RNA–Protein interactions for RNA: ENST00000465073.6

USP42-205, Transcript of ubiquitin specific peptidase 42, humanhuman

TSL 5

Gene USP42, Length 1,490 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP42-205ENST00000465073 TGOLN2O43493 480 aa16.96■□□□□ 0.31
USP42-205ENST00000465073 S1PR2O95136 353 aa16.96■□□□□ 0.31
USP42-205ENST00000465073 APOC4P55056 127 aa16.96■□□□□ 0.31
USP42-205ENST00000465073 AADACL3Q5VUY0 350 aa16.96■□□□□ 0.31
USP42-205ENST00000465073 Q6ZWC4 215 aa16.96■□□□□ 0.31
USP42-205ENST00000465073 WFDC3Q8IUB2 231 aa16.96■□□□□ 0.31
USP42-205ENST00000465073 GDPD1Q8N9F7 314 aa16.96■□□□□ 0.31
USP42-205ENST00000465073 OR10W1Q8NGF6 305 aa16.96■□□□□ 0.31
USP42-205ENST00000465073 COMMD9Q9P000 198 aa16.96■□□□□ 0.31
USP42-205ENST00000465073 PLECQ15149 4684 aaKnown RBP16.95■□□□□ 0.3
USP42-205ENST00000465073 FCER2P06734 321 aa16.95■□□□□ 0.3
USP42-205ENST00000465073 TRAPPC2P0DI81 140 aa16.95■□□□□ 0.3
USP42-205ENST00000465073 TRAPPC2BP0DI82 140 aa16.95■□□□□ 0.3
USP42-205ENST00000465073 OR13C7P0DN81 318 aa16.95■□□□□ 0.3
USP42-205ENST00000465073 TMEM190Q8WZ59 177 aa16.95■□□□□ 0.3
USP42-205ENST00000465073 TSPAN4O14817 238 aa16.94■□□□□ 0.3
USP42-205ENST00000465073 SERPINE2P07093 398 aa16.94■□□□□ 0.3
USP42-205ENST00000465073 HERV-K104P61576 105 aa16.94■□□□□ 0.3
USP42-205ENST00000465073 ERVK-16P61578 105 aa16.94■□□□□ 0.3
USP42-205ENST00000465073 SLC25A24Q6NUK1 477 aa16.94■□□□□ 0.3
USP42-205ENST00000465073 TMEM17Q86X19 198 aa16.94■□□□□ 0.3
USP42-205ENST00000465073 OR1L8Q8NGR8 309 aa16.94■□□□□ 0.3
USP42-205ENST00000465073 LINC00476Q8WZB0 136 aa16.94■□□□□ 0.3
USP42-205ENST00000465073 BSCL2Q96G97 398 aaPredicted RBP16.94■□□□□ 0.3
USP42-205ENST00000465073 ATP6V0BQ99437 205 aa16.94■□□□□ 0.3
USP42-205ENST00000465073 Q9H521 79 aa16.94■□□□□ 0.3
USP42-205ENST00000465073 RNF167Q9H6Y7 350 aa16.94■□□□□ 0.3
USP42-205ENST00000465073 DAZ1Q9NQZ3 744 aaKnown RBP16.94■□□□□ 0.3
USP42-205ENST00000465073 TEX50A0A1B0GTY4 177 aa16.93■□□□□ 0.3
USP42-205ENST00000465073 CXorf65A6NEN9 183 aa16.93■□□□□ 0.3
USP42-205ENST00000465073 OR2T8A6NH00 312 aa16.93■□□□□ 0.3
USP42-205ENST00000465073 UBE2CO00762 179 aa16.93■□□□□ 0.3
USP42-205ENST00000465073 SPRY2O43597 315 aa16.93■□□□□ 0.3
USP42-205ENST00000465073 TMEM127O75204 238 aa16.93■□□□□ 0.3
USP42-205ENST00000465073 GNRHRP30968 328 aa16.93■□□□□ 0.3
USP42-205ENST00000465073 WT1-ASQ06250 92 aa16.93■□□□□ 0.3
USP42-205ENST00000465073 TNFRSF9Q07011 255 aa16.93■□□□□ 0.3
USP42-205ENST00000465073 LAMTOR1Q6IAA8 161 aa16.93■□□□□ 0.3
USP42-205ENST00000465073 SPSB3Q6PJ21 355 aa16.93■□□□□ 0.3
USP42-205ENST00000465073 LOC100506127A0A0U1RQW1 187 aa16.93■□□□□ 0.3
USP42-205ENST00000465073 BMI1P35226 326 aa16.93■□□□□ 0.3
USP42-205ENST00000465073 DHRS11Q6UWP2 260 aa16.93■□□□□ 0.3
USP42-205ENST00000465073 ALMS1Q8TCU4 4167 aa16.92■□□□□ 0.3
USP42-205ENST00000465073 A0A0J9YWU9 116 aa16.92■□□□□ 0.3
USP42-205ENST00000465073 NUPR2A6NF83 97 aa16.92■□□□□ 0.3
USP42-205ENST00000465073 RPA2P15927 270 aa16.92■□□□□ 0.3
USP42-205ENST00000465073 CADM3Q8N126 398 aa16.92■□□□□ 0.3
USP42-205ENST00000465073 IFT46Q9NQC8 304 aa16.92■□□□□ 0.3
USP42-205ENST00000465073 NDUFA4L2Q9NRX3 87 aa16.92■□□□□ 0.3
