RNA–Protein interactions for RNA: ENST00000492793.1

CLK1-213, Transcript of CDC like kinase 1, humanhuman

TSL 4

Gene CLK1, Length 596 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-213ENST00000492793 MOGQ16653 247 aa1.33□□□□□ -2.2
CLK1-213ENST00000492793 NDUFA5Q16718 116 aa1.33□□□□□ -2.2
CLK1-213ENST00000492793 CCDC122Q5T0U0 273 aa1.33□□□□□ -2.2
CLK1-213ENST00000492793 FP248Q71RG6 208 aaPredicted RBP1.33□□□□□ -2.2
CLK1-213ENST00000492793 GPR32P1Q8NGA4 272 aa1.33□□□□□ -2.2
CLK1-213ENST00000492793 OR2T4Q8NH00 348 aa1.33□□□□□ -2.2
CLK1-213ENST00000492793 HSPB9Q9BQS6 159 aa1.33□□□□□ -2.2
CLK1-213ENST00000492793 OR8D2Q9GZM6 311 aa1.33□□□□□ -2.2
CLK1-213ENST00000492793 EFCAB1Q9HAE3 211 aa1.33□□□□□ -2.2
CLK1-213ENST00000492793 IL36BQ9NZH7 164 aa1.33□□□□□ -2.2
CLK1-213ENST00000492793 GUCA1BQ9UMX6 200 aa1.33□□□□□ -2.2
CLK1-213ENST00000492793 MICAL3Q7RTP6 2002 aa1.33□□□□□ -2.2
CLK1-213ENST00000492793 TGIF2-C20orf24A0A0A6YYL0 155 aa1.32□□□□□ -2.2
CLK1-213ENST00000492793 A0A0J9YY10 115 aa1.32□□□□□ -2.2
CLK1-213ENST00000492793 A0A1B0GX78 115 aa1.32□□□□□ -2.2
CLK1-213ENST00000492793 F8W036 122 aa1.32□□□□□ -2.2
CLK1-213ENST00000492793 INMT-MINDY4F8WBC2 141 aa1.32□□□□□ -2.2
CLK1-213ENST00000492793 KCNK1O00180 336 aa1.32□□□□□ -2.2
CLK1-213ENST00000492793 SDCBPO00560 298 aaPredicted RBP1.32□□□□□ -2.2
CLK1-213ENST00000492793 IGHV3-7P01780 117 aa1.32□□□□□ -2.2
CLK1-213ENST00000492793 RPSAP08865 295 aaKnown RBP1.32□□□□□ -2.2
CLK1-213ENST00000492793 EVX1P49640 407 aa1.32□□□□□ -2.2
CLK1-213ENST00000492793 RPL18Q07020 188 aaKnown RBP1.32□□□□□ -2.2
CLK1-213ENST00000492793 PMAIP1Q13794 54 aa1.32□□□□□ -2.2
CLK1-213ENST00000492793 GUK1Q16774 197 aa1.32□□□□□ -2.2
CLK1-213ENST00000492793 ARHGAP11BQ3KRB8 267 aa1.32□□□□□ -2.2
CLK1-213ENST00000492793 SFXN4Q6P4A7 337 aa1.32□□□□□ -2.2
CLK1-213ENST00000492793 IQCF2Q8IXL9 164 aa1.32□□□□□ -2.2
CLK1-213ENST00000492793 KLK6Q92876 244 aa1.32□□□□□ -2.2
CLK1-213ENST00000492793 OPTNQ96CV9 577 aa1.32□□□□□ -2.2
CLK1-213ENST00000492793 RP1P56715 2156 aa1.32□□□□□ -2.2
CLK1-213ENST00000492793 ARFGEF3Q5TH69 2177 aa1.32□□□□□ -2.2
CLK1-213ENST00000492793 BRWD1Q9NSI6 2320 aa1.32□□□□□ -2.2
CLK1-213ENST00000492793 TRBV10-2A0A0K0K1G8 114 aa1.31□□□□□ -2.2
CLK1-213ENST00000492793 OR51F1A6NGY5 319 aa1.31□□□□□ -2.2
CLK1-213ENST00000492793 SMIM23A6NLE4 172 aa1.31□□□□□ -2.2
CLK1-213ENST00000492793 EEF1E1-BLOC1S5C9J1V9 151 aa1.31□□□□□ -2.2
CLK1-213ENST00000492793 IFNA5P01569 189 aa1.31□□□□□ -2.2
CLK1-213ENST00000492793 ANGP03950 147 aaKnown RBP1.31□□□□□ -2.2
CLK1-213ENST00000492793 PRM2P04554 102 aa1.31□□□□□ -2.2
CLK1-213ENST00000492793 FGF6P10767 208 aa1.31□□□□□ -2.2
CLK1-213ENST00000492793 RPS4Y1P22090 263 aaKnown RBP1.31□□□□□ -2.2
CLK1-213ENST00000492793 NFYAP23511 347 aaPredicted RBP1.31□□□□□ -2.2
CLK1-213ENST00000492793 SPCS3P61009 180 aa1.31□□□□□ -2.2
CLK1-213ENST00000492793 RAB5BP61020 215 aa1.31□□□□□ -2.2
CLK1-213ENST00000492793 DYNAPQ8N1N2 210 aa1.31□□□□□ -2.2
CLK1-213ENST00000492793 OR8B3Q8NGG8 313 aa1.31□□□□□ -2.2
CLK1-213ENST00000492793 MCFD2Q8NI22 146 aa1.31□□□□□ -2.2
CLK1-213ENST00000492793 ARL5BQ96KC2 179 aa1.31□□□□□ -2.2
