RNA–Protein interactions for RNA: ENST00000498136.5

ABCF3-218, Transcript of ATP binding cassette subfamily F member 3, humanhuman

TSL 2

Gene ABCF3, Length 1,014 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCF3-218ENST00000498136 DNAH3Q8TD57 4116 aa12.84□□□□□ -0.35
ABCF3-218ENST00000498136 PRKDCP78527 4128 aaKnown RBP12.83□□□□□ -0.36
ABCF3-218ENST00000498136 C3orf85A0A1B0GTC6 90 aa12.83□□□□□ -0.36
ABCF3-218ENST00000498136 ANKRD20A5PA0PJZ0 165 aa12.83□□□□□ -0.36
ABCF3-218ENST00000498136 H0Y980 276 aa12.83□□□□□ -0.36
ABCF3-218ENST00000498136 CRYGCP07315 174 aa12.83□□□□□ -0.36
ABCF3-218ENST00000498136 HIST1H1BP16401 226 aaKnown RBP12.83□□□□□ -0.36
ABCF3-218ENST00000498136 PTBP1P26599 531 aaKnown RBP eCLIP12.83□□□□□ -0.36
ABCF3-218ENST00000498136 MECP2P51608 486 aaKnown RBP12.83□□□□□ -0.36
ABCF3-218ENST00000498136 TATDN3Q17R31 274 aa12.83□□□□□ -0.36
ABCF3-218ENST00000498136 TRIM16LQ309B1 348 aa12.83□□□□□ -0.36
ABCF3-218ENST00000498136 THOC7Q6I9Y2 204 aaKnown RBP12.83□□□□□ -0.36
ABCF3-218ENST00000498136 OR10W1Q8NGF6 305 aa12.83□□□□□ -0.36
ABCF3-218ENST00000498136 OR4A16Q8NH70 328 aa12.83□□□□□ -0.36
ABCF3-218ENST00000498136 SEC22AQ96IW7 307 aa12.83□□□□□ -0.36
ABCF3-218ENST00000498136 TP53RKQ96S44 253 aa12.83□□□□□ -0.36
ABCF3-218ENST00000498136 SRSF8Q9BRL6 282 aaKnown RBP12.83□□□□□ -0.36
ABCF3-218ENST00000498136 THAP7Q9BT49 309 aaPredicted RBP12.83□□□□□ -0.36
ABCF3-218ENST00000498136 MCUBQ9NWR8 336 aa12.83□□□□□ -0.36
ABCF3-218ENST00000498136 FKBP11Q9NYL4 201 aa12.83□□□□□ -0.36
ABCF3-218ENST00000498136 IGLC7A0M8Q6 106 aa12.82□□□□□ -0.36
ABCF3-218ENST00000498136 CYB5BO43169 146 aa12.82□□□□□ -0.36
ABCF3-218ENST00000498136 NDUFB8O95169 186 aa12.82□□□□□ -0.36
ABCF3-218ENST00000498136 IGKV1-39P01597 117 aa12.82□□□□□ -0.36
ABCF3-218ENST00000498136 IGHV3-23P01764 117 aa12.82□□□□□ -0.36
ABCF3-218ENST00000498136 IGKV1D-39P04432 117 aa12.82□□□□□ -0.36
ABCF3-218ENST00000498136 CTSDP07339 412 aaPredicted RBP12.82□□□□□ -0.36
ABCF3-218ENST00000498136 OR13C7P0DN81 318 aa12.82□□□□□ -0.36
ABCF3-218ENST00000498136 AKR1C2P52895 323 aa12.82□□□□□ -0.36
ABCF3-218ENST00000498136 SYNJ2BPP57105 145 aa12.82□□□□□ -0.36
ABCF3-218ENST00000498136 OR51S1Q8NGJ8 323 aa12.82□□□□□ -0.36
