RNA–Protein interactions for RNA: ENST00000489053.1

HDAC6-232, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 539 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-232ENST00000489053 CRYGCP07315 174 aa6.98□□□□□ -1.29
HDAC6-232ENST00000489053 FGF2P09038 288 aa6.98□□□□□ -1.29
HDAC6-232ENST00000489053 MYOD1P15172 320 aa6.98□□□□□ -1.29
HDAC6-232ENST00000489053 CTRB1P17538 263 aa6.98□□□□□ -1.29
HDAC6-232ENST00000489053 RPL5P46777 297 aaKnown RBP6.98□□□□□ -1.29
HDAC6-232ENST00000489053 AKR1C2P52895 323 aa6.98□□□□□ -1.29
HDAC6-232ENST00000489053 PPP5CP53041 499 aa6.98□□□□□ -1.29
HDAC6-232ENST00000489053 TMBIM6P55061 237 aa6.98□□□□□ -1.29
HDAC6-232ENST00000489053 BRWD1-AS2P59051 145 aa6.98□□□□□ -1.29
HDAC6-232ENST00000489053 MEF2DQ14814 521 aa6.98□□□□□ -1.29
HDAC6-232ENST00000489053 GUCA2BQ16661 112 aa6.98□□□□□ -1.29
HDAC6-232ENST00000489053 CTRB2Q6GPI1 263 aa6.98□□□□□ -1.29
HDAC6-232ENST00000489053 PLET1Q6UQ28 207 aa6.98□□□□□ -1.29
HDAC6-232ENST00000489053 C19orf35Q6ZS72 473 aa6.98□□□□□ -1.29
HDAC6-232ENST00000489053 GDPD1Q8N9F7 314 aa6.98□□□□□ -1.29
HDAC6-232ENST00000489053 OR1L6Q8NGR2 347 aa6.98□□□□□ -1.29
HDAC6-232ENST00000489053 OR2K2Q8NGT1 345 aa6.98□□□□□ -1.29
HDAC6-232ENST00000489053 OR5B3Q8NH48 314 aa6.98□□□□□ -1.29
HDAC6-232ENST00000489053 ZNF486Q96H40 463 aaPredicted RBP6.98□□□□□ -1.29
HDAC6-232ENST00000489053 DIRAS2Q96HU8 199 aa6.98□□□□□ -1.29
HDAC6-232ENST00000489053 BCL7BQ9BQE9 202 aa6.98□□□□□ -1.29
HDAC6-232ENST00000489053 PALMDQ9NP74 551 aa6.98□□□□□ -1.29
HDAC6-232ENST00000489053 ENY2Q9NPA8 101 aa6.98□□□□□ -1.29
HDAC6-232ENST00000489053 SLC2A8Q9NY64 477 aa6.98□□□□□ -1.29
HDAC6-232ENST00000489053 C14orf166Q9Y224 244 aaKnown RBP6.98□□□□□ -1.29
HDAC6-232ENST00000489053 S4R3C0 116 aa6.98□□□□□ -1.29
HDAC6-232ENST00000489053 TEX50A0A1B0GTY4 177 aa6.97□□□□□ -1.29
HDAC6-232ENST00000489053 GABARAPH6UMI1 98 aa6.97□□□□□ -1.29
HDAC6-232ENST00000489053 HLA-AP01891 365 aaKnown RBP6.97□□□□□ -1.29
HDAC6-232ENST00000489053 CD3DP04234 171 aa6.97□□□□□ -1.29
HDAC6-232ENST00000489053 CLEC3BP05452 202 aa6.97□□□□□ -1.29
HDAC6-232ENST00000489053 FRMD6-AS1P0C7T7 363 aa6.97□□□□□ -1.29
HDAC6-232ENST00000489053 GPR183P32249 361 aa6.97□□□□□ -1.29
HDAC6-232ENST00000489053 ALDH3B2P48448 385 aa6.97□□□□□ -1.29
HDAC6-232ENST00000489053 UCP3P55916 312 aa6.97□□□□□ -1.29
HDAC6-232ENST00000489053 PIGPP57054 158 aa6.97□□□□□ -1.29
HDAC6-232ENST00000489053 SSBP1Q04837 148 aaKnown RBP6.97□□□□□ -1.29
HDAC6-232ENST00000489053 SPCS2Q15005 226 aa6.97□□□□□ -1.29
HDAC6-232ENST00000489053 Q56UQ5 140 aa6.97□□□□□ -1.29
HDAC6-232ENST00000489053 STEAP1BQ6NZ63 245 aa6.97□□□□□ -1.29
HDAC6-232ENST00000489053 LAX1Q8IWV1 398 aa6.97□□□□□ -1.29
HDAC6-232ENST00000489053 UBAC2Q8NBM4 344 aa6.97□□□□□ -1.29
HDAC6-232ENST00000489053 OR10W1Q8NGF6 305 aa6.97□□□□□ -1.29
HDAC6-232ENST00000489053 RRNAD1Q96FB5 475 aaKnown RBP6.97□□□□□ -1.29
HDAC6-232ENST00000489053 WWC2-AS2Q96NR7 200 aa6.97□□□□□ -1.29
HDAC6-232ENST00000489053 PLEKHA3Q9HB20 300 aa6.97□□□□□ -1.29
HDAC6-232ENST00000489053 ZC4H2Q9NQZ6 224 aa6.97□□□□□ -1.29
HDAC6-232ENST00000489053 FAM212BQ9NTI7 297 aaPredicted RBP6.97□□□□□ -1.29
HDAC6-232ENST00000489053 TECRQ9NZ01 308 aaKnown RBP6.97□□□□□ -1.29
