258 COMMD5Q9GZQ3 224 aa8.16□□□□□ -1.1
RNF4-212ENST00000509258 NDUFA4L2Q9NRX3 87 aa8.16□□□□□ -1.1
RNF4-212ENST00000509258 IGHV3OR16-8A0A075B7F1 116 aa8.15□□□□□ -1.1
RNF4-212ENST00000509258 LOC102724200A0A096LPH7 203 aaPredicted RBP8.15□□□□□ -1.1
RNF4-212ENST00000509258 K7EIM0 57 aa8.15□□□□□ -1.1
RNF4-212ENST00000509258 GPR31O00270 319 aa8.15□□□□□ -1.1
RNF4-212ENST00000509258 SCAF4O95104 1147 aaKnown RBP8.15□□□□□ -1.1
RNF4-212ENST00000509258 GABARAPO95166 117 aa8.15□□□□□ -1.1
RNF4-212ENST00000509258 SERPINE2P07093 398 aa8.15□□□□□ -1.1
RNF4-212ENST00000509258 TRAPPC2P0DI81 140 aa8.15□□□□□ -1.1
RNF4-212ENST00000509258 TRAPPC2BP0DI82 140 aa8.15□□□□□ -1.1
RNF4-212ENST00000509258 PI3P19957 117 aa8.15□□□□□ -1.1
RNF4-212ENST00000509258 ADMP35318 185 aa8.15□□□□□ -1.1
RNF4-212ENST00000509258 BTNL8Q6UX41 500 aa8.15□□□□□ -1.1
RNF4-212ENST00000509258 TBC1D26Q86UD7 250 aa8.15□□□□□ -1.1
RNF4-212ENST00000509258 SLC38A6Q8IZM9 456 aa8.15□□□□□ -1.1
RNF4-212ENST00000509258 GDPD1Q8N9F7 314 aa8.15□□□□□ -1.1
RNF4-212ENST00000509258 OR4D10Q8NGI6 311 aa8.15□□□□□ -1.1
RNF4-212ENST00000509258 OR6F1Q8NGZ6 308 aa8.15□□□□□ -1.1
RNF4-212ENST00000509258 CD300LFQ8TDQ1 290 aa8.15□□□□□ -1.1
RNF4-212ENST00000509258 SEC22AQ96IW7 307 aa8.15□□□□□ -1.1
RNF4-212ENST00000509258 HINT2Q9BX68 163 aa8.15□□□□□ -1.1
RNF4-212ENST00000509258 ZNF436Q9C0F3 470 aaPredicted RBP8.15□□□□□ -1.1
RNF4-212ENST00000509258 MIXL1Q9H2W2 232 aa8.15□□□□□ -1.1
RNF4-212ENST00000509258 VCX3AQ9NNX9 186 aa8.15□□□□□ -1.1
RNF4-212ENST00000509258 UFC1Q9Y3C8 167 aa8.15□□□□□ -1.1
RNF4-212ENST00000509258 OR51B2Q9Y5P1 312 aa8.15□□□□□ -1.1
RNF4-212ENST00000509258 AGRNO00468 2067 aa8.15□□□□□ -1.11
RNF4-212ENST00000509258 OR2T8A6NH00 312 aa8.14□□□□□ -1.11
RNF4-212ENST00000509258 TGOLN2O43493 480 aa8.14□□□□□ -1.11
RNF4-212ENST00000509258 C8orf88P0DMB2 117 aa8.14□□□□□ -1.11
RNF4-212ENST00000509258 PTBP1P26599 531 aaKnown RBP eCLIP8.14□□□□□ -1.11
RNF4-212ENST00000509258 ELLP55199 621 aaPredicted RBP8.14□□□□□ -1.11
RNF4-212ENST00000509258 SLC25A24Q6NUK1 477 aa8.14□□□□□ -1.11
RNF4-212ENST00000509258 PLET1Q6UQ28 207 aa8.14□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 89.4 ms