RNA–Protein interactions for RNA: ENST00000424270.6

SDCBP-203, Transcript of syndecan binding protein, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene SDCBP, Length 1,277 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-203ENST00000424270 GOLT1BQ9Y3E0 138 aa4.39□□□□□ -1.71
SDCBP-203ENST00000424270 GMPPBQ9Y5P6 360 aa4.39□□□□□ -1.71
SDCBP-203ENST00000424270 A0A087WTM6 91 aa4.38□□□□□ -1.71
SDCBP-203ENST00000424270 TRAV2A0A0B4J234 112 aa4.38□□□□□ -1.71
SDCBP-203ENST00000424270 RS1O15537 224 aa4.38□□□□□ -1.71
SDCBP-203ENST00000424270 DCTN3O75935 186 aa4.38□□□□□ -1.71
SDCBP-203ENST00000424270 KBTBD11O94819 623 aa4.38□□□□□ -1.71
SDCBP-203ENST00000424270 ZNF735P0CB33 412 aa4.38□□□□□ -1.71
SDCBP-203ENST00000424270 GBX2P52951 348 aaPredicted RBP4.38□□□□□ -1.71
SDCBP-203ENST00000424270 ARFRP1Q13795 201 aa4.38□□□□□ -1.71
SDCBP-203ENST00000424270 NFE4Q86UQ8 179 aa4.38□□□□□ -1.71
SDCBP-203ENST00000424270 CBR4Q8N4T8 237 aa4.38□□□□□ -1.71
SDCBP-203ENST00000424270 ZNF114Q8NC26 417 aa4.38□□□□□ -1.71
SDCBP-203ENST00000424270 GPR148Q8TDV2 347 aa4.38□□□□□ -1.71
SDCBP-203ENST00000424270 RNF141Q8WVD5 230 aa4.38□□□□□ -1.71
SDCBP-203ENST00000424270 RNF125Q96EQ8 232 aa4.38□□□□□ -1.71
SDCBP-203ENST00000424270 ZNF414Q96IQ9 312 aa4.38□□□□□ -1.71
SDCBP-203ENST00000424270 NEU1Q99519 415 aa4.38□□□□□ -1.71
SDCBP-203ENST00000424270 HRASLSQ9HDD0 168 aa4.38□□□□□ -1.71
SDCBP-203ENST00000424270 PLEKHJ1Q9NW61 149 aa4.38□□□□□ -1.71
SDCBP-203ENST00000424270 IMPAD1Q9NX62 359 aa4.38□□□□□ -1.71
SDCBP-203ENST00000424270 MGAT4AQ9UM21 535 aa4.38□□□□□ -1.71
SDCBP-203ENST00000424270 PRELID3BQ9Y3B1 194 aa4.38□□□□□ -1.71
SDCBP-203ENST00000424270 LINC00473A8K010 186 aa4.37□□□□□ -1.71
SDCBP-203ENST00000424270 E7EUB6 86 aa4.37□□□□□ -1.71
SDCBP-203ENST00000424270 ATP5G1P05496 136 aa4.37□□□□□ -1.71
SDCBP-203ENST00000424270 RAP2AP10114 183 aa4.37□□□□□ -1.71
SDCBP-203ENST00000424270 ATP5G3P48201 142 aa4.37□□□□□ -1.71
SDCBP-203ENST00000424270 ALDH3B2P48448 385 aa4.37□□□□□ -1.71
SDCBP-203ENST00000424270 EIF2B2P49770 351 aaKnown RBP4.37□□□□□ -1.71
SDCBP-203ENST00000424270 RPL8P62917 257 aaKnown RBP4.37□□□□□ -1.71
SDCBP-203ENST00000424270 MRPS15P82914 257 aaKnown RBP4.37□□□□□ -1.71
SDCBP-203ENST00000424270 OR5I1Q13606 314 aa4.37□□□□□ -1.71
SDCBP-203ENST00000424270 RCN1Q15293 331 aa4.37□□□□□ -1.71
SDCBP-203ENST00000424270 RRN3P1Q2M238 152 aa4.37□□□□□ -1.71
SDCBP-203ENST00000424270 FAM90A2PQ658T7 463 aa4.37□□□□□ -1.71
SDCBP-203ENST00000424270 SIGIRRQ6IA17 410 aa4.37□□□□□ -1.71
SDCBP-203ENST00000424270 KCTD9Q7L273 389 aa4.37□□□□□ -1.71
SDCBP-203ENST00000424270 DHFR2Q86XF0 187 aa4.37□□□□□ -1.71
SDCBP-203ENST00000424270 ZBTB34Q8NCN2 500 aa4.37□□□□□ -1.71
SDCBP-203ENST00000424270 OR10J5Q8NHC4 309 aa4.37□□□□□ -1.71
SDCBP-203ENST00000424270 DNAJC9Q8WXX5 260 aa4.37□□□□□ -1.71
SDCBP-203ENST00000424270 FCGR1BQ92637 280 aa4.37□□□□□ -1.71
SDCBP-203ENST00000424270 ORAI1Q96D31 301 aa4.37□□□□□ -1.71
SDCBP-203ENST00000424270 DGCR14Q96DF8 476 aaKnown RBP4.37□□□□□ -1.71
SDCBP-203ENST00000424270 NARS2Q96I59 477 aaKnown RBP4.37□□□□□ -1.71
SDCBP-203ENST00000424270 Q96M66 194 aa4.37□□□□□ -1.71
SDCBP-203ENST00000424270 RAB40CQ96S21 281 aa4.37□□□□□ -1.71
SDCBP-203ENST00000424270 KRTAP4-12Q9BQ66 201 aa4.37□□□□□ -1.71
