RNA–Protein interactions for RNA: ENST00000462730.5

HDAC6-213, Transcript of histone deacetylase 6, humanhuman

TSL 1 (best)

Gene HDAC6, Length 1,999 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-213ENST00000462730 DLX1P56177 255 aa11.76□□□□□ -0.53
HDAC6-213ENST00000462730 RAB4BP61018 213 aa11.76□□□□□ -0.53
HDAC6-213ENST00000462730 HAGHQ16775 308 aa11.76□□□□□ -0.53
HDAC6-213ENST00000462730 PDLIM3Q53GG5 364 aaPredicted RBP11.76□□□□□ -0.53
HDAC6-213ENST00000462730 OR10P1Q8NGE3 313 aa11.76□□□□□ -0.53
HDAC6-213ENST00000462730 NABP2Q9BQ15 211 aa11.76□□□□□ -0.53
HDAC6-213ENST00000462730 TMEM147Q9BVK8 224 aa11.76□□□□□ -0.53
HDAC6-213ENST00000462730 PARD6GQ9BYG4 376 aaPredicted RBP11.76□□□□□ -0.53
HDAC6-213ENST00000462730 HIPK2Q9H2X6 1198 aa11.76□□□□□ -0.53
HDAC6-213ENST00000462730 HEYLQ9NQ87 328 aaPredicted RBP11.76□□□□□ -0.53
HDAC6-213ENST00000462730 DOCK11Q5JSL3 2073 aa11.76□□□□□ -0.53
HDAC6-213ENST00000462730 SRRM4A7MD48 611 aaKnown RBP11.76□□□□□ -0.53
HDAC6-213ENST00000462730 TAGLN2P37802 199 aaKnown RBP11.76□□□□□ -0.53
HDAC6-213ENST00000462730 GPR6P46095 362 aaPredicted RBP11.76□□□□□ -0.53
HDAC6-213ENST00000462730 ZNF137PP52743 207 aa11.76□□□□□ -0.53
HDAC6-213ENST00000462730 CEBPGP53567 150 aa11.76□□□□□ -0.53
HDAC6-213ENST00000462730 PRB3Q04118 309 aaPredicted RBP11.76□□□□□ -0.53
HDAC6-213ENST00000462730 KIAA0141Q14154 515 aaPredicted RBP11.76□□□□□ -0.53
HDAC6-213ENST00000462730 ICAM4Q14773 271 aa11.76□□□□□ -0.53
HDAC6-213ENST00000462730 ATP6V1FQ16864 119 aa11.76□□□□□ -0.53
HDAC6-213ENST00000462730 OR5AN1Q8NGI8 311 aa11.76□□□□□ -0.53
HDAC6-213ENST00000462730 ST6GALNAC6Q969X2 333 aa11.76□□□□□ -0.53
HDAC6-213ENST00000462730 PINX1Q96BK5 328 aaKnown RBP11.76□□□□□ -0.53
HDAC6-213ENST00000462730 HARBI1Q96MB7 349 aa11.76□□□□□ -0.53
HDAC6-213ENST00000462730 WDR61Q9GZS3 305 aaKnown RBP11.76□□□□□ -0.53
HDAC6-213ENST00000462730 TMEM14BQ9NUH8 114 aa11.76□□□□□ -0.53
HDAC6-213ENST00000462730 GAR1Q9NY12 217 aaKnown RBP11.76□□□□□ -0.53
HDAC6-213ENST00000462730 ONECUT1Q9UBC0 465 aa11.76□□□□□ -0.53
HDAC6-213ENST00000462730 MALRD1Q5VYJ5 2156 aa11.75□□□□□ -0.53
HDAC6-213ENST00000462730 IGHV2-26A0A0B4J1V2 119 aa11.75□□□□□ -0.53
HDAC6-213ENST00000462730 A1L4Q6 167 aa11.75□□□□□ -0.53
