RNA–Protein interactions for RNA: ENST00000488908.1

CCDC93-209, Transcript of coiled-coil domain containing 93, humanhuman

TSL 5

Gene CCDC93, Length 268 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC93-209ENST00000488908 RASL12Q9NYN1 266 aa-0.14□□□□□ -2.43
CCDC93-209ENST00000488908 IGSF10Q6WRI0 2623 aa-0.15□□□□□ -2.43
CCDC93-209ENST00000488908 IGHV1-69-2A0A0G2JMI3 117 aa-0.15□□□□□ -2.43
CCDC93-209ENST00000488908 GGT3PA6NGU5 568 aa-0.15□□□□□ -2.43
CCDC93-209ENST00000488908 I3L521 148 aa-0.15□□□□□ -2.43
CCDC93-209ENST00000488908 AZIN1O14977 448 aa-0.15□□□□□ -2.43
CCDC93-209ENST00000488908 IL6P05231 212 aa-0.15□□□□□ -2.43
CCDC93-209ENST00000488908 IVLP07476 585 aa-0.15□□□□□ -2.43
CCDC93-209ENST00000488908 KRT7P08729 469 aa-0.15□□□□□ -2.43
CCDC93-209ENST00000488908 ASAH2BP0C7U1 165 aa-0.15□□□□□ -2.43
CCDC93-209ENST00000488908 CXCL3P19876 107 aa-0.15□□□□□ -2.43
CCDC93-209ENST00000488908 SYT1P21579 422 aa-0.15□□□□□ -2.43
CCDC93-209ENST00000488908 MPV17LQ2QL34 196 aa-0.15□□□□□ -2.43
CCDC93-209ENST00000488908 HLA-DRB5Q30154 266 aa-0.15□□□□□ -2.43
CCDC93-209ENST00000488908 IBA57Q5T440 356 aaKnown RBP-0.15□□□□□ -2.43
CCDC93-209ENST00000488908 SBSNQ6UWP8 590 aa-0.15□□□□□ -2.43
CCDC93-209ENST00000488908 LCN15Q6UWW0 184 aa-0.15□□□□□ -2.43
CCDC93-209ENST00000488908 LCA10Q71F78 164 aa-0.15□□□□□ -2.43
CCDC93-209ENST00000488908 GKN2Q86XP6 184 aa-0.15□□□□□ -2.43
CCDC93-209ENST00000488908 UBL4BQ8N7F7 174 aa-0.15□□□□□ -2.43
CCDC93-209ENST00000488908 OR11H6Q8NGC7 330 aa-0.15□□□□□ -2.43
CCDC93-209ENST00000488908 OR5L1Q8NGL2 311 aa-0.15□□□□□ -2.43
CCDC93-209ENST00000488908 OR2T27Q8NH04 317 aa-0.15□□□□□ -2.43
CCDC93-209ENST00000488908 HAVCR2Q8TDQ0 301 aa-0.15□□□□□ -2.43
CCDC93-209ENST00000488908 C4orf3Q8WVX3 66 aa-0.15□□□□□ -2.43
CCDC93-209ENST00000488908 ROPN1LQ96C74 230 aa-0.15□□□□□ -2.43
CCDC93-209ENST00000488908 PACRGQ96M98 296 aaPredicted RBP-0.15□□□□□ -2.43
CCDC93-209ENST00000488908 SLC50A1Q9BRV3 221 aa-0.15□□□□□ -2.43
CCDC93-209ENST00000488908 BBS2Q9BXC9 721 aa-0.15□□□□□ -2.43
CCDC93-209ENST00000488908 SLC22A4Q9H015 551 aa-0.15□□□□□ -2.43
CCDC93-209ENST00000488908 ASH1LQ9NR48 2969 aaKnown RBP-0.15□□□□□ -2.43
CCDC93-209ENST00000488908 C1orf109Q9NX04 203 aa-0.15□□□□□ -2.43
