RNA–Protein interactions for RNA: ENST00000436724.5

PTPRF-207, Transcript of protein tyrosine phosphatase, receptor type F, humanhuman

TSL 1 (best)

Gene PTPRF, Length 2,168 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRF-207ENST00000436724 MOB3BQ86TA1 216 aa17.05■□□□□ 0.32
PTPRF-207ENST00000436724 THNSL2Q86YJ6 484 aa17.05■□□□□ 0.32
PTPRF-207ENST00000436724 RSG1Q9BU20 258 aa17.05■□□□□ 0.32
PTPRF-207ENST00000436724 CSMD1Q96PZ7 3565 aa17.05■□□□□ 0.32
PTPRF-207ENST00000436724 UBE2L5PA0A1B0GUS4 154 aa17.04■□□□□ 0.32
PTPRF-207ENST00000436724 RBFOX3A6NFN3 312 aa17.04■□□□□ 0.32
PTPRF-207ENST00000436724 RRHO14718 337 aa17.04■□□□□ 0.32
PTPRF-207ENST00000436724 KBTBD11O94819 623 aa17.04■□□□□ 0.32
PTPRF-207ENST00000436724 IGLV2-23P01705 113 aa17.04■□□□□ 0.32
PTPRF-207ENST00000436724 PRTN3P24158 256 aa17.04■□□□□ 0.32
PTPRF-207ENST00000436724 RPL35P42766 123 aaKnown RBP17.04■□□□□ 0.32
PTPRF-207ENST00000436724 PDLIM4P50479 330 aa17.04■□□□□ 0.32
PTPRF-207ENST00000436724 RPEQ96AT9 228 aa17.04■□□□□ 0.32
PTPRF-207ENST00000436724 HIPK2Q9H2X6 1198 aa17.04■□□□□ 0.32
PTPRF-207ENST00000436724 PRNDQ9UKY0 176 aa17.04■□□□□ 0.32
PTPRF-207ENST00000436724 LY6LH3BQJ8 138 aa17.04■□□□□ 0.32
PTPRF-207ENST00000436724 MC5RP33032 325 aa17.04■□□□□ 0.32
PTPRF-207ENST00000436724 PAX2Q02962 417 aa17.04■□□□□ 0.32
PTPRF-207ENST00000436724 VMO1Q7Z5L0 202 aa17.04■□□□□ 0.32
PTPRF-207ENST00000436724 OR10P1Q8NGE3 313 aa17.04■□□□□ 0.32
PTPRF-207ENST00000436724 TMEM170AQ8WVE7 144 aa17.04■□□□□ 0.32
PTPRF-207ENST00000436724 SMDT1Q9H4I9 107 aa17.04■□□□□ 0.32
PTPRF-207ENST00000436724 ATP5J2P56134 94 aa17.03■□□□□ 0.32
PTPRF-207ENST00000436724 LHFPL4Q7Z7J7 247 aa17.03■□□□□ 0.32
PTPRF-207ENST00000436724 OR11H6Q8NGC7 330 aa17.03■□□□□ 0.32
PTPRF-207ENST00000436724 ISOC2Q96AB3 205 aa17.03■□□□□ 0.32
PTPRF-207ENST00000436724 LPAR2Q9HBW0 351 aa17.03■□□□□ 0.32
PTPRF-207ENST00000436724 TPSG1Q9NRR2 321 aa17.03■□□□□ 0.32
PTPRF-207ENST00000436724 PLXNB1O43157 2135 aa17.03■□□□□ 0.32
PTPRF-207ENST00000436724 USP9YO00507 2555 aaPredicted RBP17.02■□□□□ 0.32
PTPRF-207ENST00000436724 TEX50A0A1B0GTY4 177 aa17.02■□□□□ 0.32
PTPRF-207ENST00000436724 COX6B1P14854 86 aa17.02■□□□□ 0.32