HDAC6-213ENST00000462730 ZNF727A8MUV8 499 aa11.75□□□□□ -0.53
HDAC6-213ENST00000462730 C22orf46C9J442 243 aa11.75□□□□□ -0.53
HDAC6-213ENST00000462730 UPK2O00526 184 aa11.75□□□□□ -0.53
HDAC6-213ENST00000462730 SCAF4O95104 1147 aaKnown RBP11.75□□□□□ -0.53
HDAC6-213ENST00000462730 HSPB1P04792 205 aaKnown RBP11.75□□□□□ -0.53
HDAC6-213ENST00000462730 GNB2P62879 340 aa11.75□□□□□ -0.53
HDAC6-213ENST00000462730 RPP30P78346 268 aaKnown RBP11.75□□□□□ -0.53
HDAC6-213ENST00000462730 ZNF506Q5JVG8 444 aa11.75□□□□□ -0.53
HDAC6-213ENST00000462730 TGIF2LXQ8IUE1 241 aa11.75□□□□□ -0.53
HDAC6-213ENST00000462730 CYB561D1Q8N8Q1 229 aa11.75□□□□□ -0.53
HDAC6-213ENST00000462730 OSR1Q8TAX0 266 aaPredicted RBP11.75□□□□□ -0.53
HDAC6-213ENST00000462730 IGFBPL1Q8WX77 278 aa11.75□□□□□ -0.53
HDAC6-213ENST00000462730 PFDN5Q99471 154 aa11.75□□□□□ -0.53
HDAC6-213ENST00000462730 CCL19Q99731 98 aa11.75□□□□□ -0.53
HDAC6-213ENST00000462730 PATZ1Q9HBE1 687 aaKnown RBP11.75□□□□□ -0.53
HDAC6-213ENST00000462730 PRNDQ9UKY0 176 aa11.75□□□□□ -0.53
HDAC6-213ENST00000462730 OR51B2Q9Y5P1 312 aa11.75□□□□□ -0.53
HDAC6-213ENST00000462730 B4DEV8 164 aa11.74□□□□□ -0.53
HDAC6-213ENST00000462730 RBP4P02753 201 aa11.74□□□□□ -0.53
HDAC6-213ENST00000462730 SAA1P0DJI8 122 aaPredicted RBP11.74□□□□□ -0.53
HDAC6-213ENST00000462730 MYOD1P15172 320 aa11.74□□□□□ -0.53
HDAC6-213ENST00000462730 HSPE1P61604 102 aaKnown RBP11.74□□□□□ -0.53
HDAC6-213ENST00000462730 DLK1P80370 383 aa11.74□□□□□ -0.53
HDAC6-213ENST00000462730 TET2Q6N021 2002 aaPredicted RBP11.74□□□□□ -0.53
HDAC6-213ENST00000462730 DPPA3Q6W0C5 159 aa11.74□□□□□ -0.53
HDAC6-213ENST00000462730 LY6G5BQ8NDX9 201 aa11.74□□□□□ -0.53
HDAC6-213ENST00000462730 TAF15Q92804 592 aaKnown RBP eCLIP11.74□□□□□ -0.535e-10■□□□□ 10.5
HDAC6-213ENST00000462730 PSMG3Q9BT73 122 aaPredicted RBP11.74□□□□□ -0.53
HDAC6-213ENST00000462730 LIPFP07098 398 aa11.74□□□□□ -0.53
HDAC6-213ENST00000462730 IL6RP08887 468 aaPredicted RBP11.74□□□□□ -0.53
HDAC6-213ENST00000462730 COX7A1P24310 79 aa11.74□□□□□ -0.53
HDAC6-213ENST00000462730 PRRX1P54821 245 aa11.74□□□□□ -0.53
HDAC6-213ENST00000462730 ELOBQ15370 118 aa11.74□□□□□ -0.53
HDAC6-213ENST00000462730 TMEM177Q53S58 311 aa11.74□□□□□ -0.53
HDAC6-213ENST00000462730 PDPNQ86YL7 162 aa11.74□□□□□ -0.53
HDAC6-213ENST00000462730 CLDND2Q8NHS1 167 aa11.74□□□□□ -0.53
HDAC6-213ENST00000462730 Q8WTZ3 238 aa11.74□□□□□ -0.53
HDAC6-213ENST00000462730 TNFRSF14Q92956 283 aa11.74□□□□□ -0.53
HDAC6-213ENST00000462730 FLYWCH2Q96CP2 140 aaKnown RBP11.74□□□□□ -0.53
HDAC6-213ENST00000462730 HINT2Q9BX68 163 aa11.74□□□□□ -0.53
HDAC6-213ENST00000462730 CLEC7AQ9BXN2 247 aa11.74□□□□□ -0.53
HDAC6-213ENST00000462730 ENY2Q9NPA8 101 aa11.74□□□□□ -0.53
HDAC6-213ENST00000462730 AKAP6Q13023 2319 aa11.74□□□□□ -0.53
HDAC6-213ENST00000462730 YIF1AO95070 293 aa11.73□□□□□ -0.53
HDAC6-213ENST00000462730 IGHV4-39P01824 125 aa11.73□□□□□ -0.53
HDAC6-213ENST00000462730 FGF7P21781 194 aa11.73□□□□□ -0.53
HDAC6-213ENST00000462730 GPX4P36969 197 aaPredicted RBP11.73□□□□□ -0.53
HDAC6-213ENST00000462730 HLA-DRB5Q30154 266 aa11.73□□□□□ -0.53
HDAC6-213ENST00000462730 ZNF343Q6P1L6 599 aa11.73□□□□□ -0.53
HDAC6-213ENST00000462730 OR10G4Q8NGN3 311 aa11.73□□□□□ -0.53
HDAC6-213ENST00000462730 LHX4Q969G2 390 aa11.73□□□□□ -0.53
HDAC6-213ENST00000462730 TVP23CQ96ET8 276 aa11.73□□□□□ -0.53
HDAC6-213ENST00000462730 NIPSNAP3BQ9BS92 247 aa11.73□□□□□ -0.53
HDAC6-213ENST00000462730 PCGF1Q9BSM1 259 aa11.73□□□□□ -0.53
HDAC6-213ENST00000462730 SSBP3Q9BWW4 388 aaPredicted RBP11.73□□□□□ -0.53
HDAC6-213ENST00000462730 BET1LQ9NYM9 111 aa11.73□□□□□ -0.53
HDAC6-213ENST00000462730 WASHC3Q9Y3C0 194 aa11.73□□□□□ -0.53
HDAC6-213ENST00000462730 UTP20O75691 2785 aaKnown RBP11.73□□□□□ -0.53
HDAC6-213ENST00000462730 IFITM10A6NMD0 228 aa11.72□□□□□ -0.53
HDAC6-213ENST00000462730 KBTBD11O94819 623 aa11.72□□□□□ -0.53
HDAC6-213ENST00000462730 HBE1P02100 147 aa11.72□□□□□ -0.53
HDAC6-213ENST00000462730 CXCL1P09341 107 aa11.72□□□□□ -0.53
HDAC6-213ENST00000462730 CBY1Q9Y3M2 126 aa11.72□□□□□ -0.53
HDAC6-213ENST00000462730 LOC105371242A0A075B767 164 aa11.72□□□□□ -0.53
HDAC6-213ENST00000462730 RRHO14718 337 aa11.72□□□□□ -0.53
HDAC6-213ENST00000462730 IGLV1-47P01700 117 aa11.72□□□□□ -0.53
HDAC6-213ENST00000462730 HIST1H1BP16401 226 aaKnown RBP11.72□□□□□ -0.53
HDAC6-213ENST00000462730 HNF4GQ14541 408 aa11.72□□□□□ -0.53
HDAC6-213ENST00000462730 ZNF674Q2M3X9 581 aa11.72□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 133.2 ms