CLK1-213ENST00000492793 WDR61Q9GZS3 305 aaKnown RBP1.31□□□□□ -2.2
CLK1-213ENST00000492793 SOX21Q9Y651 276 aaPredicted RBP1.31□□□□□ -2.2
CLK1-213ENST00000492793 SCAF11Q99590 1463 aaKnown RBP1.31□□□□□ -2.2
CLK1-213ENST00000492793 LAMB2P55268 1798 aa1.3□□□□□ -2.2
CLK1-213ENST00000492793 IGKV2-40A0A087WW87 121 aaPredicted RBP1.3□□□□□ -2.2
CLK1-213ENST00000492793 IRGMA1A4Y4 181 aa1.3□□□□□ -2.2
CLK1-213ENST00000492793 FABP5P3A8MUU1 101 aa1.3□□□□□ -2.2
CLK1-213ENST00000492793 TRAPPC2LH3BP13 241 aa1.3□□□□□ -2.2
CLK1-213ENST00000492793 IGKV2D-40P01614 121 aaPredicted RBP1.3□□□□□ -2.2
CLK1-213ENST00000492793 LYNX1P0DP58 116 aa1.3□□□□□ -2.2
CLK1-213ENST00000492793 NKX2-5P52952 324 aaPredicted RBP1.3□□□□□ -2.2
CLK1-213ENST00000492793 CDK5R1Q15078 307 aa1.3□□□□□ -2.2
CLK1-213ENST00000492793 WFDC11Q8NEX6 87 aa1.3□□□□□ -2.2
CLK1-213ENST00000492793 CISHQ9NSE2 258 aa1.3□□□□□ -2.2
CLK1-213ENST00000492793 CMTM6Q9NX76 183 aa1.3□□□□□ -2.2
CLK1-213ENST00000492793 DCCP43146 1447 aa1.3□□□□□ -2.2
CLK1-213ENST00000492793 IGKV3D-7A0A0C4DH55 119 aa1.29□□□□□ -2.2
CLK1-213ENST00000492793 IGKV3OR2-268A0A0C4DH90 116 aa1.29□□□□□ -2.2
CLK1-213ENST00000492793 M0R036 132 aa1.29□□□□□ -2.2
CLK1-213ENST00000492793 PSMD12O00232 456 aaPredicted RBP1.29□□□□□ -2.2
CLK1-213ENST00000492793 AHSA1O95433 338 aa1.29□□□□□ -2.2
CLK1-213ENST00000492793 PMP2P02689 132 aa1.29□□□□□ -2.2
CLK1-213ENST00000492793 C1QAP02745 245 aa1.29□□□□□ -2.2
CLK1-213ENST00000492793 METTL15P1P0C7V9 234 aa1.29□□□□□ -2.2
CLK1-213ENST00000492793 HIST1H1EP10412 219 aaKnown RBP1.29□□□□□ -2.2
CLK1-213ENST00000492793 CD79AP11912 226 aa1.29□□□□□ -2.2
CLK1-213ENST00000492793 SUPT4H1P63272 117 aaKnown RBP1.29□□□□□ -2.2
CLK1-213ENST00000492793 SURF2Q15527 256 aaPredicted RBP1.29□□□□□ -2.2
CLK1-213ENST00000492793 Q1T7F1 81 aa1.29□□□□□ -2.2
CLK1-213ENST00000492793 AADACL3Q5VUY0 350 aa1.29□□□□□ -2.2
CLK1-213ENST00000492793 PTRHD1Q6GMV3 140 aaKnown RBP1.29□□□□□ -2.2
CLK1-213ENST00000492793 Q6ZS49 121 aa1.29□□□□□ -2.2
CLK1-213ENST00000492793 AAED1Q7RTV5 226 aa1.29□□□□□ -2.2
CLK1-213ENST00000492793 C10orf105Q8TEF2 133 aa1.29□□□□□ -2.2
CLK1-213ENST00000492793 SLC35B4Q969S0 331 aa1.29□□□□□ -2.2
CLK1-213ENST00000492793 GINS4Q9BRT9 223 aa1.29□□□□□ -2.2
CLK1-213ENST00000492793 BAIAP2Q9UQB8 552 aa1.29□□□□□ -2.2
CLK1-213ENST00000492793 KIF24Q5T7B8 1368 aa1.29□□□□□ -2.2
CLK1-213ENST00000492793 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP1.28□□□□□ -2.2
CLK1-213ENST00000492793 IBA57-AS1B1ANH7 110 aa1.28□□□□□ -2.2
CLK1-213ENST00000492793 NIPSNAP2O75323 286 aa1.28□□□□□ -2.2
CLK1-213ENST00000492793 OR5G3P0C626 314 aa1.28□□□□□ -2.2
CLK1-213ENST00000492793 ARL14EPLP0DKL9 152 aa1.28□□□□□ -2.2
CLK1-213ENST00000492793 FXYD2P54710 66 aa1.28□□□□□ -2.2
CLK1-213ENST00000492793 HBA1P69905 142 aa1.28□□□□□ -2.2
CLK1-213ENST00000492793 RUNX1Q01196 453 aa1.28□□□□□ -2.2
CLK1-213ENST00000492793 IFITM2Q01629 132 aa1.28□□□□□ -2.2
CLK1-213ENST00000492793 HIST3H3Q16695 136 aa1.28□□□□□ -2.2
CLK1-213ENST00000492793 DCXRQ7Z4W1 244 aa1.28□□□□□ -2.2
CLK1-213ENST00000492793 DHFR2Q86XF0 187 aa1.28□□□□□ -2.2
CLK1-213ENST00000492793 BPIFA4PQ86YQ2 179 aa1.28□□□□□ -2.2
Retrieved 100 of 20,778 RNA–protein pairs in 56 ms