USP42-205ENST00000465073 KIR2DL5BA0A0G2JN68 375 aa16.91■□□□□ 0.3
USP42-205ENST00000465073 KIR2DL5BA0A0G2JPC4 375 aa16.91■□□□□ 0.3
USP42-205ENST00000465073 MARCH11A6NNE9 402 aa16.91■□□□□ 0.3
USP42-205ENST00000465073 NDUFA4O00483 81 aa16.91■□□□□ 0.3
USP42-205ENST00000465073 F2RP25116 425 aa16.91■□□□□ 0.3
USP42-205ENST00000465073 PMS2P11Q13670 270 aa16.91■□□□□ 0.3
USP42-205ENST00000465073 LYG2Q86SG7 212 aa16.91■□□□□ 0.3
USP42-205ENST00000465073 KIR2DL5AQ8N109 375 aa16.91■□□□□ 0.3
USP42-205ENST00000465073 KIR2DL5BQ8NHK3 375 aa16.91■□□□□ 0.3
USP42-205ENST00000465073 LSM10Q969L4 123 aaKnown RBP16.91■□□□□ 0.3
USP42-205ENST00000465073 C21orf62Q9NYP8 219 aa16.91■□□□□ 0.3
USP42-205ENST00000465073 EHFQ9NZC4 300 aa16.91■□□□□ 0.3
USP42-205ENST00000465073 UBQLN2Q9UHD9 624 aa16.91■□□□□ 0.3
USP42-205ENST00000465073 F11RQ9Y624 299 aaKnown RBP16.91■□□□□ 0.3
USP42-205ENST00000465073 MEIS3P1A6NDR6 274 aa16.9■□□□□ 0.3
USP42-205ENST00000465073 K7EMT4 169 aa16.9■□□□□ 0.3
USP42-205ENST00000465073 XRCC3O43542 346 aa16.9■□□□□ 0.3
USP42-205ENST00000465073 PGLYRP1O75594 196 aaPredicted RBP16.9■□□□□ 0.3
USP42-205ENST00000465073 ATF4P18848 351 aaPredicted RBP16.9■□□□□ 0.3
USP42-205ENST00000465073 STPG3Q8N7X2 389 aa16.9■□□□□ 0.3
USP42-205ENST00000465073 SCARB1Q8WTV0 552 aa16.9■□□□□ 0.3
USP42-205ENST00000465073 LY6G6CO95867 125 aa16.89■□□□□ 0.29
USP42-205ENST00000465073 RLN1P04808 185 aa16.89■□□□□ 0.29
USP42-205ENST00000465073 MFAP2P55001 183 aa16.89■□□□□ 0.29
USP42-205ENST00000465073 DEFB135Q30KP9 77 aa16.89■□□□□ 0.29
USP42-205ENST00000465073 MOB3AQ96BX8 217 aa16.89■□□□□ 0.29
USP42-205ENST00000465073 DGCR14Q96DF8 476 aaKnown RBP16.89■□□□□ 0.29
USP42-205ENST00000465073 S100A16Q96FQ6 103 aaKnown RBP16.89■□□□□ 0.29
USP42-205ENST00000465073 CHRDL1Q9BU40 450 aa16.89■□□□□ 0.29
USP42-205ENST00000465073 C20orf24Q9BUV8 137 aa16.89■□□□□ 0.29
USP42-205ENST00000465073 HINT2Q9BX68 163 aa16.89■□□□□ 0.29
USP42-205ENST00000465073 OR51B2Q9Y5P1 312 aa16.89■□□□□ 0.29
USP42-205ENST00000465073 OR4C46A6NHA9 309 aa16.88■□□□□ 0.29
USP42-205ENST00000465073 SNAPC5O75971 98 aa16.88■□□□□ 0.29
USP42-205ENST00000465073 KRASP01116 189 aa16.88■□□□□ 0.29
USP42-205ENST00000465073 LPAR6P43657 344 aa16.88■□□□□ 0.29
USP42-205ENST00000465073 RFX2P48378 723 aa16.88■□□□□ 0.29
USP42-205ENST00000465073 EWSR1Q01844 656 aaKnown RBP eCLIP16.88■□□□□ 0.29
USP42-205ENST00000465073 ODF3L2Q3SX64 289 aa16.88■□□□□ 0.29
USP42-205ENST00000465073 CEMP1Q6PRD7 247 aaPredicted RBP16.88■□□□□ 0.29
USP42-205ENST00000465073 CMTM1Q8IZ96 169 aa16.88■□□□□ 0.29
USP42-205ENST00000465073 FCAMRQ8WWV6 532 aa16.88■□□□□ 0.29
USP42-205ENST00000465073 RNF183Q96D59 192 aa16.88■□□□□ 0.29
USP42-205ENST00000465073 ZNF2Q9BSG1 426 aaPredicted RBP16.88■□□□□ 0.29
USP42-205ENST00000465073 CROCCP3Q8IVE0 287 aa16.87■□□□□ 0.29
USP42-205ENST00000465073 TSPAN14Q8NG11 270 aa16.87■□□□□ 0.29
USP42-205ENST00000465073 FKBP11Q9NYL4 201 aa16.87■□□□□ 0.29
USP42-205ENST00000465073 PRNDQ9UKY0 176 aa16.87■□□□□ 0.29
USP42-205ENST00000465073 ANAPC10Q9UM13 185 aa16.87■□□□□ 0.29
USP42-205ENST00000465073 IGHV3-21A0A0B4J1V1 117 aa16.86■□□□□ 0.29
USP42-205ENST00000465073 C15orf62A8K5M9 175 aa16.86■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 111.9 ms