RNA–Protein interactions for RNA: ENST00000474020.5

ATPAF1-204, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

TSL 2

Gene ATPAF1, Length 535 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-204ENST00000474020 ARG1P05089 322 aa4.82□□□□□ -1.64
ATPAF1-204ENST00000474020 OR9G9P0C7N8 305 aa4.82□□□□□ -1.64
ATPAF1-204ENST00000474020 SMIM6P0DI80 62 aa4.82□□□□□ -1.64
ATPAF1-204ENST00000474020 SAA2P0DJI9 122 aaPredicted RBP4.82□□□□□ -1.64
ATPAF1-204ENST00000474020 AGAP20933 346 aa4.82□□□□□ -1.64
ATPAF1-204ENST00000474020 NPY1RP25929 384 aa4.82□□□□□ -1.64
ATPAF1-204ENST00000474020 GNG10P50151 68 aa4.82□□□□□ -1.64
ATPAF1-204ENST00000474020 SUB1P53999 127 aaKnown RBP eCLIP4.82□□□□□ -1.64
ATPAF1-204ENST00000474020 TMPRSS3P57727 454 aa4.82□□□□□ -1.64
ATPAF1-204ENST00000474020 LOXL3P58215 753 aa4.82□□□□□ -1.64
ATPAF1-204ENST00000474020 HSPE1P61604 102 aaKnown RBP4.82□□□□□ -1.64
ATPAF1-204ENST00000474020 RHOBP62745 196 aa4.82□□□□□ -1.64
ATPAF1-204ENST00000474020 RPL31P62899 125 aaKnown RBP4.82□□□□□ -1.64
ATPAF1-204ENST00000474020 RPL19P84098 196 aaKnown RBP4.82□□□□□ -1.64
ATPAF1-204ENST00000474020 KIAA0141Q14154 515 aaPredicted RBP4.82□□□□□ -1.64
ATPAF1-204ENST00000474020 C17orf58Q2M2W7 97 aa4.82□□□□□ -1.64
ATPAF1-204ENST00000474020 RPL39P5Q59GN2 51 aa4.82□□□□□ -1.64
ATPAF1-204ENST00000474020 ADAM5Q6NVV9 412 aa4.82□□□□□ -1.64
ATPAF1-204ENST00000474020 FAM71F2Q6NXP2 309 aa4.82□□□□□ -1.64
ATPAF1-204ENST00000474020 KCNIP4Q6PIL6 250 aa4.82□□□□□ -1.64
ATPAF1-204ENST00000474020 Q6YL49 198 aa4.82□□□□□ -1.64
ATPAF1-204ENST00000474020 ZNF788Q6ZQV5 615 aa4.82□□□□□ -1.64
ATPAF1-204ENST00000474020 CYP2G1PQ6ZSU1 146 aa4.82□□□□□ -1.64
ATPAF1-204ENST00000474020 ZFP82Q8N141 532 aa4.82□□□□□ -1.64
ATPAF1-204ENST00000474020 OR13D1Q8NGV5 346 aa4.82□□□□□ -1.64
ATPAF1-204ENST00000474020 OR10X1Q8NGY0 326 aa4.82□□□□□ -1.64
ATPAF1-204ENST00000474020 OR5B3Q8NH48 314 aa4.82□□□□□ -1.64
ATPAF1-204ENST00000474020 OR4A5Q8NH83 315 aa4.82□□□□□ -1.64
ATPAF1-204ENST00000474020 OSR1Q8TAX0 266 aaPredicted RBP4.82□□□□□ -1.64
ATPAF1-204ENST00000474020 C2CD4CQ8TF44 421 aa4.82□□□□□ -1.64
ATPAF1-204ENST00000474020 H1FXQ92522 213 aaKnown RBP4.82□□□□□ -1.64
