RNA–Protein interactions for RNA: ENST00000428894.1

HMGB3P5-201, Transcript of high mobility group box 3 pseudogene 5, humanhuman

BASIC

Gene HMGB3P5, Length 612 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P5-201ENST00000428894 TMEM241Q24JQ0 296 aa3.35□□□□□ -1.87
HMGB3P5-201ENST00000428894 C2orf83Q53S99 150 aa3.35□□□□□ -1.87
HMGB3P5-201ENST00000428894 MESTQ5EB52 335 aa3.35□□□□□ -1.87
HMGB3P5-201ENST00000428894 DMKNQ6E0U4 476 aaPredicted RBP3.35□□□□□ -1.87
HMGB3P5-201ENST00000428894 ASCL4Q6XD76 172 aa3.35□□□□□ -1.87
HMGB3P5-201ENST00000428894 SLC36A1Q7Z2H8 476 aa3.35□□□□□ -1.87
HMGB3P5-201ENST00000428894 CMC1Q7Z7K0 106 aa3.35□□□□□ -1.87
HMGB3P5-201ENST00000428894 FTMTQ8N4E7 242 aa3.35□□□□□ -1.87
HMGB3P5-201ENST00000428894 CBR4Q8N4T8 237 aa3.35□□□□□ -1.87
HMGB3P5-201ENST00000428894 TMEM86BQ8N661 226 aa3.35□□□□□ -1.87
HMGB3P5-201ENST00000428894 TMEM99Q8N816 258 aa3.35□□□□□ -1.87
HMGB3P5-201ENST00000428894 OR2Z1Q8NG97 314 aa3.35□□□□□ -1.87
HMGB3P5-201ENST00000428894 OR10AD1Q8NGE0 317 aa3.35□□□□□ -1.87
HMGB3P5-201ENST00000428894 OR52E2Q8NGJ4 325 aa3.35□□□□□ -1.87
HMGB3P5-201ENST00000428894 OR4D5Q8NGN0 318 aa3.35□□□□□ -1.87
HMGB3P5-201ENST00000428894 OR9G4Q8NGQ1 327 aa3.35□□□□□ -1.87
HMGB3P5-201ENST00000428894 OR13C8Q8NGS7 320 aa3.35□□□□□ -1.87
HMGB3P5-201ENST00000428894 C8orf46Q8TAG6 207 aa3.35□□□□□ -1.87
HMGB3P5-201ENST00000428894 GTSF1Q8WW33 167 aa3.35□□□□□ -1.87
HMGB3P5-201ENST00000428894 HIST1H2BAQ96A08 127 aa3.35□□□□□ -1.87
HMGB3P5-201ENST00000428894 SLC35E1Q96K37 410 aa3.35□□□□□ -1.87
HMGB3P5-201ENST00000428894 MS4A4EQ96PG1 132 aa3.35□□□□□ -1.87
HMGB3P5-201ENST00000428894 SIGMAR1Q99720 223 aa3.35□□□□□ -1.87
HMGB3P5-201ENST00000428894 MICU1Q9BPX6 476 aa3.35□□□□□ -1.87
HMGB3P5-201ENST00000428894 LINC00470Q9BZP3 86 aa3.35□□□□□ -1.87
HMGB3P5-201ENST00000428894 OR2J1Q9GZK6 312 aa3.35□□□□□ -1.87
HMGB3P5-201ENST00000428894 SRD5A3Q9H8P0 318 aa3.35□□□□□ -1.87
HMGB3P5-201ENST00000428894 NOX3Q9HBY0 568 aa3.35□□□□□ -1.87
HMGB3P5-201ENST00000428894 PCTPQ9UKL6 214 aa3.35□□□□□ -1.87
HMGB3P5-201ENST00000428894 ST3GAL6Q9Y274 331 aa3.35□□□□□ -1.87
HMGB3P5-201ENST00000428894 PIGLQ9Y2B2 252 aa3.35□□□□□ -1.87
HMGB3P5-201ENST00000428894 AK6Q9Y3D8 172 aaKnown RBP3.35□□□□□ -1.87
