RNA–Protein interactions for RNA: ENST00000490099.5

TMEM39A-210, Transcript of transmembrane protein 39A, humanhuman

TSL 3

Gene TMEM39A, Length 868 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM39A-210ENST00000490099 DEFB114Q30KQ6 69 aa7.36□□□□□ -1.23
TMEM39A-210ENST00000490099 TRIQKQ629K1 86 aa7.36□□□□□ -1.23
TMEM39A-210ENST00000490099 OR4A47Q6IF82 309 aa7.36□□□□□ -1.23
TMEM39A-210ENST00000490099 CD300LFQ8TDQ1 290 aa7.36□□□□□ -1.23
TMEM39A-210ENST00000490099 SMIM4Q8WVI0 70 aa7.36□□□□□ -1.23
TMEM39A-210ENST00000490099 SECTM1Q8WVN6 248 aa7.36□□□□□ -1.23
TMEM39A-210ENST00000490099 CCDC140Q96MF4 163 aa7.36□□□□□ -1.23
TMEM39A-210ENST00000490099 RSRP1Q9BUV0 290 aa7.36□□□□□ -1.23
TMEM39A-210ENST00000490099 SRRQ9GZT4 340 aa7.36□□□□□ -1.23
TMEM39A-210ENST00000490099 PALMDQ9NP74 551 aa7.36□□□□□ -1.23
TMEM39A-210ENST00000490099 ZC4H2Q9NQZ6 224 aa7.36□□□□□ -1.23
TMEM39A-210ENST00000490099 FBXL7Q9UJT9 491 aa7.36□□□□□ -1.23
TMEM39A-210ENST00000490099 TNFSF12O43508 249 aa7.35□□□□□ -1.23
TMEM39A-210ENST00000490099 GGCTO75223 188 aaKnown RBP7.35□□□□□ -1.23
TMEM39A-210ENST00000490099 PGLYRP1O75594 196 aaPredicted RBP7.35□□□□□ -1.23
TMEM39A-210ENST00000490099 GHRHP01286 108 aa7.35□□□□□ -1.23
TMEM39A-210ENST00000490099 AP3S2P59780 193 aa7.35□□□□□ -1.23
TMEM39A-210ENST00000490099 ZNF79Q15937 498 aa7.35□□□□□ -1.23
TMEM39A-210ENST00000490099 LCN12Q6JVE5 192 aa7.35□□□□□ -1.23
TMEM39A-210ENST00000490099 ZNF818PQ6ZRF7 136 aa7.35□□□□□ -1.23
TMEM39A-210ENST00000490099 GPX8Q8TED1 209 aa7.35□□□□□ -1.23
TMEM39A-210ENST00000490099 DEDD2Q8WXF8 326 aa7.35□□□□□ -1.23
TMEM39A-210ENST00000490099 MOB3AQ96BX8 217 aa7.35□□□□□ -1.23
TMEM39A-210ENST00000490099 ABHD1Q96SE0 405 aa7.35□□□□□ -1.23
TMEM39A-210ENST00000490099 EDA2RQ9HAV5 297 aa7.35□□□□□ -1.23
TMEM39A-210ENST00000490099 IFT46Q9NQC8 304 aa7.35□□□□□ -1.23
TMEM39A-210ENST00000490099 COMMD9Q9P000 198 aa7.35□□□□□ -1.23
TMEM39A-210ENST00000490099 PEMTQ9UBM1 199 aa7.35□□□□□ -1.23
TMEM39A-210ENST00000490099 TRAV3A0A0B4J244 114 aa7.34□□□□□ -1.23
TMEM39A-210ENST00000490099 C2orf70A6NJV1 201 aa7.34□□□□□ -1.23
TMEM39A-210ENST00000490099 UPK1BO75841 260 aa7.34□□□□□ -1.23
TMEM39A-210ENST00000490099 OR2C1O95371 312 aa7.34□□□□□ -1.23