ATPAF1-204ENST00000474020 RAB1CQ92928 201 aa4.82□□□□□ -1.64
ATPAF1-204ENST00000474020 C5orf30Q96GV9 206 aa4.82□□□□□ -1.64
ATPAF1-204ENST00000474020 ZNF714Q96N38 554 aa4.82□□□□□ -1.64
ATPAF1-204ENST00000474020 UHRF2Q96PU4 802 aa4.82□□□□□ -1.64
ATPAF1-204ENST00000474020 TMEM204Q9BSN7 226 aa4.82□□□□□ -1.64
ATPAF1-204ENST00000474020 DCTN5Q9BTE1 182 aa4.82□□□□□ -1.64
ATPAF1-204ENST00000474020 HINT2Q9BX68 163 aa4.82□□□□□ -1.64
ATPAF1-204ENST00000474020 LINC00574Q9H8X3 128 aa4.82□□□□□ -1.64
ATPAF1-204ENST00000474020 SLC35D1Q9NTN3 355 aa4.82□□□□□ -1.64
ATPAF1-204ENST00000474020 SH3BGRL2Q9UJC5 107 aa4.82□□□□□ -1.64
ATPAF1-204ENST00000474020 RPUSD1Q9UJJ7 312 aaKnown RBP4.82□□□□□ -1.64
ATPAF1-204ENST00000474020 TCF19Q9Y242 345 aa4.82□□□□□ -1.64
ATPAF1-204ENST00000474020 ZNF257Q9Y2Q1 563 aa4.82□□□□□ -1.64
ATPAF1-204ENST00000474020 OR51B2Q9Y5P1 312 aa4.82□□□□□ -1.64
ATPAF1-204ENST00000474020 KLF2Q9Y5W3 355 aaPredicted RBP4.82□□□□□ -1.64
ATPAF1-204ENST00000474020 DOCK7Q96N67 2140 aa4.82□□□□□ -1.64
ATPAF1-204ENST00000474020 USP9XQ93008 2570 aaPredicted RBP4.81□□□□□ -1.64
ATPAF1-204ENST00000474020 A0A1W2PN81 502 aa4.81□□□□□ -1.64
ATPAF1-204ENST00000474020 hCG_1809904A0A1W2PP81 198 aa4.81□□□□□ -1.64
ATPAF1-204ENST00000474020 A0A1W2PR64 198 aa4.81□□□□□ -1.64
ATPAF1-204ENST00000474020 A0A1W2PRV1 198 aa4.81□□□□□ -1.64
ATPAF1-204ENST00000474020 C15orf62A8K5M9 175 aa4.81□□□□□ -1.64
ATPAF1-204ENST00000474020 SEC14L6B5MCN3 397 aa4.81□□□□□ -1.64
ATPAF1-204ENST00000474020 H7BYZ3 331 aa4.81□□□□□ -1.64
ATPAF1-204ENST00000474020 AP4M1O00189 453 aa4.81□□□□□ -1.64
ATPAF1-204ENST00000474020 WISP2O76076 250 aa4.81□□□□□ -1.64
ATPAF1-204ENST00000474020 VENTXO95231 258 aa4.81□□□□□ -1.64
ATPAF1-204ENST00000474020 S100A2P29034 98 aa4.81□□□□□ -1.64
ATPAF1-204ENST00000474020 MAS1LP35410 378 aa4.81□□□□□ -1.64
ATPAF1-204ENST00000474020 CHRNA7P36544 502 aa4.81□□□□□ -1.64
ATPAF1-204ENST00000474020 TDGF1P3P51864 188 aa4.81□□□□□ -1.64
ATPAF1-204ENST00000474020 TAS2R45P59539 299 aa4.81□□□□□ -1.64
ATPAF1-204ENST00000474020 CCL8P80075 99 aa4.81□□□□□ -1.64
ATPAF1-204ENST00000474020 S100A12P80511 92 aa4.81□□□□□ -1.64
ATPAF1-204ENST00000474020 ERHP84090 104 aaKnown RBP4.81□□□□□ -1.64
