RNA–Protein interactions for RNA: ENST00000424011.6

CMTM3-202, Transcript of CKLF like MARVEL transmembrane domain containing 3, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CMTM3, Length 2,330 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3-202ENST00000424011 OPN1MW3P0DN78 364 aa13.59□□□□□ -0.23
CMTM3-202ENST00000424011 SP5Q6BEB4 398 aaPredicted RBP13.59□□□□□ -0.23
CMTM3-202ENST00000424011 ZNF439Q8NDP4 499 aa13.59□□□□□ -0.23
CMTM3-202ENST00000424011 OR4S2Q8NH73 311 aa13.59□□□□□ -0.23
CMTM3-202ENST00000424011 TMEM18Q96B42 140 aa13.59□□□□□ -0.23
CMTM3-202ENST00000424011 ZNF714Q96N38 554 aa13.59□□□□□ -0.23
CMTM3-202ENST00000424011 TMEM204Q9BSN7 226 aa13.59□□□□□ -0.23
CMTM3-202ENST00000424011 USP24Q9UPU5 2620 aa13.59□□□□□ -0.23
CMTM3-202ENST00000424011 DIDO1Q9BTC0 2240 aaKnown RBP13.58□□□□□ -0.23
CMTM3-202ENST00000424011 MDKP21741 143 aaPredicted RBP13.58□□□□□ -0.23
CMTM3-202ENST00000424011 RBX1P62877 108 aa13.58□□□□□ -0.23
CMTM3-202ENST00000424011 PNRC1Q12796 327 aaPredicted RBP13.58□□□□□ -0.23
CMTM3-202ENST00000424011 LEAP2Q969E1 77 aa13.58□□□□□ -0.23
CMTM3-202ENST00000424011 USF3Q68DE3 2245 aa13.58□□□□□ -0.24
CMTM3-202ENST00000424011 SAA2-SAA4A0A096LPE2 208 aa13.58□□□□□ -0.24
CMTM3-202ENST00000424011 FSTL3O95633 263 aa13.58□□□□□ -0.24
CMTM3-202ENST00000424011 SAA2P0DJI9 122 aaPredicted RBP13.58□□□□□ -0.24
CMTM3-202ENST00000424011 PPOXP50336 477 aa13.58□□□□□ -0.24
CMTM3-202ENST00000424011 TLE4Q04727 773 aa13.58□□□□□ -0.24
CMTM3-202ENST00000424011 UTF1Q5T230 341 aa13.58□□□□□ -0.24
CMTM3-202ENST00000424011 SLC25A48Q6ZT89 311 aaKnown RBP13.58□□□□□ -0.24
CMTM3-202ENST00000424011 LYG1Q8N1E2 194 aa13.58□□□□□ -0.24
CMTM3-202ENST00000424011 SCGB1C1Q8TD33 95 aa13.58□□□□□ -0.24
CMTM3-202ENST00000424011 ACY3Q96HD9 319 aa13.58□□□□□ -0.24
CMTM3-202ENST00000424011 CACNA1BQ00975 2339 aa13.58□□□□□ -0.24
CMTM3-202ENST00000424011 YLPM1P49750 1951 aaKnown RBP13.57□□□□□ -0.24
CMTM3-202ENST00000424011 SIAH2O43255 324 aa13.57□□□□□ -0.24
CMTM3-202ENST00000424011 BRS3P32247 399 aa13.57□□□□□ -0.24
CMTM3-202ENST00000424011 UQCRFS1P47985 274 aa13.57□□□□□ -0.24
CMTM3-202ENST00000424011 PRAMEF5Q5TYX0 476 aa13.57□□□□□ -0.24
CMTM3-202ENST00000424011 TMEM14EPQ6UXP3 125 aa13.57□□□□□ -0.24