TMEM39A-210ENST00000490099 C8orf88P0DMB2 117 aa7.34□□□□□ -1.23
TMEM39A-210ENST00000490099 MYOD1P15172 320 aa7.34□□□□□ -1.23
TMEM39A-210ENST00000490099 NQO2P16083 231 aa7.34□□□□□ -1.23
TMEM39A-210ENST00000490099 HIST1H1BP16401 226 aaKnown RBP7.34□□□□□ -1.23
TMEM39A-210ENST00000490099 RCVRNP35243 200 aa7.34□□□□□ -1.23
TMEM39A-210ENST00000490099 RFX2P48378 723 aa7.34□□□□□ -1.23
TMEM39A-210ENST00000490099 CATR1Q13166 79 aa7.34□□□□□ -1.23
TMEM39A-210ENST00000490099 CD300EQ496F6 205 aaPredicted RBP7.34□□□□□ -1.23
TMEM39A-210ENST00000490099 ZNF585BQ52M93 769 aa7.34□□□□□ -1.23
TMEM39A-210ENST00000490099 C19orf35Q6ZS72 473 aa7.34□□□□□ -1.23
TMEM39A-210ENST00000490099 SGPP2Q8IWX5 399 aa7.34□□□□□ -1.23
TMEM39A-210ENST00000490099 MUC7Q8TAX7 377 aa7.34□□□□□ -1.23
TMEM39A-210ENST00000490099 FAM212BQ9NTI7 297 aaPredicted RBP7.34□□□□□ -1.23
TMEM39A-210ENST00000490099 TENM2Q9NT68 2774 aa7.33□□□□□ -1.24
TMEM39A-210ENST00000490099 TRBV7-1A0A0A6YYK4 115 aa7.33□□□□□ -1.24
TMEM39A-210ENST00000490099 CENPXA8MT69 81 aa7.33□□□□□ -1.24
TMEM39A-210ENST00000490099 A8MWP6 167 aa7.33□□□□□ -1.24
TMEM39A-210ENST00000490099 PPP5D1E7EU14 171 aa7.33□□□□□ -1.24
TMEM39A-210ENST00000490099 DHFRP00374 187 aa7.33□□□□□ -1.24
TMEM39A-210ENST00000490099 FCER2P06734 321 aa7.33□□□□□ -1.24
TMEM39A-210ENST00000490099 IL7P13232 177 aa7.33□□□□□ -1.24
TMEM39A-210ENST00000490099 FOLR2P14207 255 aa7.33□□□□□ -1.24
TMEM39A-210ENST00000490099 TBPP20226 339 aa7.33□□□□□ -1.24
TMEM39A-210ENST00000490099 CBLN1P23435 193 aa7.33□□□□□ -1.24
TMEM39A-210ENST00000490099 F2RP25116 425 aa7.33□□□□□ -1.24
TMEM39A-210ENST00000490099 FAUP35544 74 aaKnown RBP7.33□□□□□ -1.24
TMEM39A-210ENST00000490099 TAS2R46P59540 309 aa7.33□□□□□ -1.24
TMEM39A-210ENST00000490099 DEFA1P59665 94 aa7.33□□□□□ -1.24
TMEM39A-210ENST00000490099 DEFA3P59666 94 aa7.33□□□□□ -1.24
TMEM39A-210ENST00000490099 HAGHQ16775 308 aa7.33□□□□□ -1.24
TMEM39A-210ENST00000490099 CASC10Q5T4H9 136 aa7.33□□□□□ -1.24
TMEM39A-210ENST00000490099 THOC7Q6I9Y2 204 aaKnown RBP7.33□□□□□ -1.24
TMEM39A-210ENST00000490099 SSX9Q7RTT3 188 aa7.33□□□□□ -1.24
TMEM39A-210ENST00000490099 TOMM5Q8N4H5 51 aa7.33□□□□□ -1.24
TMEM39A-210ENST00000490099 OR52I2Q8NH67 350 aa7.33□□□□□ -1.24
