RNA–Protein interactions for RNA: ENST00000507459.5

CCHCR1-222, Transcript of coiled-coil alpha-helical rod protein 1, human

TSL 5

Gene CCHCR1, Length 582 nt, Biotype nonsense mediated decay.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CCHCR1-222	ENST00000507459	OR13C7	P0DN81	318 aa		10.82	□□□□□ -0.68
CCHCR1-222	ENST00000507459	HIST1H1B	P16401	226 aa	Known RBP	10.82	□□□□□ -0.68
CCHCR1-222	ENST00000507459	MEF2D	Q14814	521 aa		10.82	□□□□□ -0.68
CCHCR1-222	ENST00000507459	H2BFWT	Q7Z2G1	175 aa		10.82	□□□□□ -0.68
CCHCR1-222	ENST00000507459	OR13C8	Q8NGS7	320 aa		10.82	□□□□□ -0.68
CCHCR1-222	ENST00000507459	ZFAND1	Q8TCF1	268 aa		10.82	□□□□□ -0.68
CCHCR1-222	ENST00000507459	MARCH1	Q8TCQ1	289 aa		10.82	□□□□□ -0.68
CCHCR1-222	ENST00000507459	MRGPRF	Q96AM1	343 aa		10.82	□□□□□ -0.68
CCHCR1-222	ENST00000507459	ZNF486	Q96H40	463 aa	Predicted RBP	10.82	□□□□□ -0.68
CCHCR1-222	ENST00000507459	FAM212B	Q9NTI7	297 aa	Predicted RBP	10.82	□□□□□ -0.68
CCHCR1-222	ENST00000507459	COPZ2	Q9P299	210 aa		10.82	□□□□□ -0.68
CCHCR1-222	ENST00000507459	IGLV11-55	A0A075B6I3	123 aa		10.81	□□□□□ -0.68
CCHCR1-222	ENST00000507459	DBX1	A6NMT0	343 aa		10.81	□□□□□ -0.68
CCHCR1-222	ENST00000507459	DISC1	C4P0D8	188 aa		10.81	□□□□□ -0.68
CCHCR1-222	ENST00000507459	HLA-A	P01891	365 aa	Known RBP	10.81	□□□□□ -0.68
CCHCR1-222	ENST00000507459	FGF2	P09038	288 aa		10.81	□□□□□ -0.68
CCHCR1-222	ENST00000507459	AKAIN1	P0CW23	69 aa		10.81	□□□□□ -0.68
CCHCR1-222	ENST00000507459	MECP2	P51608	486 aa	Known RBP	10.81	□□□□□ -0.68
CCHCR1-222	ENST00000507459	RND3	P61587	244 aa		10.81	□□□□□ -0.68
CCHCR1-222	ENST00000507459	CD69	Q07108	199 aa		10.81	□□□□□ -0.68
CCHCR1-222	ENST00000507459	DCTN2	Q13561	401 aa	Known RBP	10.81	□□□□□ -0.68
CCHCR1-222	ENST00000507459	CLEC19A	Q6UXS0	136 aa		10.81	□□□□□ -0.68
CCHCR1-222	ENST00000507459	OR4C16	Q8NGL9	310 aa		10.81	□□□□□ -0.68
CCHCR1-222	ENST00000507459	OR4A16	Q8NH70	328 aa		10.81	□□□□□ -0.68
CCHCR1-222	ENST00000507459	EEF1AKMT3	Q96AZ1	226 aa		10.81	□□□□□ -0.68
CCHCR1-222	ENST00000507459	SEC22A	Q96IW7	307 aa		10.81	□□□□□ -0.68
CCHCR1-222	ENST00000507459	TSC22D3	Q99576	134 aa		10.81	□□□□□ -0.68
CCHCR1-222	ENST00000507459	SRSF8	Q9BRL6	282 aa	Known RBP	10.81	□□□□□ -0.68
CCHCR1-222	ENST00000507459	NXF2	Q9GZY0	626 aa	Known RBP	10.81	□□□□□ -0.68
CCHCR1-222	ENST00000507459	NDUFA4L2	Q9NRX3	87 aa		10.81	□□□□□ -0.68
CCHCR1-222	ENST00000507459	RSL24D1	Q9UHA3	163 aa	Known RBP	10.81	□□□□□ -0.68