HMGB3P5-201ENST00000428894 INSIG2Q9Y5U4 225 aa3.35□□□□□ -1.87
HMGB3P5-201ENST00000428894 CDH10Q9Y6N8 788 aa3.35□□□□□ -1.87
HMGB3P5-201ENST00000428894 DSPPQ9NZW4 1301 aa3.35□□□□□ -1.87
HMGB3P5-201ENST00000428894 COL7A1Q02388 2944 aa3.35□□□□□ -1.87
HMGB3P5-201ENST00000428894 MEIKINA0A087WXM9 373 aa3.34□□□□□ -1.87
HMGB3P5-201ENST00000428894 IGHV2-70DA0A0C4DH43 119 aa3.34□□□□□ -1.87
HMGB3P5-201ENST00000428894 IGHV1-69-2A0A0G2JMI3 117 aa3.34□□□□□ -1.87
HMGB3P5-201ENST00000428894 A0A1B0GTI1 187 aa3.34□□□□□ -1.87
HMGB3P5-201ENST00000428894 TCRBV9S1A1TA0A576 114 aa3.34□□□□□ -1.87
HMGB3P5-201ENST00000428894 IGSF23A1L1A6 192 aa3.34□□□□□ -1.87
HMGB3P5-201ENST00000428894 PRORSD1PA6NEY8 169 aa3.34□□□□□ -1.87
HMGB3P5-201ENST00000428894 ZNF705GA8MUZ8 300 aaPredicted RBP3.34□□□□□ -1.87
HMGB3P5-201ENST00000428894 G3V4G9 280 aa3.34□□□□□ -1.87
HMGB3P5-201ENST00000428894 RPL36A-HNRNPH2H7BZ11 118 aa3.34□□□□□ -1.87
HMGB3P5-201ENST00000428894 CORTO00230 105 aa3.34□□□□□ -1.87
HMGB3P5-201ENST00000428894 MANBAO00462 879 aa3.34□□□□□ -1.87
HMGB3P5-201ENST00000428894 TRAF3IP2O43734 574 aaPredicted RBP3.34□□□□□ -1.87
HMGB3P5-201ENST00000428894 OR6A2O95222 327 aa3.34□□□□□ -1.87
HMGB3P5-201ENST00000428894 MPC2O95563 127 aa3.34□□□□□ -1.87
HMGB3P5-201ENST00000428894 IFNA1P01562 189 aa3.34□□□□□ -1.87
HMGB3P5-201ENST00000428894 IGHMP01871 453 aa3.34□□□□□ -1.87
HMGB3P5-201ENST00000428894 HMGN2P05204 90 aaKnown RBP3.34□□□□□ -1.87
HMGB3P5-201ENST00000428894 BCHEP06276 602 aa3.34□□□□□ -1.87
HMGB3P5-201ENST00000428894 OR9G9P0C7N8 305 aa3.34□□□□□ -1.87
HMGB3P5-201ENST00000428894 CELP19835 753 aa3.34□□□□□ -1.87
HMGB3P5-201ENST00000428894 RAB5AP20339 215 aa3.34□□□□□ -1.87
HMGB3P5-201ENST00000428894 KITLGP21583 273 aa3.34□□□□□ -1.87
HMGB3P5-201ENST00000428894 PSMB9P28065 219 aa3.34□□□□□ -1.87
HMGB3P5-201ENST00000428894 CAV2P51636 162 aa3.34□□□□□ -1.87
HMGB3P5-201ENST00000428894 CNN1P51911 297 aaKnown RBP3.34□□□□□ -1.87
HMGB3P5-201ENST00000428894 GNG3P63215 75 aa3.34□□□□□ -1.87
HMGB3P5-201ENST00000428894 MLLT11Q13015 90 aaPredicted RBP3.34□□□□□ -1.87
HMGB3P5-201ENST00000428894 GNMTQ14749 295 aa3.34□□□□□ -1.87
HMGB3P5-201ENST00000428894 JOSD1Q15040 202 aaPredicted RBP3.34□□□□□ -1.87
