RNA–Protein interactions for RNA: ENST00000465591.1

LIME1-203, Transcript of Lck interacting transmembrane adaptor 1, humanhuman

TSL 2

Gene LIME1, Length 680 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIME1-203ENST00000465591 ERVK-16P61578 105 aa16.5■□□□□ 0.23
LIME1-203ENST00000465591 WT1-ASQ06250 92 aa16.5■□□□□ 0.23
LIME1-203ENST00000465591 TBC1D26Q86UD7 250 aa16.5■□□□□ 0.23
LIME1-203ENST00000465591 LAX1Q8IWV1 398 aa16.5■□□□□ 0.23
LIME1-203ENST00000465591 RABL2AQ9UBK7 228 aaPredicted RBP16.5■□□□□ 0.23
LIME1-203ENST00000465591 PEMTQ9UBM1 199 aa16.5■□□□□ 0.23
LIME1-203ENST00000465591 RABL2BQ9UNT1 228 aa16.5■□□□□ 0.23
LIME1-203ENST00000465591 DBX1A6NMT0 343 aa16.49■□□□□ 0.23
LIME1-203ENST00000465591 H0Y980 276 aa16.49■□□□□ 0.23
LIME1-203ENST00000465591 IGKV1-39P01597 117 aa16.49■□□□□ 0.23
LIME1-203ENST00000465591 IGKV1D-39P04432 117 aa16.49■□□□□ 0.23
LIME1-203ENST00000465591 ARL3P36405 182 aa16.49■□□□□ 0.23
LIME1-203ENST00000465591 UCP3P55916 312 aa16.49■□□□□ 0.23
LIME1-203ENST00000465591 EEF1AKMT3Q96AZ1 226 aa16.49■□□□□ 0.23
LIME1-203ENST00000465591 DIRAS2Q96HU8 199 aa16.49■□□□□ 0.23
LIME1-203ENST00000465591 SRSF8Q9BRL6 282 aaKnown RBP16.49■□□□□ 0.23
LIME1-203ENST00000465591 NDUFA4L2Q9NRX3 87 aa16.49■□□□□ 0.23
LIME1-203ENST00000465591 C2orf70A6NJV1 201 aa16.48■□□□□ 0.23
LIME1-203ENST00000465591 CD3DP04234 171 aa16.48■□□□□ 0.23
LIME1-203ENST00000465591 TRAPPC2P0DI81 140 aa16.48■□□□□ 0.23
LIME1-203ENST00000465591 TRAPPC2BP0DI82 140 aa16.48■□□□□ 0.23
LIME1-203ENST00000465591 OR13C7P0DN81 318 aa16.48■□□□□ 0.23
LIME1-203ENST00000465591 S100A5P33763 92 aa16.48■□□□□ 0.23
LIME1-203ENST00000465591 MFAP2P55001 183 aa16.48■□□□□ 0.23
LIME1-203ENST00000465591 CD300EQ496F6 205 aaPredicted RBP16.48■□□□□ 0.23
LIME1-203ENST00000465591 FAM209BQ5JX69 171 aa16.48■□□□□ 0.23
LIME1-203ENST00000465591 CADM3Q8N126 398 aa16.48■□□□□ 0.23
LIME1-203ENST00000465591 Q8N402 240 aa16.48■□□□□ 0.23
LIME1-203ENST00000465591 OR1L8Q8NGR8 309 aa16.48■□□□□ 0.23
LIME1-203ENST00000465591 ZC4H2Q9NQZ6 224 aa16.48■□□□□ 0.23
LIME1-203ENST00000465591 C19orf73Q9NVV2 129 aa16.48■□□□□ 0.23
LIME1-203ENST00000465591 MTFP1Q9UDX5 166 aa16.48■□□□□ 0.23
LIME1-203ENST00000465591 NBEAL2Q6ZNJ1 2754 aa16.47■□□□□ 0.23
LIME1-203ENST00000465591 LCN12Q6JVE5 192 aa16.47■□□□□ 0.23
LIME1-203ENST00000465591 LPCAT3Q6P1A2 487 aa16.47■□□□□ 0.23
LIME1-203ENST00000465591 LHFPL1Q86WI0 220 aa16.47■□□□□ 0.23
LIME1-203ENST00000465591 GPHB5Q86YW7 130 aa16.47■□□□□ 0.23
LIME1-203ENST00000465591 SLC38A6Q8IZM9 456 aa16.47■□□□□ 0.23
LIME1-203ENST00000465591 GDPD1Q8N9F7 314 aa16.47■□□□□ 0.23
LIME1-203ENST00000465591 OR4D10Q8NGI6 311 aa16.47■□□□□ 0.23
LIME1-203ENST00000465591 ZNF502Q8TBZ5 544 aa16.47■□□□□ 0.23
LIME1-203ENST00000465591 CACNG8Q8WXS5 425 aa16.47■□□□□ 0.23
LIME1-203ENST00000465591 HINT2Q9BX68 163 aa16.47■□□□□ 0.23
LIME1-203ENST00000465591 OR51B2Q9Y5P1 312 aa16.47■□□□□ 0.23
LIME1-203ENST00000465591 SELENOKQ9Y6D0 94 aa16.47■□□□□ 0.23
LIME1-203ENST00000465591 LGALS9O00182 355 aa16.46■□□□□ 0.23
LIME1-203ENST00000465591 CLEC3BP05452 202 aa16.46■□□□□ 0.23
LIME1-203ENST00000465591 SERPINE2P07093 398 aa16.46■□□□□ 0.23
LIME1-203ENST00000465591 FOLR2P14207 255 aa16.46■□□□□ 0.23