ABCF3-218ENST00000498136 FANCD2OSQ96PS1 177 aa12.82□□□□□ -0.36
ABCF3-218ENST00000498136 PRR25Q96S07 402 aa12.82□□□□□ -0.36
ABCF3-218ENST00000498136 PRRT1Q99946 306 aa12.82□□□□□ -0.36
ABCF3-218ENST00000498136 SOSTQ9BQB4 213 aa12.82□□□□□ -0.36
ABCF3-218ENST00000498136 SCP2D1Q9UJQ7 156 aa12.82□□□□□ -0.36
ABCF3-218ENST00000498136 S4R3C0 116 aa12.82□□□□□ -0.36
ABCF3-218ENST00000498136 TEX13DA0A0J9YY54 714 aaPredicted RBP12.81□□□□□ -0.36
ABCF3-218ENST00000498136 C15orf61A6NNL5 157 aa12.81□□□□□ -0.36
ABCF3-218ENST00000498136 ATG12O94817 140 aa12.81□□□□□ -0.36
ABCF3-218ENST00000498136 SP6Q3SY56 376 aa12.81□□□□□ -0.36
ABCF3-218ENST00000498136 FAM209BQ5JX69 171 aa12.81□□□□□ -0.36
ABCF3-218ENST00000498136 HSD17B13Q7Z5P4 300 aaPredicted RBP12.81□□□□□ -0.36
ABCF3-218ENST00000498136 CADM3Q8N126 398 aa12.81□□□□□ -0.36
ABCF3-218ENST00000498136 Q8N402 240 aa12.81□□□□□ -0.36
ABCF3-218ENST00000498136 RNASE11Q8TAA1 199 aaKnown RBP12.81□□□□□ -0.36
ABCF3-218ENST00000498136 LSM10Q969L4 123 aaKnown RBP12.81□□□□□ -0.36
ABCF3-218ENST00000498136 EEF1AKMT3Q96AZ1 226 aa12.81□□□□□ -0.36
ABCF3-218ENST00000498136 TMEM56Q96MV1 263 aa12.81□□□□□ -0.36
ABCF3-218ENST00000498136 NDUFA4L2Q9NRX3 87 aa12.81□□□□□ -0.36
ABCF3-218ENST00000498136 ZNF256Q9Y2P7 627 aaPredicted RBP12.81□□□□□ -0.36
ABCF3-218ENST00000498136 IGLV11-55A0A075B6I3 123 aa12.8□□□□□ -0.36
ABCF3-218ENST00000498136 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP12.8□□□□□ -0.36
ABCF3-218ENST00000498136 BMPR1BO00238 502 aa12.8□□□□□ -0.36
ABCF3-218ENST00000498136 FAUP35544 74 aaKnown RBP12.8□□□□□ -0.36
ABCF3-218ENST00000498136 KLF5Q13887 457 aaPredicted RBP12.8□□□□□ -0.36
ABCF3-218ENST00000498136 SURF2Q15527 256 aaPredicted RBP12.8□□□□□ -0.36
ABCF3-218ENST00000498136 SLC25A24Q6NUK1 477 aa12.8□□□□□ -0.36
ABCF3-218ENST00000498136 CLEC19AQ6UXS0 136 aa12.8□□□□□ -0.36
ABCF3-218ENST00000498136 GDPD1Q8N9F7 314 aa12.8□□□□□ -0.36
ABCF3-218ENST00000498136 OR9G4Q8NGQ1 327 aa12.8□□□□□ -0.36
ABCF3-218ENST00000498136 OR6Q1Q8NGQ2 317 aa12.8□□□□□ -0.36
ABCF3-218ENST00000498136 OR5B3Q8NH48 314 aa12.8□□□□□ -0.36
ABCF3-218ENST00000498136 TMEM14BQ9NUH8 114 aa12.8□□□□□ -0.36
ABCF3-218ENST00000498136 THYN1Q9P016 225 aa12.8□□□□□ -0.36