CMTM3-202ENST00000424011 DDB2Q92466 427 aa13.57□□□□□ -0.24
CMTM3-202ENST00000424011 POLR3KQ9Y2Y1 108 aaPredicted RBP13.57□□□□□ -0.24
CMTM3-202ENST00000424011 PPP5D1E7EU14 171 aa13.57□□□□□ -0.24
CMTM3-202ENST00000424011 ZG16O60844 167 aa13.57□□□□□ -0.24
CMTM3-202ENST00000424011 GNLYP22749 145 aa13.57□□□□□ -0.24
CMTM3-202ENST00000424011 TMEM200BQ69YZ2 307 aa13.57□□□□□ -0.24
CMTM3-202ENST00000424011 ZNF705AQ6ZN79 300 aaPredicted RBP13.57□□□□□ -0.24
CMTM3-202ENST00000424011 MRPL41Q8IXM3 137 aaKnown RBP13.57□□□□□ -0.24
CMTM3-202ENST00000424011 OR10G4Q8NGN3 311 aa13.57□□□□□ -0.24
CMTM3-202ENST00000424011 H1FXQ92522 213 aaKnown RBP13.57□□□□□ -0.24
CMTM3-202ENST00000424011 OR4C12Q96R67 309 aa13.57□□□□□ -0.24
CMTM3-202ENST00000424011 DSCAMO60469 2012 aa13.56□□□□□ -0.24
CMTM3-202ENST00000424011 TCF21O43680 179 aa13.56□□□□□ -0.24
CMTM3-202ENST00000424011 TFF3Q07654 80 aa13.56□□□□□ -0.24
CMTM3-202ENST00000424011 PMS2P11Q13670 270 aa13.56□□□□□ -0.24
CMTM3-202ENST00000424011 LRRC75BQ2VPJ9 315 aa13.56□□□□□ -0.24
CMTM3-202ENST00000424011 OR8G2PQ6IF36 304 aa13.56□□□□□ -0.24
CMTM3-202ENST00000424011 C22orf15Q8WYQ4 148 aa13.56□□□□□ -0.24
CMTM3-202ENST00000424011 ZDHHC16Q969W1 377 aa13.56□□□□□ -0.24
CMTM3-202ENST00000424011 VSIRQ9H7M9 311 aa13.56□□□□□ -0.24
CMTM3-202ENST00000424011 SLC38A11Q08AI6 406 aa13.56□□□□□ -0.24
CMTM3-202ENST00000424011 LYPD2Q6UXB3 125 aa13.56□□□□□ -0.24
CMTM3-202ENST00000424011 DPPA3Q6W0C5 159 aa13.56□□□□□ -0.24
CMTM3-202ENST00000424011 OR4A16Q8NH70 328 aa13.56□□□□□ -0.24
CMTM3-202ENST00000424011 CLDND2Q8NHS1 167 aa13.56□□□□□ -0.24
CMTM3-202ENST00000424011 IGSF10Q6WRI0 2623 aa13.56□□□□□ -0.24
CMTM3-202ENST00000424011 RAI1Q7Z5J4 1906 aaPredicted RBP13.55□□□□□ -0.24
CMTM3-202ENST00000424011 MMP23AO75900 390 aa13.55□□□□□ -0.24
CMTM3-202ENST00000424011 IL6RP08887 468 aaPredicted RBP13.55□□□□□ -0.24
CMTM3-202ENST00000424011 LOXP28300 417 aaPredicted RBP13.55□□□□□ -0.24
CMTM3-202ENST00000424011 SPINK9Q5DT21 86 aa13.55□□□□□ -0.24
CMTM3-202ENST00000424011 WDR61Q9GZS3 305 aaKnown RBP13.55□□□□□ -0.24
CMTM3-202ENST00000424011 RPRMQ9NS64 109 aa13.55□□□□□ -0.24
CMTM3-202ENST00000424011 CEBPZOSA8MTT3 80 aa13.55□□□□□ -0.24
CMTM3-202ENST00000424011 C1orf229Q6ZS94 237 aaPredicted RBP13.55□□□□□ -0.24
