RNA–Protein interactions for RNA: ENST00000452448.6

EPHA3-202, Transcript of EPH receptor A3, humanhuman

TSL 1 (best) BASIC

Gene EPHA3, Length 2,546 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPHA3-202ENST00000452448 PGLYRP2Q96PD5 576 aa4.09□□□□□ -1.75
EPHA3-202ENST00000452448 CST11Q9H112 138 aa4.09□□□□□ -1.75
EPHA3-202ENST00000452448 KCNIP2Q9NS61 270 aa4.09□□□□□ -1.75
EPHA3-202ENST00000452448 KLF12Q9Y4X4 402 aa4.09□□□□□ -1.75
EPHA3-202ENST00000452448 HELZP42694 1942 aaKnown RBP4.09□□□□□ -1.76
EPHA3-202ENST00000452448 DENND4CQ5VZ89 1909 aa4.09□□□□□ -1.76
EPHA3-202ENST00000452448 K7ENP7 123 aa4.09□□□□□ -1.76
EPHA3-202ENST00000452448 HSPB6O14558 160 aa4.09□□□□□ -1.76
EPHA3-202ENST00000452448 RENP00797 406 aa4.09□□□□□ -1.76
EPHA3-202ENST00000452448 IGHMP01871 453 aa4.09□□□□□ -1.76
EPHA3-202ENST00000452448 ZNF286BP0CG31 522 aa4.09□□□□□ -1.76
EPHA3-202ENST00000452448 IGFBP3P17936 291 aaPredicted RBP4.09□□□□□ -1.76
EPHA3-202ENST00000452448 PFN2P35080 140 aa4.09□□□□□ -1.76
EPHA3-202ENST00000452448 CX3CL1P78423 397 aa4.09□□□□□ -1.76
EPHA3-202ENST00000452448 TAF10Q12962 218 aa4.09□□□□□ -1.76
EPHA3-202ENST00000452448 VAX1Q5SQQ9 334 aa4.09□□□□□ -1.76
EPHA3-202ENST00000452448 Q6ZS46 218 aa4.09□□□□□ -1.76
EPHA3-202ENST00000452448 CLDN19Q8N6F1 224 aa4.09□□□□□ -1.76
EPHA3-202ENST00000452448 CYB561D1Q8N8Q1 229 aa4.09□□□□□ -1.76
EPHA3-202ENST00000452448 STAG3L4Q8TBR4 150 aa4.09□□□□□ -1.76
EPHA3-202ENST00000452448 ADAT3Q96EY9 351 aaPredicted RBP4.09□□□□□ -1.76
EPHA3-202ENST00000452448 GABARAPL3Q9BY60 117 aa4.09□□□□□ -1.76
EPHA3-202ENST00000452448 HES7Q9BYE0 225 aa4.09□□□□□ -1.76
EPHA3-202ENST00000452448 FZR1Q9UM11 496 aa4.09□□□□□ -1.76
EPHA3-202ENST00000452448 DNAJC15Q9Y5T4 150 aa4.09□□□□□ -1.76
EPHA3-202ENST00000452448 COL4A4P53420 1690 aaPredicted RBP4.08□□□□□ -1.76
EPHA3-202ENST00000452448 MEIS3P1A6NDR6 274 aa4.08□□□□□ -1.76
EPHA3-202ENST00000452448 APOMO95445 188 aa4.08□□□□□ -1.76
EPHA3-202ENST00000452448 SRYQ05066 204 aa4.08□□□□□ -1.76
EPHA3-202ENST00000452448 CSRP2Q16527 193 aa4.08□□□□□ -1.76
EPHA3-202ENST00000452448 PQLC2Q6ZP29 291 aa4.08□□□□□ -1.76
EPHA3-202ENST00000452448 ZNF550Q7Z398 422 aa4.08□□□□□ -1.76
EPHA3-202ENST00000452448 COMMD6Q7Z4G1 85 aa4.08□□□□□ -1.76
EPHA3-202ENST00000452448 SPATA12Q7Z6I5 190 aa4.08□□□□□ -1.76
EPHA3-202ENST00000452448 SPACA3Q8IXA5 215 aa4.08□□□□□ -1.76
EPHA3-202ENST00000452448 ATOH7Q8N100 152 aa4.08□□□□□ -1.76
EPHA3-202ENST00000452448 TPRX1Q8N7U7 411 aa4.08□□□□□ -1.76
EPHA3-202ENST00000452448 OR10J6PQ8NGY7 276 aa4.08□□□□□ -1.76
EPHA3-202ENST00000452448 C2orf15Q8WU43 125 aaKnown RBP4.08□□□□□ -1.76
EPHA3-202ENST00000452448 BORCS7Q96B45 105 aa4.08□□□□□ -1.76
EPHA3-202ENST00000452448 PLEKHB2Q96CS7 222 aa4.08□□□□□ -1.76
EPHA3-202ENST00000452448 NEURL3Q96EH8 262 aa4.08□□□□□ -1.76
EPHA3-202ENST00000452448 PRELID3AQ96N28 172 aa4.08□□□□□ -1.76
EPHA3-202ENST00000452448 GPR21Q99679 349 aa4.08□□□□□ -1.76
EPHA3-202ENST00000452448 FOXC2Q99958 501 aa4.08□□□□□ -1.76
EPHA3-202ENST00000452448 VGLL1Q99990 258 aa4.08□□□□□ -1.76
EPHA3-202ENST00000452448 TM2D1Q9BX74 207 aa4.08□□□□□ -1.76
EPHA3-202ENST00000452448 OR10A2Q9H208 303 aa4.08□□□□□ -1.76
EPHA3-202ENST00000452448 TNFRSF12AQ9NP84 129 aa4.08□□□□□ -1.76
EPHA3-202ENST00000452448 NSG2Q9Y328 171 aa4.08□□□□□ -1.76
EPHA3-202ENST00000452448 PYGO1Q9Y3Y4 419 aa4.08□□□□□ -1.76
EPHA3-202ENST00000452448 SCN10AQ9Y5Y9 1956 aa4.08□□□□□ -1.76
EPHA3-202ENST00000452448 PDCD11Q14690 1871 aaKnown RBP4.08□□□□□ -1.76
EPHA3-202ENST00000452448 A0A0G2JK05 382 aa4.07□□□□□ -1.76
EPHA3-202ENST00000452448 TRDV1A0A1B0GX56 115 aa4.07□□□□□ -1.76
EPHA3-202ENST00000452448 SLC17A2O00624 439 aa4.07□□□□□ -1.76
EPHA3-202ENST00000452448 STC2O76061 302 aa4.07□□□□□ -1.76
EPHA3-202ENST00000452448 SNCGO76070 127 aa4.07□□□□□ -1.76
EPHA3-202ENST00000452448 TNFP01375 233 aa4.07□□□□□ -1.76
EPHA3-202ENST00000452448 P01737 135 aa4.07□□□□□ -1.76
EPHA3-202ENST00000452448 APOHP02749 345 aaPredicted RBP4.07□□□□□ -1.76
EPHA3-202ENST00000452448 FGF1P05230 155 aa4.07□□□□□ -1.76
EPHA3-202ENST00000452448 LGALS1P09382 135 aaKnown RBP4.07□□□□□ -1.76
EPHA3-202ENST00000452448 FGF6P10767 208 aa4.07□□□□□ -1.76
EPHA3-202ENST00000452448 IGLL1P15814 213 aa4.07□□□□□ -1.76
EPHA3-202ENST00000452448 CTGFP29279 349 aa4.07□□□□□ -1.76
EPHA3-202ENST00000452448 ZNF85Q03923 595 aa4.07□□□□□ -1.76
EPHA3-202ENST00000452448 SLC35E4Q6ICL7 350 aa4.07□□□□□ -1.76
EPHA3-202ENST00000452448 SLC25A34Q6PIV7 304 aa4.07□□□□□ -1.76
EPHA3-202ENST00000452448 TMEM14EPQ6UXP3 125 aa4.07□□□□□ -1.76
EPHA3-202ENST00000452448 LINC00482Q8N8I6 264 aa4.07□□□□□ -1.76
EPHA3-202ENST00000452448 OR4X2Q8NGF9 303 aa4.07□□□□□ -1.76
EPHA3-202ENST00000452448 OR10G8Q8NGN5 311 aa4.07□□□□□ -1.76
EPHA3-202ENST00000452448 FAM213BQ8TBF2 198 aa4.07□□□□□ -1.76
EPHA3-202ENST00000452448 SPRY4Q9C004 299 aa4.07□□□□□ -1.76
EPHA3-202ENST00000452448 CXCL16Q9H2A7 254 aa4.07□□□□□ -1.76
EPHA3-202ENST00000452448 RNF114Q9Y508 228 aa4.07□□□□□ -1.76
EPHA3-202ENST00000452448 KCNE3Q9Y6H6 103 aa4.07□□□□□ -1.76
EPHA3-202ENST00000452448 FNDC1Q4ZHG4 1894 aaPredicted RBP4.07□□□□□ -1.76
EPHA3-202ENST00000452448 TSC2P49815 1807 aa4.07□□□□□ -1.76
EPHA3-202ENST00000452448 TNRC18O15417 2968 aaPredicted RBP4.07□□□□□ -1.76
EPHA3-202ENST00000452448 TRAV5A0A0B4J249 113 aa4.07□□□□□ -1.76
EPHA3-202ENST00000452448 A0A0G2JNJ9 132 aa4.07□□□□□ -1.76
EPHA3-202ENST00000452448 TMEM150CB9EJG8 249 aa4.07□□□□□ -1.76
EPHA3-202ENST00000452448 C17orf112F2Z3M2 114 aa4.07□□□□□ -1.76
EPHA3-202ENST00000452448 CCL24O00175 119 aa4.07□□□□□ -1.76
EPHA3-202ENST00000452448 LMX1BO60663 402 aa4.07□□□□□ -1.76
EPHA3-202ENST00000452448 SERF1AO75920 110 aa4.07□□□□□ -1.76
EPHA3-202ENST00000452448 HLA-DRB1P01911 266 aa4.07□□□□□ -1.76
EPHA3-202ENST00000452448 HBE1P02100 147 aa4.07□□□□□ -1.76
EPHA3-202ENST00000452448 SRP19P09132 144 aaKnown RBP4.07□□□□□ -1.76
EPHA3-202ENST00000452448 DUTP33316 252 aaKnown RBP4.07□□□□□ -1.76
EPHA3-202ENST00000452448 ACVRL1P37023 503 aa4.07□□□□□ -1.76
EPHA3-202ENST00000452448 SLC25A48Q6ZT89 311 aaKnown RBP4.07□□□□□ -1.76
EPHA3-202ENST00000452448 OR11H6Q8NGC7 330 aa4.07□□□□□ -1.76
EPHA3-202ENST00000452448 OTOSQ8NHW6 89 aa4.07□□□□□ -1.76
EPHA3-202ENST00000452448 ZNF502Q8TBZ5 544 aa4.07□□□□□ -1.76
EPHA3-202ENST00000452448 SCGB1C1Q8TD33 95 aa4.07□□□□□ -1.76
EPHA3-202ENST00000452448 SLAMF8Q9P0V8 285 aa4.07□□□□□ -1.76
EPHA3-202ENST00000452448 Q9UFV3 132 aa4.07□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 48.2 ms