CCHCR1-222	ENST00000507459	PRND	Q9UKY0	176 aa		10.81	□□□□□ -0.68
CCHCR1-222	ENST00000507459	C3orf85	A0A1B0GTC6	90 aa		10.8	□□□□□ -0.68
CCHCR1-222	ENST00000507459	PTBP1	P26599	531 aa	Known RBP eCLIP	10.8	□□□□□ -0.68
CCHCR1-222	ENST00000507459	WT1-AS	Q06250	92 aa		10.8	□□□□□ -0.68
CCHCR1-222	ENST00000507459	SP6	Q3SY56	376 aa		10.8	□□□□□ -0.68
CCHCR1-222	ENST00000507459	THOC7	Q6I9Y2	204 aa	Known RBP	10.8	□□□□□ -0.68
CCHCR1-222	ENST00000507459	SLC25A24	Q6NUK1	477 aa		10.8	□□□□□ -0.68
CCHCR1-222	ENST00000507459	CCDC71L	Q8N9Z2	235 aa		10.8	□□□□□ -0.68
CCHCR1-222	ENST00000507459	TP53RK	Q96S44	253 aa		10.8	□□□□□ -0.68
CCHCR1-222	ENST00000507459	FKBP11	Q9NYL4	201 aa		10.8	□□□□□ -0.68
CCHCR1-222	ENST00000507459	LSM4	Q9Y4Z0	139 aa	Known RBP	10.8	□□□□□ -0.68
CCHCR1-222	ENST00000507459	ANKRD20A5P	A0PJZ0	165 aa		10.79	□□□□□ -0.68
CCHCR1-222	ENST00000507459	MFSD2B	A6NFX1	497 aa		10.79	□□□□□ -0.68
CCHCR1-222	ENST00000507459	C15orf61	A6NNL5	157 aa		10.79	□□□□□ -0.68
CCHCR1-222	ENST00000507459		H0Y980	276 aa		10.79	□□□□□ -0.68
CCHCR1-222	ENST00000507459	GSTZ1	O43708	216 aa	Predicted RBP	10.79	□□□□□ -0.68
CCHCR1-222	ENST00000507459	GGCT	O75223	188 aa	Known RBP	10.79	□□□□□ -0.68
CCHCR1-222	ENST00000507459	OR2C1	O95371	312 aa		10.79	□□□□□ -0.68
CCHCR1-222	ENST00000507459	CTSD	P07339	412 aa	Predicted RBP	10.79	□□□□□ -0.68
CCHCR1-222	ENST00000507459	GP9	P14770	177 aa		10.79	□□□□□ -0.68
CCHCR1-222	ENST00000507459	ARL3	P36405	182 aa		10.79	□□□□□ -0.68
CCHCR1-222	ENST00000507459	IZUMO4	Q1ZYL8	232 aa		10.79	□□□□□ -0.68
CCHCR1-222	ENST00000507459	TRIM16L	Q309B1	348 aa		10.79	□□□□□ -0.68
CCHCR1-222	ENST00000507459	FAM209B	Q5JX69	171 aa		10.79	□□□□□ -0.68
CCHCR1-222	ENST00000507459	IL34	Q6ZMJ4	242 aa		10.79	□□□□□ -0.68
CCHCR1-222	ENST00000507459	HSD17B13	Q7Z5P4	300 aa	Predicted RBP	10.79	□□□□□ -0.68
CCHCR1-222	ENST00000507459	CADM3	Q8N126	398 aa		10.79	□□□□□ -0.68
CCHCR1-222	ENST00000507459	GDPD1	Q8N9F7	314 aa		10.79	□□□□□ -0.68
CCHCR1-222	ENST00000507459	OR51S1	Q8NGJ8	323 aa		10.79	□□□□□ -0.68
CCHCR1-222	ENST00000507459	LSM10	Q969L4	123 aa	Known RBP	10.79	□□□□□ -0.68
CCHCR1-222	ENST00000507459	CCDC140	Q96MF4	163 aa		10.79	□□□□□ -0.68
CCHCR1-222	ENST00000507459	TMEM56	Q96MV1	263 aa		10.79	□□□□□ -0.68
CCHCR1-222	ENST00000507459	SOST	Q9BQB4	213 aa		10.79	□□□□□ -0.68
CCHCR1-222	ENST00000507459	RBM38	Q9H0Z9	239 aa	Known RBP	10.79	□□□□□ -0.68
CCHCR1-222	ENST00000507459	ZC4H2	Q9NQZ6	224 aa		10.79	□□□□□ -0.68