PTPRF-207ENST00000436724 AKR1D1P51857 326 aa17.02■□□□□ 0.32
PTPRF-207ENST00000436724 AMMECR1Q9Y4X0 333 aaPredicted RBP17.02■□□□□ 0.32
PTPRF-207ENST00000436724 HILPDAQ9Y5L2 63 aa17.02■□□□□ 0.32
PTPRF-207ENST00000436724 CELSR1Q9NYQ6 3014 aa17.02■□□□□ 0.32
PTPRF-207ENST00000436724 SLC25A17O43808 307 aa17.02■□□□□ 0.31
PTPRF-207ENST00000436724 CNTFRP26992 372 aa17.02■□□□□ 0.31
PTPRF-207ENST00000436724 COL8A1P27658 744 aa17.02■□□□□ 0.31
PTPRF-207ENST00000436724 RNF212Q495C1 297 aa17.02■□□□□ 0.31
PTPRF-207ENST00000436724 FAM168AQ92567 244 aa17.02■□□□□ 0.31
PTPRF-207ENST00000436724 PERPQ96FX8 193 aa17.02■□□□□ 0.31
PTPRF-207ENST00000436724 POLQO75417 2590 aa17.01■□□□□ 0.31
PTPRF-207ENST00000436724 BTBD17A6NE02 478 aa17.01■□□□□ 0.31
PTPRF-207ENST00000436724 E7EUB6 86 aa17.01■□□□□ 0.31
PTPRF-207ENST00000436724 MT-ND4LP03901 98 aa17.01■□□□□ 0.31
PTPRF-207ENST00000436724 HTR1DP28221 377 aa17.01■□□□□ 0.31
PTPRF-207ENST00000436724 LRRC75BQ2VPJ9 315 aa17.01■□□□□ 0.31
PTPRF-207ENST00000436724 SCGB1C1Q8TD33 95 aa17.01■□□□□ 0.31
PTPRF-207ENST00000436724 WDR61Q9GZS3 305 aaKnown RBP17.01■□□□□ 0.31
PTPRF-207ENST00000436724 KIAA1456Q9P272 454 aa17.01■□□□□ 0.31
PTPRF-207ENST00000436724 ABCA2Q9BZC7 2435 aa17.01■□□□□ 0.31
PTPRF-207ENST00000436724 TENM4Q6N022 2769 aa17.01■□□□□ 0.31
PTPRF-207ENST00000436724 A0A1W2PPI3 338 aa17.01■□□□□ 0.31
PTPRF-207ENST00000436724 RPL8P62917 257 aaKnown RBP17.01■□□□□ 0.31
PTPRF-207ENST00000436724 SOHLH1Q5JUK2 328 aa17.01■□□□□ 0.31
PTPRF-207ENST00000436724 ZNF257Q9Y2Q1 563 aa17.01■□□□□ 0.31
PTPRF-207ENST00000436724 IGHV2-70DA0A0C4DH43 119 aa17■□□□□ 0.31
PTPRF-207ENST00000436724 SRP19P09132 144 aaKnown RBP17■□□□□ 0.31
PTPRF-207ENST00000436724 C10orf55Q5SWW7 151 aa17■□□□□ 0.31
PTPRF-207ENST00000436724 AKR1C8PQ5T2L2 129 aa17■□□□□ 0.31
PTPRF-207ENST00000436724 OR10W1Q8NGF6 305 aa17■□□□□ 0.31
PTPRF-207ENST00000436724 PINX1Q96BK5 328 aaKnown RBP17■□□□□ 0.31
PTPRF-207ENST00000436724 IGHV4-61A0A0C4DH41 118 aa16.99■□□□□ 0.31
PTPRF-207ENST00000436724 ODF3BA8MYP8 253 aa16.99■□□□□ 0.31
PTPRF-207ENST00000436724 OR8U8P0C7N1 319 aa16.99■□□□□ 0.31
PTPRF-207ENST00000436724 PRCDQ00LT1 54 aa16.99■□□□□ 0.31
