RNA–Protein interactions for RNA: ENST00000439806.6

CPNE1-218, Transcript of copine 1, humanhuman

TSL 5

Gene CPNE1, Length 748 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-218ENST00000439806 PDE6DO43924 150 aa8.49□□□□□ -1.05
CPNE1-218ENST00000439806 STAG3L2P0CL84 134 aa8.49□□□□□ -1.05
CPNE1-218ENST00000439806 STAG3L3P0CL85 134 aa8.49□□□□□ -1.05
CPNE1-218ENST00000439806 ARL14EPLP0DKL9 152 aa8.49□□□□□ -1.05
CPNE1-218ENST00000439806 RNASE2P10153 161 aaKnown RBP8.49□□□□□ -1.05
CPNE1-218ENST00000439806 IGFBP2P18065 325 aa8.49□□□□□ -1.05
CPNE1-218ENST00000439806 S100PP25815 95 aa8.49□□□□□ -1.05
CPNE1-218ENST00000439806 RPL29P47914 159 aaKnown RBP8.49□□□□□ -1.05
CPNE1-218ENST00000439806 DLX6P56179 175 aa8.49□□□□□ -1.05
CPNE1-218ENST00000439806 RPL23P62829 140 aaKnown RBP8.49□□□□□ -1.05
CPNE1-218ENST00000439806 RPL8P62917 257 aaKnown RBP8.49□□□□□ -1.05
CPNE1-218ENST00000439806 VMA21Q3ZAQ7 101 aa8.49□□□□□ -1.05
CPNE1-218ENST00000439806 STPG3Q8N7X2 389 aa8.49□□□□□ -1.05
CPNE1-218ENST00000439806 OR5AN1Q8NGI8 311 aa8.49□□□□□ -1.05
CPNE1-218ENST00000439806 OR4C13Q8NGP0 309 aa8.49□□□□□ -1.05
CPNE1-218ENST00000439806 TMEM167AQ8TBQ9 72 aa8.49□□□□□ -1.05
CPNE1-218ENST00000439806 OR5B12Q96R08 314 aa8.49□□□□□ -1.05
CPNE1-218ENST00000439806 TXNDC17Q9BRA2 123 aa8.49□□□□□ -1.05
CPNE1-218ENST00000439806 PCGF1Q9BSM1 259 aa8.49□□□□□ -1.05
CPNE1-218ENST00000439806 METTL1Q9UBP6 276 aaKnown RBP8.49□□□□□ -1.05
CPNE1-218ENST00000439806 LSM4Q9Y4Z0 139 aaKnown RBP8.49□□□□□ -1.05
CPNE1-218ENST00000439806 ARFGEF3Q5TH69 2177 aa8.48□□□□□ -1.05
CPNE1-218ENST00000439806 FREM2Q5SZK8 3169 aa8.48□□□□□ -1.05
CPNE1-218ENST00000439806 WDFY4Q6ZS81 3184 aa8.48□□□□□ -1.05
CPNE1-218ENST00000439806 A0A087X0M5 115 aa8.48□□□□□ -1.05
CPNE1-218ENST00000439806 A0A1B0GX30 115 aa8.48□□□□□ -1.05
CPNE1-218ENST00000439806 H7BYZ3 331 aa8.48□□□□□ -1.05
CPNE1-218ENST00000439806 S100A8P05109 93 aa8.48□□□□□ -1.05
CPNE1-218ENST00000439806 S100A9P06702 114 aaKnown RBP8.48□□□□□ -1.05
CPNE1-218ENST00000439806 IGHV1-8P0DP01 117 aa8.48□□□□□ -1.05
CPNE1-218ENST00000439806 GCHFRP30047 84 aa8.48□□□□□ -1.05
CPNE1-218ENST00000439806 ATP5G3P48201 142 aa8.48□□□□□ -1.05
CPNE1-218ENST00000439806 FABP9Q0Z7S8 132 aa8.48□□□□□ -1.05
CPNE1-218ENST00000439806 SPNS3Q6ZMD2 512 aa8.48□□□□□ -1.05
CPNE1-218ENST00000439806 TMEM144Q7Z5S9 345 aa8.48□□□□□ -1.05
CPNE1-218ENST00000439806 MUC15Q8N387 334 aa8.48□□□□□ -1.05
CPNE1-218ENST00000439806 SLC35E1Q96K37 410 aa8.48□□□□□ -1.05
CPNE1-218ENST00000439806 FAM210BQ96KR6 192 aa8.48□□□□□ -1.05
CPNE1-218ENST00000439806 TMEM133Q9H2Q1 129 aa8.48□□□□□ -1.05
CPNE1-218ENST00000439806 PLCE1Q9P212 2302 aa8.48□□□□□ -1.05
CPNE1-218ENST00000439806 ZNF98A6NK75 572 aa8.47□□□□□ -1.05
CPNE1-218ENST00000439806 ENSAO43768 121 aaKnown RBP8.47□□□□□ -1.05
CPNE1-218ENST00000439806 VENTXO95231 258 aa8.47□□□□□ -1.05
CPNE1-218ENST00000439806 OR10J1P30954 320 aa8.47□□□□□ -1.05
CPNE1-218ENST00000439806 MC5RP33032 325 aa8.47□□□□□ -1.05
CPNE1-218ENST00000439806 PPOXP50336 477 aa8.47□□□□□ -1.05
CPNE1-218ENST00000439806 ZNF137PP52743 207 aa8.47□□□□□ -1.05
CPNE1-218ENST00000439806 SUB1P53999 127 aaKnown RBP eCLIP8.47□□□□□ -1.05
CPNE1-218ENST00000439806 PRRX1P54821 245 aa8.47□□□□□ -1.05
CPNE1-218ENST00000439806 NDUFA6P56556 154 aa8.47□□□□□ -1.05
CPNE1-218ENST00000439806 CD69Q07108 199 aa8.47□□□□□ -1.05
CPNE1-218ENST00000439806 ZNF672Q499Z4 452 aaPredicted RBP8.47□□□□□ -1.05
CPNE1-218ENST00000439806 SLC16A13Q7RTY0 426 aa8.47□□□□□ -1.05
CPNE1-218ENST00000439806 MRPL41Q8IXM3 137 aaKnown RBP8.47□□□□□ -1.05
CPNE1-218ENST00000439806 OR5T1Q8NG75 326 aa8.47□□□□□ -1.05
CPNE1-218ENST00000439806 ABHD5Q8WTS1 349 aa8.47□□□□□ -1.05
CPNE1-218ENST00000439806 TNFRSF14Q92956 283 aa8.47□□□□□ -1.05
CPNE1-218ENST00000439806 ANAPC16Q96DE5 110 aa8.47□□□□□ -1.05
CPNE1-218ENST00000439806 C12orf57Q99622 126 aa8.47□□□□□ -1.05
CPNE1-218ENST00000439806 TCEAL7Q9BRU2 100 aa8.47□□□□□ -1.05
CPNE1-218ENST00000439806 RALYQ9UKM9 306 aaKnown RBP8.47□□□□□ -1.05
CPNE1-218ENST00000439806 LYNX1G3V0Z9 82 aa8.46□□□□□ -1.06
CPNE1-218ENST00000439806 CLN5O75503 358 aa8.46□□□□□ -1.06
CPNE1-218ENST00000439806 IGHV2-70P01814 119 aa8.46□□□□□ -1.06
CPNE1-218ENST00000439806 IGHV2-5P01817 119 aa8.46□□□□□ -1.06
CPNE1-218ENST00000439806 LYNX1P0DP58 116 aa8.46□□□□□ -1.06
CPNE1-218ENST00000439806 COL8A2P25067 703 aa8.46□□□□□ -1.06
CPNE1-218ENST00000439806 GRNP28799 593 aaKnown RBP8.46□□□□□ -1.06
CPNE1-218ENST00000439806 GALR1P47211 349 aa8.46□□□□□ -1.06
CPNE1-218ENST00000439806 MEOX2P50222 304 aa8.46□□□□□ -1.06
CPNE1-218ENST00000439806 GNB1P62873 340 aa8.46□□□□□ -1.06
CPNE1-218ENST00000439806 PRR20EP86478 221 aa8.46□□□□□ -1.06
CPNE1-218ENST00000439806 PRR20CP86479 221 aa8.46□□□□□ -1.06
CPNE1-218ENST00000439806 PRR20DP86480 221 aa8.46□□□□□ -1.06
CPNE1-218ENST00000439806 PRR20BP86481 221 aa8.46□□□□□ -1.06
CPNE1-218ENST00000439806 PRR20AP86496 221 aa8.46□□□□□ -1.06
CPNE1-218ENST00000439806 DIAPH2-AS1Q14236 149 aa8.46□□□□□ -1.06
CPNE1-218ENST00000439806 SPATA31B1PQ5VZV4 182 aa8.46□□□□□ -1.06
CPNE1-218ENST00000439806 NECAP1Q8NC96 275 aa8.46□□□□□ -1.06
CPNE1-218ENST00000439806 OR10W1Q8NGF6 305 aa8.46□□□□□ -1.06
CPNE1-218ENST00000439806 OR8B3Q8NGG8 313 aa8.46□□□□□ -1.06
CPNE1-218ENST00000439806 OR4P4Q8NGL7 312 aa8.46□□□□□ -1.06
CPNE1-218ENST00000439806 ST6GALNAC6Q969X2 333 aa8.46□□□□□ -1.06
CPNE1-218ENST00000439806 FAM122AQ96E09 287 aa8.46□□□□□ -1.06
CPNE1-218ENST00000439806 C1orf159Q96HA4 380 aa8.46□□□□□ -1.06
CPNE1-218ENST00000439806 UHRF2Q96PU4 802 aa8.46□□□□□ -1.06
CPNE1-218ENST00000439806 OR8B2Q96RD0 313 aa8.46□□□□□ -1.06
CPNE1-218ENST00000439806 SSX3Q99909 188 aa8.46□□□□□ -1.06
CPNE1-218ENST00000439806 NDUFA4L2Q9NRX3 87 aa8.46□□□□□ -1.06
CPNE1-218ENST00000439806 SLC45A2Q9UMX9 530 aa8.46□□□□□ -1.06
CPNE1-218ENST00000439806 AMMECR1Q9Y4X0 333 aaPredicted RBP8.46□□□□□ -1.06
CPNE1-218ENST00000439806 TRBV24-1A0A075B6N3 115 aa8.45□□□□□ -1.06
CPNE1-218ENST00000439806 MDFIC2A0A1B0GVS7 189 aa8.45□□□□□ -1.06
CPNE1-218ENST00000439806 PCP4L1A6NKN8 68 aa8.45□□□□□ -1.06
CPNE1-218ENST00000439806 INS-IGF2F8WCM5 200 aa8.45□□□□□ -1.06
CPNE1-218ENST00000439806 SLC25A17O43808 307 aa8.45□□□□□ -1.06
CPNE1-218ENST00000439806 ACTL6BO94805 426 aa8.45□□□□□ -1.06
CPNE1-218ENST00000439806 FSTL3O95633 263 aa8.45□□□□□ -1.06
CPNE1-218ENST00000439806 IGLV2-23P01705 113 aa8.45□□□□□ -1.06
CPNE1-218ENST00000439806 LINC00869P0C866 280 aa8.45□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 55.6 ms