HMGB3P5-201ENST00000428894 MRPL23Q16540 153 aaKnown RBP3.34□□□□□ -1.87
HMGB3P5-201ENST00000428894 TMEM69Q5SWH9 247 aa3.34□□□□□ -1.87
HMGB3P5-201ENST00000428894 DCST2Q5T1A1 773 aa3.34□□□□□ -1.87
HMGB3P5-201ENST00000428894 KDM4DQ6B0I6 523 aa3.34□□□□□ -1.87
HMGB3P5-201ENST00000428894 FAHD1Q6P587 224 aa3.34□□□□□ -1.87
HMGB3P5-201ENST00000428894 TMPRSS11AQ6ZMR5 421 aa3.34□□□□□ -1.87
HMGB3P5-201ENST00000428894 ZNF621Q6ZSS3 439 aa3.34□□□□□ -1.87
HMGB3P5-201ENST00000428894 GTF2H5Q6ZYL4 71 aa3.34□□□□□ -1.87
HMGB3P5-201ENST00000428894 HIST2H3AQ71DI3 136 aa3.34□□□□□ -1.87
HMGB3P5-201ENST00000428894 OAFQ86UD1 273 aa3.34□□□□□ -1.87
HMGB3P5-201ENST00000428894 H1FOOQ8IZA3 346 aaPredicted RBP3.34□□□□□ -1.87
HMGB3P5-201ENST00000428894 ZNF555Q8NEP9 628 aa3.34□□□□□ -1.87
HMGB3P5-201ENST00000428894 DEFB108BQ8NET1 73 aa3.34□□□□□ -1.87
HMGB3P5-201ENST00000428894 OR1S1Q8NH92 325 aa3.34□□□□□ -1.87
HMGB3P5-201ENST00000428894 GPR148Q8TDV2 347 aa3.34□□□□□ -1.87
HMGB3P5-201ENST00000428894 CCL17Q92583 94 aa3.34□□□□□ -1.87
HMGB3P5-201ENST00000428894 GGHQ92820 318 aa3.34□□□□□ -1.87
HMGB3P5-201ENST00000428894 SLCO4A1Q96BD0 722 aa3.34□□□□□ -1.87
HMGB3P5-201ENST00000428894 SEH1LQ96EE3 360 aa3.34□□□□□ -1.87
HMGB3P5-201ENST00000428894 CENPNQ96H22 339 aaPredicted RBP3.34□□□□□ -1.87
HMGB3P5-201ENST00000428894 SLC35G5Q96KT7 338 aa3.34□□□□□ -1.87
HMGB3P5-201ENST00000428894 SDHCQ99643 169 aaPredicted RBP3.34□□□□□ -1.87
HMGB3P5-201ENST00000428894 NRIP2Q9BQI9 281 aa3.34□□□□□ -1.87
HMGB3P5-201ENST00000428894 TAPBPLQ9BX59 468 aa3.34□□□□□ -1.87
HMGB3P5-201ENST00000428894 EBPLQ9BY08 206 aa3.34□□□□□ -1.87
HMGB3P5-201ENST00000428894 SEC11CQ9BY50 192 aa3.34□□□□□ -1.87
HMGB3P5-201ENST00000428894 ACTR3CQ9C0K3 210 aaPredicted RBP3.34□□□□□ -1.87
HMGB3P5-201ENST00000428894 LYRM2Q9NU23 88 aaPredicted RBP3.34□□□□□ -1.87
HMGB3P5-201ENST00000428894 TAAR3PQ9P1P4 343 aa3.34□□□□□ -1.87
HMGB3P5-201ENST00000428894 UFC1Q9Y3C8 167 aa3.34□□□□□ -1.87
HMGB3P5-201ENST00000428894 TMED7-TICAM2A0A0A6YYA0 188 aa3.33□□□□□ -1.88
HMGB3P5-201ENST00000428894 TMEM269A0A1B0GVZ9 245 aa3.33□□□□□ -1.88
HMGB3P5-201ENST00000428894 SMIM9A6NGZ8 99 aa3.33□□□□□ -1.88
HMGB3P5-201ENST00000428894 COLCA2A8K830 154 aa3.33□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 46.7 ms