ABCF3-218ENST00000498136 V9GYH0 126 aa12.8□□□□□ -0.36
ABCF3-218ENST00000498136 DBX1A6NMT0 343 aa12.79□□□□□ -0.36
ABCF3-218ENST00000498136 PPP5D1E7EU14 171 aa12.79□□□□□ -0.36
ABCF3-218ENST00000498136 B3GALNT1O75752 331 aa12.79□□□□□ -0.36
ABCF3-218ENST00000498136 AP3S2P59780 193 aa12.79□□□□□ -0.36
ABCF3-218ENST00000498136 WT1-ASQ06250 92 aa12.79□□□□□ -0.36
ABCF3-218ENST00000498136 DCTN2Q13561 401 aaKnown RBP12.79□□□□□ -0.36
ABCF3-218ENST00000498136 SPANXN2Q5MJ10 180 aa12.79□□□□□ -0.36
ABCF3-218ENST00000498136 HAPLN4Q86UW8 402 aa12.79□□□□□ -0.36
ABCF3-218ENST00000498136 TOMM5Q8N4H5 51 aa12.79□□□□□ -0.36
ABCF3-218ENST00000498136 CXorf58Q96LI9 332 aa12.79□□□□□ -0.36
ABCF3-218ENST00000498136 RTBDNQ9BSG5 229 aaPredicted RBP12.79□□□□□ -0.36
ABCF3-218ENST00000498136 MFSD2BA6NFX1 497 aa12.78□□□□□ -0.36
ABCF3-218ENST00000498136 GGCTO75223 188 aaKnown RBP12.78□□□□□ -0.36
ABCF3-218ENST00000498136 HLA-AP01891 365 aaKnown RBP12.78□□□□□ -0.36
ABCF3-218ENST00000498136 OR5AC1P0C628 307 aa12.78□□□□□ -0.36
ABCF3-218ENST00000498136 ARL3P36405 182 aa12.78□□□□□ -0.36
ABCF3-218ENST00000498136 IZUMO4Q1ZYL8 232 aa12.78□□□□□ -0.36
ABCF3-218ENST00000498136 CCDC190Q86UF4 302 aa12.78□□□□□ -0.36
ABCF3-218ENST00000498136 RRNAD1Q96FB5 475 aaKnown RBP12.78□□□□□ -0.36
ABCF3-218ENST00000498136 CCDC140Q96MF4 163 aa12.78□□□□□ -0.36
ABCF3-218ENST00000498136 SCGB3A2Q96PL1 93 aa12.78□□□□□ -0.36
ABCF3-218ENST00000498136 C5orf66Q9H5L9 145 aa12.78□□□□□ -0.36
ABCF3-218ENST00000498136 NAA60Q9H7X0 242 aa12.78□□□□□ -0.36
ABCF3-218ENST00000498136 SLC2A8Q9NY64 477 aa12.78□□□□□ -0.36
ABCF3-218ENST00000498136 PEMTQ9UBM1 199 aa12.78□□□□□ -0.36
ABCF3-218ENST00000498136 GPR132Q9UNW8 380 aa12.78□□□□□ -0.36
ABCF3-218ENST00000498136 TGP01266 2768 aa12.78□□□□□ -0.36
ABCF3-218ENST00000498136 TRBV7-1A0A0A6YYK4 115 aa12.77□□□□□ -0.37
ABCF3-218ENST00000498136 IGKV1-5P01602 117 aa12.77□□□□□ -0.37
ABCF3-218ENST00000498136 SPNP16150 400 aa12.77□□□□□ -0.37
ABCF3-218ENST00000498136 UCP1P25874 307 aa12.77□□□□□ -0.37
ABCF3-218ENST00000498136 ZNF79Q15937 498 aa12.77□□□□□ -0.37
ABCF3-218ENST00000498136 PDCD10Q9BUL8 212 aa12.77□□□□□ -0.37
ABCF3-218ENST00000498136 NDUFA13Q9P0J0 144 aa12.77□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms