RNA–Protein interactions for RNA: ENST00000439029.5

SMPD4-208, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 4

Gene SMPD4, Length 566 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-208ENST00000439029 PRELID3BQ9Y3B1 194 aa6.86□□□□□ -1.31
SMPD4-208ENST00000439029 IGHV3OR16-12A0A075B7B8 117 aa6.85□□□□□ -1.31
SMPD4-208ENST00000439029 TMEM14DPA8MWL7 114 aa6.85□□□□□ -1.31
SMPD4-208ENST00000439029 CTSGP08311 255 aa6.85□□□□□ -1.31
SMPD4-208ENST00000439029 OR13C7P0DN81 318 aa6.85□□□□□ -1.31
SMPD4-208ENST00000439029 FAM3BP58499 235 aaPredicted RBP6.85□□□□□ -1.31
SMPD4-208ENST00000439029 QRFPP83859 136 aa6.85□□□□□ -1.31
SMPD4-208ENST00000439029 SMN1Q16637 294 aaKnown RBP6.85□□□□□ -1.31
SMPD4-208ENST00000439029 VSTM2AQ8TAG5 236 aa6.85□□□□□ -1.31
SMPD4-208ENST00000439029 TCTEX1D2Q8WW35 142 aa6.85□□□□□ -1.31
SMPD4-208ENST00000439029 C17orf77Q96MU5 243 aa6.85□□□□□ -1.31
SMPD4-208ENST00000439029 NIPSNAP3BQ9BS92 247 aa6.85□□□□□ -1.31
SMPD4-208ENST00000439029 CABLES2Q9BTV7 478 aa6.85□□□□□ -1.31
SMPD4-208ENST00000439029 KRTAP1-5Q9BYS1 174 aa6.85□□□□□ -1.31
SMPD4-208ENST00000439029 ARGLU1Q9NWB6 273 aaPredicted RBP6.85□□□□□ -1.31
SMPD4-208ENST00000439029 SPATA2Q9UM82 520 aa6.85□□□□□ -1.31
SMPD4-208ENST00000439029 RPS10-NUDT3A0A1W2PQS6 291 aa6.84□□□□□ -1.31
SMPD4-208ENST00000439029 FOXI3A8MTJ6 420 aaPredicted RBP6.84□□□□□ -1.31
SMPD4-208ENST00000439029 NUDT3O95989 172 aa6.84□□□□□ -1.31
SMPD4-208ENST00000439029 IGHV3-48P01763 117 aa6.84□□□□□ -1.31
SMPD4-208ENST00000439029 BRWD1-AS2P59051 145 aa6.84□□□□□ -1.31
SMPD4-208ENST00000439029 PLAC9Q5JTB6 97 aa6.84□□□□□ -1.31
SMPD4-208ENST00000439029 H1FOOQ8IZA3 346 aaPredicted RBP6.84□□□□□ -1.31
SMPD4-208ENST00000439029 SYT8Q8NBV8 401 aa6.84□□□□□ -1.31
SMPD4-208ENST00000439029 STXBP6Q8NFX7 210 aa6.84□□□□□ -1.31
SMPD4-208ENST00000439029 OR4S2Q8NH73 311 aa6.84□□□□□ -1.31
SMPD4-208ENST00000439029 DGCR14Q96DF8 476 aaKnown RBP6.84□□□□□ -1.31
SMPD4-208ENST00000439029 DKK2Q9UBU2 259 aa6.84□□□□□ -1.31
SMPD4-208ENST00000439029 PLA2G2DQ9UNK4 145 aa6.84□□□□□ -1.31
SMPD4-208ENST00000439029 RBMX2Q9Y388 322 aaKnown RBP6.84□□□□□ -1.31
SMPD4-208ENST00000439029 IGKV1D-8A0A087WSZ0 117 aa6.83□□□□□ -1.32
SMPD4-208ENST00000439029 K7EIM0 57 aa6.83□□□□□ -1.32
SMPD4-208ENST00000439029 EIF4EP06730 217 aaKnown RBP6.83□□□□□ -1.32
SMPD4-208ENST00000439029 FCGR3AP08637 254 aa6.83□□□□□ -1.32
SMPD4-208ENST00000439029 CD37P11049 281 aa6.83□□□□□ -1.32
SMPD4-208ENST00000439029 FXYD7P58549 80 aa6.83□□□□□ -1.32
SMPD4-208ENST00000439029 KRTAP10-1P60331 282 aa6.83□□□□□ -1.32
SMPD4-208ENST00000439029 WT1-ASQ06250 92 aa6.83□□□□□ -1.32
SMPD4-208ENST00000439029 C1orf100Q5SVJ3 147 aa6.83□□□□□ -1.32
SMPD4-208ENST00000439029 SERTAD4-AS1Q5TG53 156 aa6.83□□□□□ -1.32
SMPD4-208ENST00000439029 Q6ZSN1 163 aa6.83□□□□□ -1.32
SMPD4-208ENST00000439029 LRRTM1Q86UE6 522 aa6.83□□□□□ -1.32
SMPD4-208ENST00000439029 GDPD1Q8N9F7 314 aa6.83□□□□□ -1.32
SMPD4-208ENST00000439029 DUSP18Q8NEJ0 188 aa6.83□□□□□ -1.32
SMPD4-208ENST00000439029 RHOXF1Q8NHV9 184 aa6.83□□□□□ -1.32
SMPD4-208ENST00000439029 APH1BQ8WW43 257 aa6.83□□□□□ -1.32
SMPD4-208ENST00000439029 OR10C1Q96KK4 312 aa6.83□□□□□ -1.32
SMPD4-208ENST00000439029 Q96MT0 163 aa6.83□□□□□ -1.32
SMPD4-208ENST00000439029 SRSF8Q9BRL6 282 aaKnown RBP6.83□□□□□ -1.32
SMPD4-208ENST00000439029 URM1Q9BTM9 101 aaKnown RBP6.83□□□□□ -1.32
SMPD4-208ENST00000439029 HINT2Q9BX68 163 aa6.83□□□□□ -1.32
SMPD4-208ENST00000439029 FGF20Q9NP95 211 aaPredicted RBP6.83□□□□□ -1.32
SMPD4-208ENST00000439029 ZNF446Q9NWS9 450 aa6.83□□□□□ -1.32
SMPD4-208ENST00000439029 TAS2R8Q9NYW2 309 aa6.83□□□□□ -1.32
SMPD4-208ENST00000439029 HSF4Q9ULV5 492 aa6.83□□□□□ -1.32
SMPD4-208ENST00000439029 LINC00588Q9Y4M8 146 aa6.83□□□□□ -1.32
SMPD4-208ENST00000439029 AP4S1Q9Y587 144 aa6.83□□□□□ -1.32
SMPD4-208ENST00000439029 A0A075B6Q4 140 aa6.82□□□□□ -1.32
SMPD4-208ENST00000439029 FAM229AH3BQW9 127 aa6.82□□□□□ -1.32
SMPD4-208ENST00000439029 EI24O14681 340 aa6.82□□□□□ -1.32
SMPD4-208ENST00000439029 IGLV2-14P01704 120 aa6.82□□□□□ -1.32
SMPD4-208ENST00000439029 NFYAP23511 347 aaPredicted RBP6.82□□□□□ -1.32
SMPD4-208ENST00000439029 TAS2R43P59537 309 aa6.82□□□□□ -1.32
SMPD4-208ENST00000439029 MRPS15P82914 257 aaKnown RBP6.82□□□□□ -1.32
SMPD4-208ENST00000439029 RELQ04864 619 aaPredicted RBP6.82□□□□□ -1.32
SMPD4-208ENST00000439029 TIMM50Q3ZCQ8 353 aa6.82□□□□□ -1.32
SMPD4-208ENST00000439029 RBM48Q5RL73 367 aaKnown RBP6.82□□□□□ -1.32
SMPD4-208ENST00000439029 FAM89BQ8N5H3 189 aa6.82□□□□□ -1.32
SMPD4-208ENST00000439029 C15orf53Q8NAA6 179 aa6.82□□□□□ -1.32
SMPD4-208ENST00000439029 RAB40CQ96S21 281 aa6.82□□□□□ -1.32
SMPD4-208ENST00000439029 COMMD5Q9GZQ3 224 aa6.82□□□□□ -1.32
SMPD4-208ENST00000439029 MRPS18AQ9NVS2 196 aaKnown RBP6.82□□□□□ -1.32
SMPD4-208ENST00000439029 PTTG2Q9NZH5 202 aa6.82□□□□□ -1.32
SMPD4-208ENST00000439029 KCNK7Q9Y2U2 307 aa6.82□□□□□ -1.32
SMPD4-208ENST00000439029 ORC6Q9Y5N6 252 aa6.82□□□□□ -1.32
SMPD4-208ENST00000439029 IGKV1D-13A0A0B4J2D9 117 aa6.81□□□□□ -1.32
SMPD4-208ENST00000439029 K7EQG2 157 aa6.81□□□□□ -1.32
SMPD4-208ENST00000439029 GYG2O15488 501 aa6.81□□□□□ -1.32
SMPD4-208ENST00000439029 CYB5BO43169 146 aa6.81□□□□□ -1.32
SMPD4-208ENST00000439029 TNFSF12O43508 249 aa6.81□□□□□ -1.32
SMPD4-208ENST00000439029 BPNT1O95861 308 aa6.81□□□□□ -1.32
SMPD4-208ENST00000439029 HRASP01112 189 aa6.81□□□□□ -1.32
SMPD4-208ENST00000439029 ALPLP05186 524 aa6.81□□□□□ -1.32
SMPD4-208ENST00000439029 SERPINE2P07093 398 aa6.81□□□□□ -1.32
SMPD4-208ENST00000439029 IGKV1-13P0DP09 117 aa6.81□□□□□ -1.32
SMPD4-208ENST00000439029 CD36P16671 472 aa6.81□□□□□ -1.32
SMPD4-208ENST00000439029 PSMG4Q5JS54 123 aa6.81□□□□□ -1.32
SMPD4-208ENST00000439029 TTC23Q5W5X9 447 aa6.81□□□□□ -1.32
SMPD4-208ENST00000439029 TOMM20LQ6UXN7 152 aa6.81□□□□□ -1.32
SMPD4-208ENST00000439029 GSG1LQ6UXU4 331 aa6.81□□□□□ -1.32
SMPD4-208ENST00000439029 QTRT1Q9BXR0 403 aaKnown RBP6.81□□□□□ -1.32
SMPD4-208ENST00000439029 VSIRQ9H7M9 311 aa6.81□□□□□ -1.32
SMPD4-208ENST00000439029 BET1LQ9NYM9 111 aa6.81□□□□□ -1.32
SMPD4-208ENST00000439029 TRAV2A0A0B4J234 112 aa6.8□□□□□ -1.32
SMPD4-208ENST00000439029 TMEM189A5PLL7 270 aa6.8□□□□□ -1.32
SMPD4-208ENST00000439029 UPK2O00526 184 aa6.8□□□□□ -1.32
SMPD4-208ENST00000439029 IGKV3-20P01619 116 aa6.8□□□□□ -1.32
SMPD4-208ENST00000439029 TRAPPC2P0DI81 140 aa6.8□□□□□ -1.32
SMPD4-208ENST00000439029 TRAPPC2BP0DI82 140 aa6.8□□□□□ -1.32
SMPD4-208ENST00000439029 MYL12AP19105 171 aa6.8□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 144.7 ms