RNA–Protein interactions for RNA: ENST00000505315.1

HMGB1P22-201, Transcript of high mobility group box 1 pseudogene 22, humanhuman

BASIC

Gene HMGB1P22, Length 124 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P22-201ENST00000505315 EIF5AP63241 154 aaKnown RBP2.4□□□□□ -2.03
HMGB1P22-201ENST00000505315 LDLRAD2Q5SZI1 272 aa2.4□□□□□ -2.03
HMGB1P22-201ENST00000505315 SLC25A34Q6PIV7 304 aa2.4□□□□□ -2.03
HMGB1P22-201ENST00000505315 HRCT1Q6UXD1 115 aa2.4□□□□□ -2.03
HMGB1P22-201ENST00000505315 ZFP2Q6ZN57 461 aa2.4□□□□□ -2.03
HMGB1P22-201ENST00000505315 ZNF705AQ6ZN79 300 aaPredicted RBP2.4□□□□□ -2.03
HMGB1P22-201ENST00000505315 LCA10Q71F78 164 aa2.4□□□□□ -2.03
HMGB1P22-201ENST00000505315 LYZL2Q7Z4W2 148 aa2.4□□□□□ -2.03
HMGB1P22-201ENST00000505315 KTN1-AS1Q86SY8 53 aa2.4□□□□□ -2.03
HMGB1P22-201ENST00000505315 KRTAP19-1Q8IUB9 90 aa2.4□□□□□ -2.03
HMGB1P22-201ENST00000505315 OR8I2Q8N0Y5 310 aa2.4□□□□□ -2.03
HMGB1P22-201ENST00000505315 C12orf45Q8N5I9 185 aaPredicted RBP2.4□□□□□ -2.03
HMGB1P22-201ENST00000505315 ZFAND2AQ8N6M9 145 aa2.4□□□□□ -2.03
HMGB1P22-201ENST00000505315 ZNF433Q8N7K0 673 aaPredicted RBP2.4□□□□□ -2.03
HMGB1P22-201ENST00000505315 C9orf106Q8NAJ2 232 aa2.4□□□□□ -2.03
HMGB1P22-201ENST00000505315 FNDC9Q8TBE3 224 aa2.4□□□□□ -2.03
HMGB1P22-201ENST00000505315 SEC22CQ9BRL7 303 aa2.4□□□□□ -2.03
HMGB1P22-201ENST00000505315 TTTY13Q9BZ97 58 aa2.4□□□□□ -2.03
HMGB1P22-201ENST00000505315 SMIM3Q9BZL3 60 aa2.4□□□□□ -2.03
HMGB1P22-201ENST00000505315 OR5V1Q9UGF6 321 aa2.4□□□□□ -2.03
HMGB1P22-201ENST00000505315 LINC00588Q9Y4M8 146 aa2.4□□□□□ -2.03
HMGB1P22-201ENST00000505315 IGSF9BQ9UPX0 1349 aa2.4□□□□□ -2.03
HMGB1P22-201ENST00000505315 ERCC6Q03468 1493 aa2.39□□□□□ -2.03
HMGB1P22-201ENST00000505315 KIF26BQ2KJY2 2108 aa2.39□□□□□ -2.03
HMGB1P22-201ENST00000505315 RFX7Q2KHR2 1363 aa2.39□□□□□ -2.03
HMGB1P22-201ENST00000505315 IGKV1D-43A0A0B4J1Z2 117 aa2.39□□□□□ -2.03
HMGB1P22-201ENST00000505315 A0A1B0GV90 55 aa2.39□□□□□ -2.03
HMGB1P22-201ENST00000505315 DHRS12A0PJE2 317 aa2.39□□□□□ -2.03
HMGB1P22-201ENST00000505315 GRIFINA4D1Z8 144 aa2.39□□□□□ -2.03
HMGB1P22-201ENST00000505315 FABP5P3A8MUU1 101 aa2.39□□□□□ -2.03
HMGB1P22-201ENST00000505315 M0R2Z0 102 aa2.39□□□□□ -2.03
HMGB1P22-201ENST00000505315 UBFD1O14562 309 aaKnown RBP2.39□□□□□ -2.03
HMGB1P22-201ENST00000505315 TAX1BP3O14907 124 aa2.39□□□□□ -2.03
HMGB1P22-201ENST00000505315 LECT2O14960 151 aa2.39□□□□□ -2.03
HMGB1P22-201ENST00000505315 LEPROTO15243 131 aa2.39□□□□□ -2.03
HMGB1P22-201ENST00000505315 OR2T1O43869 369 aa2.39□□□□□ -2.03
HMGB1P22-201ENST00000505315 LY6HO94772 140 aa2.39□□□□□ -2.03
HMGB1P22-201ENST00000505315 LHBP01229 141 aa2.39□□□□□ -2.03
HMGB1P22-201ENST00000505315 IGHV1-69P01742 117 aa2.39□□□□□ -2.03
HMGB1P22-201ENST00000505315 BCL2P10415 239 aa2.39□□□□□ -2.03
HMGB1P22-201ENST00000505315 RPS3P23396 243 aaKnown RBP eCLIP2.39□□□□□ -2.03
HMGB1P22-201ENST00000505315 KLF3P57682 345 aaPredicted RBP2.39□□□□□ -2.03
HMGB1P22-201ENST00000505315 YPEL3P61236 119 aaPredicted RBP2.39□□□□□ -2.03
HMGB1P22-201ENST00000505315 RPS11P62280 158 aaKnown RBP eCLIP2.39□□□□□ -2.03
HMGB1P22-201ENST00000505315 HIST1H4AP62805 103 aaKnown RBP2.39□□□□□ -2.03
HMGB1P22-201ENST00000505315 AKR1C1Q04828 323 aa2.39□□□□□ -2.03
HMGB1P22-201ENST00000505315 RTL8BQ17RB0 113 aa2.39□□□□□ -2.03
HMGB1P22-201ENST00000505315 DEFB115Q30KQ5 88 aa2.39□□□□□ -2.03
HMGB1P22-201ENST00000505315 SPANXN3Q5MJ09 141 aa2.39□□□□□ -2.03
HMGB1P22-201ENST00000505315 DNLZQ5SXM8 178 aa2.39□□□□□ -2.03
HMGB1P22-201ENST00000505315 ZNF322Q6U7Q0 402 aaPredicted RBP2.39□□□□□ -2.03
HMGB1P22-201ENST00000505315 CNEP1R1Q8N9A8 125 aa2.39□□□□□ -2.03
HMGB1P22-201ENST00000505315 TMEM229BQ8NBD8 167 aa2.39□□□□□ -2.03
HMGB1P22-201ENST00000505315 NUP35Q8NFH5 326 aa2.39□□□□□ -2.03
HMGB1P22-201ENST00000505315 BPIFB6Q8NFQ5 453 aa2.39□□□□□ -2.03
HMGB1P22-201ENST00000505315 OR5A1Q8NGJ0 315 aa2.39□□□□□ -2.03
HMGB1P22-201ENST00000505315 MIEN1Q9BRT3 115 aa2.39□□□□□ -2.03
HMGB1P22-201ENST00000505315 RTL8AQ9BWD3 113 aa2.39□□□□□ -2.03
HMGB1P22-201ENST00000505315 OR2H1Q9GZK4 316 aa2.39□□□□□ -2.03
HMGB1P22-201ENST00000505315 TPT1P8Q9HAU6 139 aa2.39□□□□□ -2.03
HMGB1P22-201ENST00000505315 MED31Q9Y3C7 131 aa2.39□□□□□ -2.03
HMGB1P22-201ENST00000505315 RBM7Q9Y580 266 aaKnown RBP2.39□□□□□ -2.03
HMGB1P22-201ENST00000505315 PTPRTO14522 1441 aa2.39□□□□□ -2.03
HMGB1P22-201ENST00000505315 TSPOAP1O95153 1857 aa2.39□□□□□ -2.03
HMGB1P22-201ENST00000505315 TET2Q6N021 2002 aaPredicted RBP2.39□□□□□ -2.03
HMGB1P22-201ENST00000505315 NOTCH4Q99466 2003 aa2.39□□□□□ -2.03
HMGB1P22-201ENST00000505315 HECW1Q76N89 1606 aa2.39□□□□□ -2.03
HMGB1P22-201ENST00000505315 A0A087WX48 190 aa2.38□□□□□ -2.03
HMGB1P22-201ENST00000505315 LOC102725191A0A1B0GVB3 256 aa2.38□□□□□ -2.03
HMGB1P22-201ENST00000505315 A0A1B0GX51 115 aa2.38□□□□□ -2.03
HMGB1P22-201ENST00000505315 TRDV1A0A1B0GX56 115 aa2.38□□□□□ -2.03
HMGB1P22-201ENST00000505315 ODAMA1E959 279 aa2.38□□□□□ -2.03
HMGB1P22-201ENST00000505315 ZNF860A6NHJ4 632 aa2.38□□□□□ -2.03
HMGB1P22-201ENST00000505315 GABARAPH6UMI1 98 aa2.38□□□□□ -2.03
HMGB1P22-201ENST00000505315 NDUFB2O95178 105 aa2.38□□□□□ -2.03
HMGB1P22-201ENST00000505315 WISP3O95389 354 aaPredicted RBP2.38□□□□□ -2.03
HMGB1P22-201ENST00000505315 CDS2O95674 445 aa2.38□□□□□ -2.03
HMGB1P22-201ENST00000505315 SOD1P00441 154 aa2.38□□□□□ -2.03
HMGB1P22-201ENST00000505315 APOC1P02654 83 aa2.38□□□□□ -2.03
HMGB1P22-201ENST00000505315 TRGC2P03986 189 aa2.38□□□□□ -2.03
HMGB1P22-201ENST00000505315 LGALS3P17931 250 aaKnown RBP2.38□□□□□ -2.03
HMGB1P22-201ENST00000505315 CCR2P41597 374 aa2.38□□□□□ -2.03
HMGB1P22-201ENST00000505315 NOVP48745 357 aa2.38□□□□□ -2.03
HMGB1P22-201ENST00000505315 VEGFCP49767 419 aa2.38□□□□□ -2.03
HMGB1P22-201ENST00000505315 ZNF80P51504 273 aaPredicted RBP2.38□□□□□ -2.03
HMGB1P22-201ENST00000505315 NDUFA6P56556 154 aa2.38□□□□□ -2.03
HMGB1P22-201ENST00000505315 RPS28P62857 69 aaKnown RBP2.38□□□□□ -2.03
HMGB1P22-201ENST00000505315 RPL18Q07020 188 aaKnown RBP2.38□□□□□ -2.03
HMGB1P22-201ENST00000505315 WHAMMP3Q1A5X7 153 aa2.38□□□□□ -2.03
HMGB1P22-201ENST00000505315 RRN3P1Q2M238 152 aa2.38□□□□□ -2.03
HMGB1P22-201ENST00000505315 Q6ZR54 194 aa2.38□□□□□ -2.03
HMGB1P22-201ENST00000505315 SSH2Q76I76 1423 aa2.38□□□□□ -2.03
HMGB1P22-201ENST00000505315 TCTE3Q8IZS6 198 aa2.38□□□□□ -2.03
HMGB1P22-201ENST00000505315 OR8D4Q8NGM9 314 aa2.38□□□□□ -2.03
HMGB1P22-201ENST00000505315 UBALD1Q8TB05 177 aa2.38□□□□□ -2.03
HMGB1P22-201ENST00000505315 CANT1Q8WVQ1 401 aa2.38□□□□□ -2.03
HMGB1P22-201ENST00000505315 GPX7Q96SL4 187 aaPredicted RBP2.38□□□□□ -2.03
HMGB1P22-201ENST00000505315 SLC25A21Q9BQT8 299 aaPredicted RBP2.38□□□□□ -2.03
HMGB1P22-201ENST00000505315 YIPF3Q9GZM5 350 aa2.38□□□□□ -2.03
HMGB1P22-201ENST00000505315 TUBA4BQ9H853 241 aa2.38□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 96.4 ms