SDCBP-203ENST00000424270 GINS4Q9BRT9 223 aa4.37□□□□□ -1.71
SDCBP-203ENST00000424270 COMMD5Q9GZQ3 224 aa4.37□□□□□ -1.71
SDCBP-203ENST00000424270 EXOGQ9Y2C4 368 aaKnown RBP4.37□□□□□ -1.71
SDCBP-203ENST00000424270 HELTA6NFD8 242 aa4.36□□□□□ -1.71
SDCBP-203ENST00000424270 ZNF705FA8MVS1 300 aaPredicted RBP4.36□□□□□ -1.71
SDCBP-203ENST00000424270 J3QRK9 145 aa4.36□□□□□ -1.71
SDCBP-203ENST00000424270 M0QYG6 137 aa4.36□□□□□ -1.71
SDCBP-203ENST00000424270 ZNF705DP0CH99 300 aaPredicted RBP4.36□□□□□ -1.71
SDCBP-203ENST00000424270 ZNF705BP0CI00 300 aaPredicted RBP4.36□□□□□ -1.71
SDCBP-203ENST00000424270 HLA-GP17693 338 aa4.36□□□□□ -1.71
SDCBP-203ENST00000424270 SERPINB10P48595 397 aa4.36□□□□□ -1.71
SDCBP-203ENST00000424270 SNRPD3P62318 126 aaKnown RBP4.36□□□□□ -1.71
SDCBP-203ENST00000424270 DHRS2Q13268 280 aa4.36□□□□□ -1.71
SDCBP-203ENST00000424270 IRF3Q14653 427 aa4.36□□□□□ -1.71
SDCBP-203ENST00000424270 ZNF705AQ6ZN79 300 aaPredicted RBP4.36□□□□□ -1.71
SDCBP-203ENST00000424270 LHFPL3Q86UP9 236 aa4.36□□□□□ -1.71
SDCBP-203ENST00000424270 ARHGAP24Q8N264 748 aa4.36□□□□□ -1.71
SDCBP-203ENST00000424270 ACBD7Q8N6N7 88 aa4.36□□□□□ -1.71
SDCBP-203ENST00000424270 OR4C16Q8NGL9 310 aa4.36□□□□□ -1.71
SDCBP-203ENST00000424270 OR8J1Q8NGP2 316 aa4.36□□□□□ -1.71
SDCBP-203ENST00000424270 GNPNAT1Q96EK6 184 aaPredicted RBP4.36□□□□□ -1.71
SDCBP-203ENST00000424270 GRAMD2BQ96HH9 432 aa4.36□□□□□ -1.71
SDCBP-203ENST00000424270 ATP6V1G3Q96LB4 118 aa4.36□□□□□ -1.71
SDCBP-203ENST00000424270 UQCC2Q9BRT2 126 aa4.36□□□□□ -1.71
SDCBP-203ENST00000424270 HDHD3Q9BSH5 251 aaPredicted RBP4.36□□□□□ -1.71
SDCBP-203ENST00000424270 HINT2Q9BX68 163 aa4.36□□□□□ -1.71
SDCBP-203ENST00000424270 A0A1W2PS18 150 aa4.35□□□□□ -1.71
SDCBP-203ENST00000424270 NPIPB6E9PJ23 425 aa4.35□□□□□ -1.71
SDCBP-203ENST00000424270 K7EQG2 157 aa4.35□□□□□ -1.71
SDCBP-203ENST00000424270 PSCAO43653 123 aa4.35□□□□□ -1.71
SDCBP-203ENST00000424270 GNG7O60262 68 aa4.35□□□□□ -1.71
SDCBP-203ENST00000424270 NAPSAO96009 420 aa4.35□□□□□ -1.71
SDCBP-203ENST00000424270 APOHP02749 345 aaPredicted RBP4.35□□□□□ -1.71
SDCBP-203ENST00000424270 CD3GP09693 182 aa4.35□□□□□ -1.71
SDCBP-203ENST00000424270 OR13C7P0DN81 318 aa4.35□□□□□ -1.71
SDCBP-203ENST00000424270 NAT1P18440 290 aa4.35□□□□□ -1.71
SDCBP-203ENST00000424270 DUTP33316 252 aaKnown RBP4.35□□□□□ -1.71
SDCBP-203ENST00000424270 MRPL28Q13084 256 aaKnown RBP4.35□□□□□ -1.71
SDCBP-203ENST00000424270 TMED1Q13445 227 aa4.35□□□□□ -1.71
SDCBP-203ENST00000424270 LCE3BQ5TA77 95 aa4.35□□□□□ -1.71
SDCBP-203ENST00000424270 OGFRL1Q5TC84 451 aaPredicted RBP4.35□□□□□ -1.71
SDCBP-203ENST00000424270 C12orf73Q69YU5 71 aa4.35□□□□□ -1.71
SDCBP-203ENST00000424270 Q6ZRN7 208 aaPredicted RBP4.35□□□□□ -1.71
SDCBP-203ENST00000424270 DEFB107AQ8IZN7 70 aa4.35□□□□□ -1.71
SDCBP-203ENST00000424270 OR4S2Q8NH73 311 aa4.35□□□□□ -1.71
SDCBP-203ENST00000424270 TMEM167AQ8TBQ9 72 aa4.35□□□□□ -1.71
SDCBP-203ENST00000424270 SCARB1Q8WTV0 552 aa4.35□□□□□ -1.71
SDCBP-203ENST00000424270 TCTEX1D2Q8WW35 142 aa4.35□□□□□ -1.71
SDCBP-203ENST00000424270 GLMPQ8WWB7 406 aa4.35□□□□□ -1.71
SDCBP-203ENST00000424270 MOB3AQ96BX8 217 aa4.35□□□□□ -1.71
SDCBP-203ENST00000424270 TM2D1Q9BX74 207 aa4.35□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 109 ms