CMTM3-202ENST00000424011 OR52E5Q8NH55 327 aa13.55□□□□□ -0.24
CMTM3-202ENST00000424011 RBMXL1Q96E39 390 aaKnown RBP13.55□□□□□ -0.24
CMTM3-202ENST00000424011 PARD6GQ9BYG4 376 aaPredicted RBP13.55□□□□□ -0.24
CMTM3-202ENST00000424011 CTDSP1Q9GZU7 261 aa13.55□□□□□ -0.24
CMTM3-202ENST00000424011 FKBP11Q9NYL4 201 aa13.55□□□□□ -0.24
CMTM3-202ENST00000424011 SCGB1D1O95968 90 aa13.54□□□□□ -0.24
CMTM3-202ENST00000424011 ELLP55199 621 aaPredicted RBP13.54□□□□□ -0.24
CMTM3-202ENST00000424011 ATP6V1FQ16864 119 aa13.54□□□□□ -0.24
CMTM3-202ENST00000424011 PSMG3Q9BT73 122 aaPredicted RBP13.54□□□□□ -0.24
CMTM3-202ENST00000424011 RAB1BQ9H0U4 201 aa13.54□□□□□ -0.24
CMTM3-202ENST00000424011 HIPK2Q9H2X6 1198 aa13.54□□□□□ -0.24
CMTM3-202ENST00000424011 CTSZQ9UBR2 303 aa13.54□□□□□ -0.24
CMTM3-202ENST00000424011 ICE1Q9Y2F5 2266 aa13.54□□□□□ -0.24
CMTM3-202ENST00000424011 UBE2L5PA0A1B0GUS4 154 aa13.53□□□□□ -0.24
CMTM3-202ENST00000424011 PMS2P5A8MQ11 134 aa13.53□□□□□ -0.24
CMTM3-202ENST00000424011 OR9G9P0C7N8 305 aa13.53□□□□□ -0.24
CMTM3-202ENST00000424011 RPS16P62249 146 aaKnown RBP13.53□□□□□ -0.24
CMTM3-202ENST00000424011 RTL8BQ17RB0 113 aa13.53□□□□□ -0.24
CMTM3-202ENST00000424011 FAM90A2PQ658T7 463 aa13.53□□□□□ -0.24
CMTM3-202ENST00000424011 C8orf31Q8N9H6 132 aa13.53□□□□□ -0.24
CMTM3-202ENST00000424011 PINX1Q96BK5 328 aaKnown RBP13.53□□□□□ -0.24
CMTM3-202ENST00000424011 A0A1W2PPQ1 181 aa13.53□□□□□ -0.24
CMTM3-202ENST00000424011 HRASP01112 189 aa13.53□□□□□ -0.24
CMTM3-202ENST00000424011 CCL3L1P16619 93 aa13.53□□□□□ -0.24
CMTM3-202ENST00000424011 OR10J1P30954 320 aa13.53□□□□□ -0.24
CMTM3-202ENST00000424011 ZNF726P1Q15940 193 aa13.53□□□□□ -0.24
CMTM3-202ENST00000424011 PDLIM3Q53GG5 364 aaPredicted RBP13.53□□□□□ -0.24
CMTM3-202ENST00000424011 RNASE8Q8TDE3 154 aaKnown RBP13.53□□□□□ -0.24
CMTM3-202ENST00000424011 PYGO2Q9BRQ0 406 aa13.53□□□□□ -0.24
CMTM3-202ENST00000424011 QTRT1Q9BXR0 403 aaKnown RBP13.53□□□□□ -0.24
CMTM3-202ENST00000424011 ZFP30Q9Y2G7 519 aa13.53□□□□□ -0.24
CMTM3-202ENST00000424011 HIVEP3Q5T1R4 2406 aa13.53□□□□□ -0.24
CMTM3-202ENST00000424011 FCN3O75636 299 aa13.52□□□□□ -0.24
CMTM3-202ENST00000424011 OR5I1Q13606 314 aa13.52□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms