RNA–Protein interactions for RNA: ENST00000455661.5

PTPRE-204, Transcript of protein tyrosine phosphatase, receptor type E, humanhuman

TSL 2

Gene PTPRE, Length 2,304 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRE-204ENST00000455661 RELBQ01201 579 aa11.34□□□□□ -0.59
PTPRE-204ENST00000455661 LTC4SQ16873 150 aa11.34□□□□□ -0.59
PTPRE-204ENST00000455661 MIR17HGQ75NE6 70 aa11.34□□□□□ -0.59
PTPRE-204ENST00000455661 VKORC1L1Q8N0U8 176 aa11.34□□□□□ -0.59
PTPRE-204ENST00000455661 TPRX1Q8N7U7 411 aa11.34□□□□□ -0.59
PTPRE-204ENST00000455661 PRR7Q8TB68 274 aa11.34□□□□□ -0.59
PTPRE-204ENST00000455661 PLEKHA3Q9HB20 300 aa11.34□□□□□ -0.59
PTPRE-204ENST00000455661 TRIOO75962 3097 aa11.33□□□□□ -0.6
PTPRE-204ENST00000455661 TRAV9-2A0A087WT02 112 aa11.33□□□□□ -0.6
PTPRE-204ENST00000455661 IQCF6A8MYZ5 107 aa11.33□□□□□ -0.6
PTPRE-204ENST00000455661 M0R1X1 148 aa11.33□□□□□ -0.6
PTPRE-204ENST00000455661 HSBP1O75506 76 aa11.33□□□□□ -0.6
PTPRE-204ENST00000455661 NPY1RP25929 384 aa11.33□□□□□ -0.6
PTPRE-204ENST00000455661 ALKBH6Q3KRA9 238 aa11.33□□□□□ -0.6
PTPRE-204ENST00000455661 CXorf67Q86X51 503 aaPredicted RBP11.33□□□□□ -0.6
PTPRE-204ENST00000455661 OR4C5Q8NGB2 326 aa11.33□□□□□ -0.6
PTPRE-204ENST00000455661 SLC25A40Q8TBP6 338 aa11.33□□□□□ -0.6
PTPRE-204ENST00000455661 CLEC7AQ9BXN2 247 aa11.33□□□□□ -0.6
PTPRE-204ENST00000455661 FAM234AQ9H0X4 552 aa11.33□□□□□ -0.6
PTPRE-204ENST00000455661 TECRQ9NZ01 308 aaKnown RBP11.33□□□□□ -0.6
PTPRE-204ENST00000455661 IGHV2OR16-5A0A0B4J2B6 119 aa11.32□□□□□ -0.6
PTPRE-204ENST00000455661 SP1P08047 785 aa11.32□□□□□ -0.6
PTPRE-204ENST00000455661 LINC00869P0C866 280 aa11.32□□□□□ -0.6
PTPRE-204ENST00000455661 TNFSF4P23510 183 aa11.32□□□□□ -0.6
PTPRE-204ENST00000455661 FBLN7Q53RD9 439 aa11.32□□□□□ -0.6
PTPRE-204ENST00000455661 ACP7Q6ZNF0 438 aa11.32□□□□□ -0.6
PTPRE-204ENST00000455661 Q6ZR03 302 aa11.32□□□□□ -0.6
PTPRE-204ENST00000455661 ZNF826PQ6ZT77 177 aa11.32□□□□□ -0.6
PTPRE-204ENST00000455661 SLC24A4Q8NFF2 622 aa11.32□□□□□ -0.6
PTPRE-204ENST00000455661 S1PR3Q99500 378 aa11.32□□□□□ -0.6
PTPRE-204ENST00000455661 GCM1Q9NP62 436 aa11.32□□□□□ -0.6
PTPRE-204ENST00000455661 TMEM140Q9NV12 185 aa11.32□□□□□ -0.6
PTPRE-204ENST00000455661 IGHV1-69-2A0A0G2JMI3 117 aa11.32□□□□□ -0.6
PTPRE-204ENST00000455661 MAGEA5P43359 124 aa11.32□□□□□ -0.6
PTPRE-204ENST00000455661 PRR20EP86478 221 aa11.32□□□□□ -0.6
PTPRE-204ENST00000455661 PRR20CP86479 221 aa11.32□□□□□ -0.6
PTPRE-204ENST00000455661 PRR20DP86480 221 aa11.32□□□□□ -0.6
PTPRE-204ENST00000455661 PRR20BP86481 221 aa11.32□□□□□ -0.6
PTPRE-204ENST00000455661 PRR20AP86496 221 aa11.32□□□□□ -0.6
PTPRE-204ENST00000455661 SSPNQ14714 243 aa11.32□□□□□ -0.6
PTPRE-204ENST00000455661 RTL8BQ17RB0 113 aa11.32□□□□□ -0.6
PTPRE-204ENST00000455661 RASL11AQ6T310 242 aa11.32□□□□□ -0.6
PTPRE-204ENST00000455661 C18orf32Q8TCD1 76 aa11.32□□□□□ -0.6
PTPRE-204ENST00000455661 GNG12Q9UBI6 72 aa11.32□□□□□ -0.6
PTPRE-204ENST00000455661 TRAV3A0A0B4J244 114 aa11.31□□□□□ -0.6
PTPRE-204ENST00000455661 IGFBP2P18065 325 aa11.31□□□□□ -0.6
PTPRE-204ENST00000455661 KIR2DS2P43631 304 aa11.31□□□□□ -0.6
PTPRE-204ENST00000455661 CXCL12P48061 93 aa11.31□□□□□ -0.6
PTPRE-204ENST00000455661 MAJINQ3KP22 176 aa11.31□□□□□ -0.6
PTPRE-204ENST00000455661 LCN12Q6JVE5 192 aa11.31□□□□□ -0.6
PTPRE-204ENST00000455661 Q8TCH9 128 aa11.31□□□□□ -0.6
PTPRE-204ENST00000455661 IGHV2-70DA0A0C4DH43 119 aa11.31□□□□□ -0.6
PTPRE-204ENST00000455661 M0R2Z0 102 aa11.31□□□□□ -0.6
PTPRE-204ENST00000455661 OR7C2O60412 319 aa11.31□□□□□ -0.6
PTPRE-204ENST00000455661 TFF1P04155 84 aa11.31□□□□□ -0.6
PTPRE-204ENST00000455661 PPOXP50336 477 aa11.31□□□□□ -0.6
PTPRE-204ENST00000455661 TAS2R45P59539 299 aa11.31□□□□□ -0.6
PTPRE-204ENST00000455661 Q6ZVH6 145 aa11.31□□□□□ -0.6
PTPRE-204ENST00000455661 LYG1Q8N1E2 194 aa11.31□□□□□ -0.6
PTPRE-204ENST00000455661 NABP2Q9BQ15 211 aa11.31□□□□□ -0.6
PTPRE-204ENST00000455661 COMMD5Q9GZQ3 224 aa11.31□□□□□ -0.6
PTPRE-204ENST00000455661 CACNA1EQ15878 2313 aa11.3□□□□□ -0.6
PTPRE-204ENST00000455661 IGLC7A0M8Q6 106 aa11.3□□□□□ -0.6
PTPRE-204ENST00000455661 FAM181BA6NEQ2 426 aa11.3□□□□□ -0.6
PTPRE-204ENST00000455661 C15orf65H3BRN8 121 aa11.3□□□□□ -0.6
PTPRE-204ENST00000455661 PROP1O75360 226 aa11.3□□□□□ -0.6
PTPRE-204ENST00000455661 CELA3BP08861 270 aa11.3□□□□□ -0.6
PTPRE-204ENST00000455661 TNXAQ16473 311 aa11.3□□□□□ -0.6
PTPRE-204ENST00000455661 FAM216AQ8WUB2 273 aa11.3□□□□□ -0.6
PTPRE-204ENST00000455661 TTTY12Q9BZ98 90 aa11.3□□□□□ -0.6
PTPRE-204ENST00000455661 CXXC4Q9H2H0 198 aa11.3□□□□□ -0.6
PTPRE-204ENST00000455661 FNDC10F2Z333 226 aa11.3□□□□□ -0.6
PTPRE-204ENST00000455661 NTN3O00634 580 aaPredicted RBP11.3□□□□□ -0.6
PTPRE-204ENST00000455661 SLAQ13239 276 aa11.3□□□□□ -0.6
PTPRE-204ENST00000455661 EDDM3AQ14507 147 aa11.3□□□□□ -0.6
PTPRE-204ENST00000455661 C3AR1Q16581 482 aa11.3□□□□□ -0.6
PTPRE-204ENST00000455661 SMIM21Q3B7S5 101 aa11.3□□□□□ -0.6
PTPRE-204ENST00000455661 Q56UQ5 140 aa11.3□□□□□ -0.6
PTPRE-204ENST00000455661 C11orf53Q8IXP5 236 aa11.3□□□□□ -0.6
PTPRE-204ENST00000455661 MUC15Q8N387 334 aa11.3□□□□□ -0.6
PTPRE-204ENST00000455661 WIPF2Q8TF74 440 aaPredicted RBP11.3□□□□□ -0.6
PTPRE-204ENST00000455661 PLPPR2Q96GM1 343 aa11.3□□□□□ -0.6
PTPRE-204ENST00000455661 JPT1Q9UK76 154 aa11.3□□□□□ -0.6
PTPRE-204ENST00000455661 CACNA1DQ01668 2161 aa11.29□□□□□ -0.6
PTPRE-204ENST00000455661 LOC105371242A0A075B767 164 aa11.29□□□□□ -0.6
PTPRE-204ENST00000455661 TRAV30A0A087WSZ9 112 aa11.29□□□□□ -0.6
PTPRE-204ENST00000455661 C15orf61A6NNL5 157 aa11.29□□□□□ -0.6
PTPRE-204ENST00000455661 HSPE1P61604 102 aaKnown RBP11.29□□□□□ -0.6
PTPRE-204ENST00000455661 UBE2G1P62253 170 aa11.29□□□□□ -0.6
PTPRE-204ENST00000455661 VAMP3Q15836 100 aa11.29□□□□□ -0.6
PTPRE-204ENST00000455661 ABHD17BQ5VST6 288 aa11.29□□□□□ -0.6
PTPRE-204ENST00000455661 NEUROG1Q92886 237 aa11.29□□□□□ -0.6
PTPRE-204ENST00000455661 HES7Q9BYE0 225 aa11.29□□□□□ -0.6
PTPRE-204ENST00000455661 SAP30LQ9HAJ7 183 aa11.29□□□□□ -0.6
PTPRE-204ENST00000455661 METRNQ9UJH8 293 aa11.29□□□□□ -0.6
PTPRE-204ENST00000455661 WDR87Q6ZQQ6 2873 aa11.29□□□□□ -0.6
PTPRE-204ENST00000455661 EYSQ5T1H1 3165 aa11.29□□□□□ -0.6
PTPRE-204ENST00000455661 HCFC1P51610 2035 aa11.29□□□□□ -0.6
PTPRE-204ENST00000455661 H0YJW9 148 aa11.29□□□□□ -0.6
PTPRE-204ENST00000455661 K7ESF4 209 aa11.29□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 54.2 ms