CCDC93-209ENST00000488908 POFUT2Q9Y2G5 429 aa-0.15□□□□□ -2.43
CCDC93-209ENST00000488908 RIMS2Q9UQ26 1411 aa-0.15□□□□□ -2.43
CCDC93-209ENST00000488908 MUC12Q9UKN1 5478 aa-0.16□□□□□ -2.43
CCDC93-209ENST00000488908 C2orf70A6NJV1 201 aa-0.16□□□□□ -2.44
CCDC93-209ENST00000488908 FABP5P3A8MUU1 101 aa-0.16□□□□□ -2.44
CCDC93-209ENST00000488908 GOLGA8MH3BSY2 632 aa-0.16□□□□□ -2.44
CCDC93-209ENST00000488908 CLPSP04118 112 aa-0.16□□□□□ -2.44
CCDC93-209ENST00000488908 HTR1AP08908 422 aa-0.16□□□□□ -2.44
CCDC93-209ENST00000488908 SRP19P09132 144 aaKnown RBP-0.16□□□□□ -2.44
CCDC93-209ENST00000488908 RPS4Y1P22090 263 aaKnown RBP-0.16□□□□□ -2.44
CCDC93-209ENST00000488908 KDELR2P33947 212 aa-0.16□□□□□ -2.44
CCDC93-209ENST00000488908 EFNA4P52798 201 aa-0.16□□□□□ -2.44
CCDC93-209ENST00000488908 SUPT4H1P63272 117 aaKnown RBP-0.16□□□□□ -2.44
CCDC93-209ENST00000488908 SLAMF1Q13291 335 aa-0.16□□□□□ -2.44
CCDC93-209ENST00000488908 C4orf26Q17RF5 130 aa-0.16□□□□□ -2.44
CCDC93-209ENST00000488908 TNFAIP8L3Q5GJ75 292 aa-0.16□□□□□ -2.44
CCDC93-209ENST00000488908 SAPCD1Q5SSQ6 148 aa-0.16□□□□□ -2.44
CCDC93-209ENST00000488908 FAM78BQ5VT40 261 aa-0.16□□□□□ -2.44
CCDC93-209ENST00000488908 SYPL2Q5VXT5 272 aa-0.16□□□□□ -2.44
CCDC93-209ENST00000488908 FAM19A5Q7Z5A7 132 aaPredicted RBP-0.16□□□□□ -2.44
CCDC93-209ENST00000488908 EXOC3-AS1Q8N2X6 119 aa-0.16□□□□□ -2.44
CCDC93-209ENST00000488908 SPERTQ8NA61 448 aa-0.16□□□□□ -2.44
CCDC93-209ENST00000488908 GPR32P1Q8NGA4 272 aa-0.16□□□□□ -2.44
CCDC93-209ENST00000488908 OR5B17Q8NGF7 314 aa-0.16□□□□□ -2.44
CCDC93-209ENST00000488908 SLC37A2Q8TED4 501 aa-0.16□□□□□ -2.44
CCDC93-209ENST00000488908 PRRT1Q99946 306 aa-0.16□□□□□ -2.44
CCDC93-209ENST00000488908 NABP2Q9BQ15 211 aa-0.16□□□□□ -2.44
CCDC93-209ENST00000488908 SPANXB1Q9NS25 103 aaPredicted RBP-0.16□□□□□ -2.44
CCDC93-209ENST00000488908 FKBP14Q9NWM8 211 aa-0.16□□□□□ -2.44
CCDC93-209ENST00000488908 EURLQ9NYK6 297 aa-0.16□□□□□ -2.44
CCDC93-209ENST00000488908 TAS2R4Q9NYW5 299 aa-0.16□□□□□ -2.44
CCDC93-209ENST00000488908 CKLFQ9UBR5 152 aa-0.16□□□□□ -2.44
CCDC93-209ENST00000488908 FUT9Q9Y231 359 aa-0.16□□□□□ -2.44
CCDC93-209ENST00000488908 TP53TG1Q9Y2A0 90 aa-0.16□□□□□ -2.44
CCDC93-209ENST00000488908 ZNF106Q9H2Y7 1883 aaKnown RBP-0.16□□□□□ -2.44
CCDC93-209ENST00000488908 ASCC3Q8N3C0 2202 aaKnown RBP-0.17□□□□□ -2.44
CCDC93-209ENST00000488908 E9PCH4 1651 aa-0.17□□□□□ -2.44
CCDC93-209ENST00000488908 MCM3APO60318 1980 aa-0.17□□□□□ -2.44
CCDC93-209ENST00000488908 TRBV6-8A0A0A6YYG3 113 aa-0.17□□□□□ -2.44
CCDC93-209ENST00000488908 A0A0D9SG42 100 aa-0.17□□□□□ -2.44
CCDC93-209ENST00000488908 C1orf232A0A0U1RR37 186 aa-0.17□□□□□ -2.44
CCDC93-209ENST00000488908 DISC1C4P0D8 188 aa-0.17□□□□□ -2.44
CCDC93-209ENST00000488908 ATP6V1G2O95670 118 aa-0.17□□□□□ -2.44
CCDC93-209ENST00000488908 BAALC-AS2P0C853 105 aa-0.17□□□□□ -2.44
CCDC93-209ENST00000488908 MIFP14174 115 aa-0.17□□□□□ -2.44
CCDC93-209ENST00000488908 KCNE1P15382 129 aa-0.17□□□□□ -2.44
CCDC93-209ENST00000488908 ZNF25P17030 456 aaPredicted RBP-0.17□□□□□ -2.44
CCDC93-209ENST00000488908 LCN1P31025 176 aa-0.17□□□□□ -2.44
CCDC93-209ENST00000488908 HOXA6P31267 233 aa-0.17□□□□□ -2.44
CCDC93-209ENST00000488908 CNBPP62633 177 aaKnown RBP-0.17□□□□□ -2.44
CCDC93-209ENST00000488908 RHOGP84095 191 aa-0.17□□□□□ -2.44
CCDC93-209ENST00000488908 PSG9Q00887 426 aa-0.17□□□□□ -2.44
CCDC93-209ENST00000488908 CAV1Q03135 178 aa-0.17□□□□□ -2.44
CCDC93-209ENST00000488908 FABP9Q0Z7S8 132 aa-0.17□□□□□ -2.44
CCDC93-209ENST00000488908 ZNHIT3Q15649 155 aaPredicted RBP-0.17□□□□□ -2.44
CCDC93-209ENST00000488908 SPINK6Q6UWN8 80 aa-0.17□□□□□ -2.44
CCDC93-209ENST00000488908 SOSTDC1Q6X4U4 206 aa-0.17□□□□□ -2.44
CCDC93-209ENST00000488908 HIST2H3AQ71DI3 136 aa-0.17□□□□□ -2.44
CCDC93-209ENST00000488908 COPS6Q7L5N1 327 aa-0.17□□□□□ -2.44
CCDC93-209ENST00000488908 SFT2D1Q8WV19 159 aa-0.17□□□□□ -2.44
CCDC93-209ENST00000488908 RASSF5Q8WWW0 418 aa-0.17□□□□□ -2.44
CCDC93-209ENST00000488908 ITFG2Q969R8 447 aa-0.17□□□□□ -2.44
CCDC93-209ENST00000488908 MIXL1Q9H2W2 232 aa-0.17□□□□□ -2.44
CCDC93-209ENST00000488908 CXorf21Q9HAI6 301 aa-0.17□□□□□ -2.44
CCDC93-209ENST00000488908 SPACA1Q9HBV2 294 aa-0.17□□□□□ -2.44
CCDC93-209ENST00000488908 CEP192Q8TEP8 1941 aa-0.17□□□□□ -2.44
CCDC93-209ENST00000488908 COL1A1P02452 1464 aaPredicted RBP-0.17□□□□□ -2.44
CCDC93-209ENST00000488908 MTUS2Q5JR59 1369 aa-0.18□□□□□ -2.44
Retrieved 100 of 20,778 RNA–protein pairs in 59.5 ms