LIME1-203ENST00000465591 PI3P19957 117 aa16.46■□□□□ 0.23
LIME1-203ENST00000465591 SEC22AQ96IW7 307 aa16.46■□□□□ 0.23
LIME1-203ENST00000465591 BATF3Q9NR55 127 aa16.46■□□□□ 0.23
LIME1-203ENST00000465591 TRBV7-1A0A0A6YYK4 115 aa16.45■□□□□ 0.22
LIME1-203ENST00000465591 TMEM213A2RRL7 107 aa16.45■□□□□ 0.22
LIME1-203ENST00000465591 A6NHS1 94 aa16.45■□□□□ 0.22
LIME1-203ENST00000465591 ZNF785A8K8V0 405 aa16.45■□□□□ 0.22
LIME1-203ENST00000465591 A8MZ25 164 aa16.45■□□□□ 0.22
LIME1-203ENST00000465591 GPR183P32249 361 aa16.45■□□□□ 0.22
LIME1-203ENST00000465591 TNFSF8P32971 234 aa16.45■□□□□ 0.22
LIME1-203ENST00000465591 DEFB114Q30KQ6 69 aa16.45■□□□□ 0.22
LIME1-203ENST00000465591 RNASE10Q5GAN6 216 aaKnown RBP16.45■□□□□ 0.22
LIME1-203ENST00000465591 THOC7Q6I9Y2 204 aaKnown RBP16.45■□□□□ 0.22
LIME1-203ENST00000465591 SGPP2Q8IWX5 399 aa16.45■□□□□ 0.22
LIME1-203ENST00000465591 CXorf58Q96LI9 332 aa16.45■□□□□ 0.22
LIME1-203ENST00000465591 RCHY1Q96PM5 261 aa16.45■□□□□ 0.22
LIME1-203ENST00000465591 FAM212BQ9NTI7 297 aaPredicted RBP16.45■□□□□ 0.22
LIME1-203ENST00000465591 TMEM14BQ9NUH8 114 aa16.45■□□□□ 0.22
LIME1-203ENST00000465591 C15orf61A6NNL5 157 aa16.44■□□□□ 0.22
LIME1-203ENST00000465591 SNAPC5O75971 98 aa16.44■□□□□ 0.22
LIME1-203ENST00000465591 PTBP1P26599 531 aaKnown RBP eCLIP16.44■□□□□ 0.22
LIME1-203ENST00000465591 MRPS10P82664 201 aaKnown RBP16.44■□□□□ 0.22
LIME1-203ENST00000465591 IL18Q14116 193 aa16.44■□□□□ 0.22
LIME1-203ENST00000465591 UNQ9165/PRO28630Q6UXU0 137 aa16.44■□□□□ 0.22
LIME1-203ENST00000465591 OR2K2Q8NGT1 345 aa16.44■□□□□ 0.22
LIME1-203ENST00000465591 LSM10Q969L4 123 aaKnown RBP16.44■□□□□ 0.22
LIME1-203ENST00000465591 MRGPRFQ96AM1 343 aa16.44■□□□□ 0.22
LIME1-203ENST00000465591 DNAH7Q8WXX0 4024 aa16.44■□□□□ 0.22
LIME1-203ENST00000465591 IGHV3-21A0A0B4J1V1 117 aa16.43■□□□□ 0.22
LIME1-203ENST00000465591 IGHV3-35A0A0C4DH35 117 aa16.43■□□□□ 0.22
LIME1-203ENST00000465591 FABP12A6NFH5 140 aa16.43■□□□□ 0.22
LIME1-203ENST00000465591 CD74P04233 296 aa16.43■□□□□ 0.22
LIME1-203ENST00000465591 IFNA6P05013 189 aa16.43■□□□□ 0.22
LIME1-203ENST00000465591 PGAM2P15259 253 aa16.43■□□□□ 0.22
LIME1-203ENST00000465591 S100GP29377 79 aa16.43■□□□□ 0.22
LIME1-203ENST00000465591 SLC25A24Q6NUK1 477 aa16.43■□□□□ 0.22
LIME1-203ENST00000465591 ARRDC1Q8N5I2 433 aa16.43■□□□□ 0.22
LIME1-203ENST00000465591 DYNLRB2Q8TF09 96 aa16.43■□□□□ 0.22
LIME1-203ENST00000465591 PRNDQ9UKY0 176 aa16.43■□□□□ 0.22
LIME1-203ENST00000465591 F11RQ9Y624 299 aaKnown RBP16.43■□□□□ 0.22
LIME1-203ENST00000465591 ZNF320A2RRD8 509 aa16.42■□□□□ 0.22
LIME1-203ENST00000465591 A8MWP6 167 aa16.42■□□□□ 0.22
LIME1-203ENST00000465591 CBLN1P23435 193 aa16.42■□□□□ 0.22
LIME1-203ENST00000465591 PPP5CP53041 499 aa16.42■□□□□ 0.22
LIME1-203ENST00000465591 RND3P61587 244 aa16.42■□□□□ 0.22
LIME1-203ENST00000465591 IZUMO4Q1ZYL8 232 aa16.42■□□□□ 0.22
LIME1-203ENST00000465591 HSD17B13Q7Z5P4 300 aaPredicted RBP16.42■□□□□ 0.22
LIME1-203ENST00000465591 TMEM229BQ8NBD8 167 aa16.42■□□□□ 0.22
LIME1-203ENST00000465591 OR5B3Q8NH48 314 aa16.42■□□□□ 0.22
LIME1-203ENST00000465591 TM2D3Q9BRN9 247 aa16.42■□□□□ 0.22
LIME1-203ENST00000465591 GABARAPH6UMI1 98 aa16.41■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 83.9 ms