HDAC6-232ENST00000489053 CCDC59Q9P031 241 aaKnown RBP6.97□□□□□ -1.29
HDAC6-232ENST00000489053 KLK11Q9UBX7 282 aa6.97□□□□□ -1.29
HDAC6-232ENST00000489053 MTFP1Q9UDX5 166 aa6.97□□□□□ -1.29
HDAC6-232ENST00000489053 NSG2Q9Y328 171 aa6.97□□□□□ -1.29
HDAC6-232ENST00000489053 DNAH9Q9NYC9 4486 aa6.97□□□□□ -1.29
HDAC6-232ENST00000489053 NBEAL2Q6ZNJ1 2754 aa6.97□□□□□ -1.29
HDAC6-232ENST00000489053 IGLV11-55A0A075B6I3 123 aa6.96□□□□□ -1.3
HDAC6-232ENST00000489053 TEX13DA0A0J9YY54 714 aaPredicted RBP6.96□□□□□ -1.3
HDAC6-232ENST00000489053 IGLC7A0M8Q6 106 aa6.96□□□□□ -1.3
HDAC6-232ENST00000489053 C15orf61A6NNL5 157 aa6.96□□□□□ -1.3
HDAC6-232ENST00000489053 E7EUB6 86 aa6.96□□□□□ -1.3
HDAC6-232ENST00000489053 IFNA17P01571 189 aa6.96□□□□□ -1.3
HDAC6-232ENST00000489053 CSN3P07498 182 aa6.96□□□□□ -1.3
HDAC6-232ENST00000489053 FOLR2P14207 255 aa6.96□□□□□ -1.3
HDAC6-232ENST00000489053 PI3P19957 117 aa6.96□□□□□ -1.3
HDAC6-232ENST00000489053 PTBP1P26599 531 aaKnown RBP eCLIP6.96□□□□□ -1.3
HDAC6-232ENST00000489053 SNCAP37840 140 aa6.96□□□□□ -1.3
HDAC6-232ENST00000489053 CD81P60033 236 aa6.96□□□□□ -1.3
HDAC6-232ENST00000489053 ERHP84090 104 aaKnown RBP6.96□□□□□ -1.3
HDAC6-232ENST00000489053 SLC16A13Q7RTY0 426 aa6.96□□□□□ -1.3
HDAC6-232ENST00000489053 GPHB5Q86YW7 130 aa6.96□□□□□ -1.3
HDAC6-232ENST00000489053 SLC35G3Q8N808 338 aa6.96□□□□□ -1.3
HDAC6-232ENST00000489053 TMEM229BQ8NBD8 167 aa6.96□□□□□ -1.3
HDAC6-232ENST00000489053 TERB2Q8NHR7 220 aa6.96□□□□□ -1.3
HDAC6-232ENST00000489053 VN1R17PQ8TDU5 208 aa6.96□□□□□ -1.3
HDAC6-232ENST00000489053 MRGPRFQ96AM1 343 aa6.96□□□□□ -1.3
HDAC6-232ENST00000489053 FANCD2OSQ96PS1 177 aa6.96□□□□□ -1.3
HDAC6-232ENST00000489053 GAR1Q9NY12 217 aaKnown RBP6.96□□□□□ -1.3
HDAC6-232ENST00000489053 SIGLEC8Q9NYZ4 499 aa6.96□□□□□ -1.3
HDAC6-232ENST00000489053 RSL24D1Q9UHA3 163 aaKnown RBP6.96□□□□□ -1.3
HDAC6-232ENST00000489053 UFC1Q9Y3C8 167 aa6.96□□□□□ -1.3
HDAC6-232ENST00000489053 SORL1Q92673 2214 aa6.96□□□□□ -1.3
HDAC6-232ENST00000489053 C3orf85A0A1B0GTC6 90 aa6.95□□□□□ -1.3
HDAC6-232ENST00000489053 A0A1B0GW64 132 aa6.95□□□□□ -1.3
HDAC6-232ENST00000489053 MFSD2BA6NFX1 497 aa6.95□□□□□ -1.3
HDAC6-232ENST00000489053 OR2T8A6NH00 312 aa6.95□□□□□ -1.3
HDAC6-232ENST00000489053 C2orf70A6NJV1 201 aa6.95□□□□□ -1.3
HDAC6-232ENST00000489053 CTDSP2O14595 271 aa6.95□□□□□ -1.3
HDAC6-232ENST00000489053 SCGB2A1O75556 95 aa6.95□□□□□ -1.3
HDAC6-232ENST00000489053 B3GALNT1O75752 331 aa6.95□□□□□ -1.3
HDAC6-232ENST00000489053 AKAIN1P0CW23 69 aa6.95□□□□□ -1.3
HDAC6-232ENST00000489053 IGHV4-30-4P0DP06 118 aa6.95□□□□□ -1.3
HDAC6-232ENST00000489053 HOXA1P49639 335 aaPredicted RBP6.95□□□□□ -1.3
HDAC6-232ENST00000489053 ANKRD55Q3KP44 614 aa6.95□□□□□ -1.3
HDAC6-232ENST00000489053 CD300EQ496F6 205 aaPredicted RBP6.95□□□□□ -1.3
HDAC6-232ENST00000489053 ZNF57Q68EA5 555 aaPredicted RBP6.95□□□□□ -1.3
HDAC6-232ENST00000489053 RBPMS2Q6ZRY4 209 aaKnown RBP6.95□□□□□ -1.3
HDAC6-232ENST00000489053 MCFD2Q8NI22 146 aa6.95□□□□□ -1.3
HDAC6-232ENST00000489053 SMIM4Q8WVI0 70 aa6.95□□□□□ -1.3
HDAC6-232ENST00000489053 MARC2Q969Z3 335 aa6.95□□□□□ -1.3
HDAC6-232ENST00000489053 MISP3Q96FF7 219 aa6.95□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 97.7 ms