CCHCR1-222	ENST00000507459	TMEM14B	Q9NUH8	114 aa		10.79	□□□□□ -0.68
CCHCR1-222	ENST00000507459	THYN1	Q9P016	225 aa		10.79	□□□□□ -0.68
CCHCR1-222	ENST00000507459	PEMT	Q9UBM1	199 aa		10.79	□□□□□ -0.68
CCHCR1-222	ENST00000507459	C14orf166	Q9Y224	244 aa	Known RBP	10.79	□□□□□ -0.68
CCHCR1-222	ENST00000507459	DMRT1	Q9Y5R6	373 aa		10.79	□□□□□ -0.68
CCHCR1-222	ENST00000507459	DNAH9	Q9NYC9	4486 aa		10.79	□□□□□ -0.68
CCHCR1-222	ENST00000507459	IGHV3-21	A0A0B4J1V1	117 aa		10.78	□□□□□ -0.68
CCHCR1-222	ENST00000507459	CYB5B	O43169	146 aa		10.78	□□□□□ -0.68
CCHCR1-222	ENST00000507459	IGLV1-51	P01701	117 aa		10.78	□□□□□ -0.68
CCHCR1-222	ENST00000507459	CSN3	P07498	182 aa		10.78	□□□□□ -0.68
CCHCR1-222	ENST00000507459	S100A5	P33763	92 aa		10.78	□□□□□ -0.68
CCHCR1-222	ENST00000507459	AKR1C2	P52895	323 aa		10.78	□□□□□ -0.68
CCHCR1-222	ENST00000507459	KLK9	Q2XQG4	91 aa		10.78	□□□□□ -0.68
CCHCR1-222	ENST00000507459	PYDC2	Q56P42	97 aa		10.78	□□□□□ -0.68
CCHCR1-222	ENST00000507459	OR5B3	Q8NH48	314 aa		10.78	□□□□□ -0.68
CCHCR1-222	ENST00000507459	CXorf58	Q96LI9	332 aa		10.78	□□□□□ -0.68
CCHCR1-222	ENST00000507459	B9D2	Q9BPU9	175 aa		10.78	□□□□□ -0.68
CCHCR1-222	ENST00000507459	RTBDN	Q9BSG5	229 aa	Predicted RBP	10.78	□□□□□ -0.68
CCHCR1-222	ENST00000507459	THAP7	Q9BT49	309 aa	Predicted RBP	10.78	□□□□□ -0.68
CCHCR1-222	ENST00000507459	MCUB	Q9NWR8	336 aa		10.78	□□□□□ -0.68
CCHCR1-222	ENST00000507459	KLK9	Q9UKQ9	250 aa		10.78	□□□□□ -0.68
CCHCR1-222	ENST00000507459	TRBV7-1	A0A0A6YYK4	115 aa		10.77	□□□□□ -0.69
CCHCR1-222	ENST00000507459	TEX13D	A0A0J9YY54	714 aa	Predicted RBP	10.77	□□□□□ -0.69
CCHCR1-222	ENST00000507459	CLEC3B	P05452	202 aa		10.77	□□□□□ -0.69
CCHCR1-222	ENST00000507459	GPR183	P32249	361 aa		10.77	□□□□□ -0.69
CCHCR1-222	ENST00000507459	RNASE11	Q8TAA1	199 aa	Known RBP	10.77	□□□□□ -0.69
CCHCR1-222	ENST00000507459	PRRT1	Q99946	306 aa		10.77	□□□□□ -0.69
CCHCR1-222	ENST00000507459	F11R	Q9Y624	299 aa	Known RBP	10.77	□□□□□ -0.69
CCHCR1-222	ENST00000507459	SMAD5-AS1	Q9Y6J3	95 aa		10.77	□□□□□ -0.69
CCHCR1-222	ENST00000507459	ZNF320	A2RRD8	509 aa		10.76	□□□□□ -0.69
CCHCR1-222	ENST00000507459	ATG12	O94817	140 aa		10.76	□□□□□ -0.69
CCHCR1-222	ENST00000507459	IGKV1-5	P01602	117 aa		10.76	□□□□□ -0.69
CCHCR1-222	ENST00000507459	OR5AC1	P0C628	307 aa		10.76	□□□□□ -0.69
CCHCR1-222	ENST00000507459	MFAP2	P55001	183 aa		10.76	□□□□□ -0.69

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