TMEM39A-210ENST00000490099 ZNF502Q8TBZ5 544 aa7.33□□□□□ -1.24
TMEM39A-210ENST00000490099 ZMAT4Q9H898 229 aa7.33□□□□□ -1.24
TMEM39A-210ENST00000490099 TMEM140Q9NV12 185 aa7.33□□□□□ -1.24
TMEM39A-210ENST00000490099 TECRQ9NZ01 308 aaKnown RBP7.33□□□□□ -1.24
TMEM39A-210ENST00000490099 EHFQ9NZC4 300 aa7.33□□□□□ -1.24
TMEM39A-210ENST00000490099 MTFP1Q9UDX5 166 aa7.33□□□□□ -1.24
TMEM39A-210ENST00000490099 TEX50A0A1B0GTY4 177 aa7.32□□□□□ -1.24
TMEM39A-210ENST00000490099 TMEM213A2RRL7 107 aa7.32□□□□□ -1.24
TMEM39A-210ENST00000490099 MEIS3P1A6NDR6 274 aa7.32□□□□□ -1.24
TMEM39A-210ENST00000490099 S1PR2O95136 353 aa7.32□□□□□ -1.24
TMEM39A-210ENST00000490099 HLA-AP01891 365 aaKnown RBP7.32□□□□□ -1.24
TMEM39A-210ENST00000490099 CLEC3BP05452 202 aa7.32□□□□□ -1.24
TMEM39A-210ENST00000490099 UCP3P55916 312 aa7.32□□□□□ -1.24
TMEM39A-210ENST00000490099 TAS2R19P59542 299 aa7.32□□□□□ -1.24
TMEM39A-210ENST00000490099 FXYD4P59646 89 aa7.32□□□□□ -1.24
TMEM39A-210ENST00000490099 HERV-K104P61576 105 aa7.32□□□□□ -1.24
TMEM39A-210ENST00000490099 WT1-ASQ06250 92 aa7.32□□□□□ -1.24
TMEM39A-210ENST00000490099 RNASE12Q5GAN4 147 aaKnown RBP7.32□□□□□ -1.24
TMEM39A-210ENST00000490099 ZNF57Q68EA5 555 aaPredicted RBP7.32□□□□□ -1.24
TMEM39A-210ENST00000490099 CLEC19AQ6UXS0 136 aa7.32□□□□□ -1.24
TMEM39A-210ENST00000490099 HSD17B13Q7Z5P4 300 aaPredicted RBP7.32□□□□□ -1.24
TMEM39A-210ENST00000490099 OR6F1Q8NGZ6 308 aa7.32□□□□□ -1.24
TMEM39A-210ENST00000490099 OR51H1Q8NH63 302 aa7.32□□□□□ -1.24
TMEM39A-210ENST00000490099 VN1R17PQ8TDU5 208 aa7.32□□□□□ -1.24
TMEM39A-210ENST00000490099 TRIM63Q969Q1 353 aa7.32□□□□□ -1.24
TMEM39A-210ENST00000490099 EEF1AKMT3Q96AZ1 226 aa7.32□□□□□ -1.24
TMEM39A-210ENST00000490099 CXorf58Q96LI9 332 aa7.32□□□□□ -1.24
TMEM39A-210ENST00000490099 ATP6V0BQ99437 205 aa7.32□□□□□ -1.24
TMEM39A-210ENST00000490099 C7orf50Q9BRJ6 194 aaKnown RBP7.32□□□□□ -1.24
TMEM39A-210ENST00000490099 ZNF2Q9BSG1 426 aaPredicted RBP7.32□□□□□ -1.24
TMEM39A-210ENST00000490099 QTRT1Q9BXR0 403 aaKnown RBP7.32□□□□□ -1.24
TMEM39A-210ENST00000490099 HRASLSQ9HDD0 168 aa7.32□□□□□ -1.24
TMEM39A-210ENST00000490099 NDUFA4L2Q9NRX3 87 aa7.32□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 64.7 ms