ATPAF1-204ENST00000474020 BSPH1Q075Z2 132 aa4.81□□□□□ -1.64
ATPAF1-204ENST00000474020 TFF3Q07654 80 aa4.81□□□□□ -1.64
ATPAF1-204ENST00000474020 ADIRFQ15847 76 aa4.81□□□□□ -1.64
ATPAF1-204ENST00000474020 ADIPOQQ15848 244 aa4.81□□□□□ -1.64
ATPAF1-204ENST00000474020 POU2AF1Q16633 256 aa4.81□□□□□ -1.64
ATPAF1-204ENST00000474020 TMEM249Q2WGJ8 235 aa4.81□□□□□ -1.64
ATPAF1-204ENST00000474020 BSXQ3C1V8 233 aa4.81□□□□□ -1.64
ATPAF1-204ENST00000474020 VMA21Q3ZAQ7 101 aa4.81□□□□□ -1.64
ATPAF1-204ENST00000474020 SPINK9Q5DT21 86 aa4.81□□□□□ -1.64
ATPAF1-204ENST00000474020 CT45A1Q5HYN5 189 aa4.81□□□□□ -1.64
ATPAF1-204ENST00000474020 CST9LP1Q5W188 147 aa4.81□□□□□ -1.64
ATPAF1-204ENST00000474020 OR4A47Q6IF82 309 aa4.81□□□□□ -1.64
ATPAF1-204ENST00000474020 ACSM6Q6P461 480 aa4.81□□□□□ -1.64
ATPAF1-204ENST00000474020 SLC25A48Q6ZT89 311 aaKnown RBP4.81□□□□□ -1.64
ATPAF1-204ENST00000474020 LURAP1LQ8IV03 231 aa4.81□□□□□ -1.64
ATPAF1-204ENST00000474020 LINC00518Q8N0U6 118 aa4.81□□□□□ -1.64
ATPAF1-204ENST00000474020 RPRMLQ8N4K4 120 aa4.81□□□□□ -1.64
ATPAF1-204ENST00000474020 FAM216BQ8N7L0 139 aa4.81□□□□□ -1.64
ATPAF1-204ENST00000474020 C8orf31Q8N9H6 132 aa4.81□□□□□ -1.64
ATPAF1-204ENST00000474020 BEND2Q8NDZ0 799 aa4.81□□□□□ -1.64
ATPAF1-204ENST00000474020 CT45A3Q8NHU0 189 aa4.81□□□□□ -1.64
ATPAF1-204ENST00000474020 CA5BP1Q8WTZ4 195 aa4.81□□□□□ -1.64
ATPAF1-204ENST00000474020 C22orf15Q8WYQ4 148 aa4.81□□□□□ -1.64
ATPAF1-204ENST00000474020 RAB24Q969Q5 203 aa4.81□□□□□ -1.64
ATPAF1-204ENST00000474020 ISOC2Q96AB3 205 aa4.81□□□□□ -1.64
ATPAF1-204ENST00000474020 TMEM186Q96B77 213 aa4.81□□□□□ -1.64
ATPAF1-204ENST00000474020 RPUSD4Q96CM3 377 aaKnown RBP4.81□□□□□ -1.64
ATPAF1-204ENST00000474020 SLC35E1Q96K37 410 aa4.81□□□□□ -1.64
ATPAF1-204ENST00000474020 RNF2Q99496 336 aa4.81□□□□□ -1.64
ATPAF1-204ENST00000474020 VKORC1Q9BQB6 163 aa4.81□□□□□ -1.64
ATPAF1-204ENST00000474020 C19orf24Q9BVV8 132 aa4.81□□□□□ -1.64
ATPAF1-204ENST00000474020 COMMD5Q9GZQ3 224 aa4.81□□□□□ -1.64
ATPAF1-204ENST00000474020 CHODLQ9H9P2 273 aa4.81□□□□□ -1.64
ATPAF1-204ENST00000474020 NPVFQ9HCQ7 196 aa4.81□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 105.1 ms