PTPRF-207ENST00000436724 RHEBQ15382 184 aa16.99■□□□□ 0.31
PTPRF-207ENST00000436724 HAGHQ16775 308 aa16.99■□□□□ 0.31
PTPRF-207ENST00000436724 TPTE2P1Q5T6R2 138 aa16.99■□□□□ 0.31
PTPRF-207ENST00000436724 C1orf122Q6ZSJ8 110 aa16.99■□□□□ 0.31
PTPRF-207ENST00000436724 TMEM167AQ8TBQ9 72 aa16.99■□□□□ 0.31
PTPRF-207ENST00000436724 SFT2D1Q8WV19 159 aa16.99■□□□□ 0.31
PTPRF-207ENST00000436724 SIRPDQ9H106 197 aa16.99■□□□□ 0.31
PTPRF-207ENST00000436724 ZNF430Q9H8G1 570 aaPredicted RBP16.99■□□□□ 0.31
PTPRF-207ENST00000436724 ENY2Q9NPA8 101 aa16.99■□□□□ 0.31
PTPRF-207ENST00000436724 DPM3Q9P2X0 92 aa16.99■□□□□ 0.31
PTPRF-207ENST00000436724 ZNF98A6NK75 572 aa16.99■□□□□ 0.31
PTPRF-207ENST00000436724 TIMM23O14925 209 aa16.99■□□□□ 0.31
PTPRF-207ENST00000436724 HOXB4P17483 251 aaPredicted RBP16.99■□□□□ 0.31
PTPRF-207ENST00000436724 USF1P22415 310 aaPredicted RBP16.99■□□□□ 0.31
PTPRF-207ENST00000436724 RAB5BP61020 215 aa16.99■□□□□ 0.31
PTPRF-207ENST00000436724 KIR3DL3Q8N743 410 aa16.99■□□□□ 0.31
PTPRF-207ENST00000436724 C10orf105Q8TEF2 133 aa16.99■□□□□ 0.31
PTPRF-207ENST00000436724 TAF15Q92804 592 aaKnown RBP eCLIP16.99■□□□□ 0.31
PTPRF-207ENST00000436724 PIMREGQ9BSJ6 248 aa16.99■□□□□ 0.31
PTPRF-207ENST00000436724 COMMD5Q9GZQ3 224 aa16.99■□□□□ 0.31
PTPRF-207ENST00000436724 PLEKHA3Q9HB20 300 aa16.99■□□□□ 0.31
PTPRF-207ENST00000436724 PUS1Q9Y606 427 aaKnown RBP eCLIP16.99■□□□□ 0.31
PTPRF-207ENST00000436724 C1orf196B1AJZ1 125 aa16.98■□□□□ 0.31
PTPRF-207ENST00000436724 ICAM4Q14773 271 aa16.98■□□□□ 0.31
PTPRF-207ENST00000436724 SLC24A4Q8NFF2 622 aa16.98■□□□□ 0.31
PTPRF-207ENST00000436724 VSTM2AQ8TAG5 236 aa16.98■□□□□ 0.31
PTPRF-207ENST00000436724 TMEM147Q9BVK8 224 aa16.98■□□□□ 0.31
PTPRF-207ENST00000436724 CA2P00918 260 aa16.98■□□□□ 0.31
PTPRF-207ENST00000436724 RPP30P78346 268 aaKnown RBP16.98■□□□□ 0.31
PTPRF-207ENST00000436724 MRGPRG-AS1Q2M3A8 158 aa16.98■□□□□ 0.31
PTPRF-207ENST00000436724 DPPA3Q6W0C5 159 aa16.98■□□□□ 0.31
PTPRF-207ENST00000436724 OR5B3Q8NH48 314 aa16.98■□□□□ 0.31
PTPRF-207ENST00000436724 UNKLQ9H9P5 680 aaKnown RBP16.98■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 215.4 ms