RNA–Protein interactions for RNA: ENST00000423161.3

SREBF1-206, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 3

Gene SREBF1, Length 1,058 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-206ENST00000423161 C8orf88P0DMB2 117 aa13.83□□□□□ -0.2
SREBF1-206ENST00000423161 PTBP1P26599 531 aaKnown RBP eCLIP13.83□□□□□ -0.2
SREBF1-206ENST00000423161 TGFBR1P36897 503 aa13.83□□□□□ -0.2
SREBF1-206ENST00000423161 KCTD21Q4G0X4 260 aa13.83□□□□□ -0.2
SREBF1-206ENST00000423161 ZNF585BQ52M93 769 aa13.83□□□□□ -0.2
SREBF1-206ENST00000423161 UBE2NLQ5JXB2 153 aa13.83□□□□□ -0.2
SREBF1-206ENST00000423161 THOC7Q6I9Y2 204 aaKnown RBP13.83□□□□□ -0.2
SREBF1-206ENST00000423161 CROCCP3Q8IVE0 287 aa13.83□□□□□ -0.2
SREBF1-206ENST00000423161 GDPD1Q8N9F7 314 aa13.83□□□□□ -0.2
SREBF1-206ENST00000423161 S100A16Q96FQ6 103 aaKnown RBP13.83□□□□□ -0.2
SREBF1-206ENST00000423161 GGTLC1Q9BX51 225 aa13.83□□□□□ -0.2
SREBF1-206ENST00000423161 MRPL27Q9P0M9 148 aaKnown RBP13.83□□□□□ -0.2
SREBF1-206ENST00000423161 UFC1Q9Y3C8 167 aa13.83□□□□□ -0.2
SREBF1-206ENST00000423161 TRAV25A0A0B4J276 109 aa13.82□□□□□ -0.2
SREBF1-206ENST00000423161 TGOLN2O43493 480 aa13.82□□□□□ -0.2
SREBF1-206ENST00000423161 OR13C7P0DN81 318 aa13.82□□□□□ -0.2
SREBF1-206ENST00000423161 RFX2P48378 723 aa13.82□□□□□ -0.2
SREBF1-206ENST00000423161 ELLP55199 621 aaPredicted RBP13.82□□□□□ -0.2
SREBF1-206ENST00000423161 DHRS11Q6UWP2 260 aa13.82□□□□□ -0.2
SREBF1-206ENST00000423161 RBPMS2Q6ZRY4 209 aaKnown RBP13.82□□□□□ -0.2
SREBF1-206ENST00000423161 HSD17B13Q7Z5P4 300 aaPredicted RBP13.82□□□□□ -0.2
SREBF1-206ENST00000423161 OR1L8Q8NGR8 309 aa13.82□□□□□ -0.2
SREBF1-206ENST00000423161 VN1R17PQ8TDU5 208 aa13.82□□□□□ -0.2
SREBF1-206ENST00000423161 MOB3AQ96BX8 217 aa13.82□□□□□ -0.2
SREBF1-206ENST00000423161 ZNF2Q9BSG1 426 aaPredicted RBP13.82□□□□□ -0.2
SREBF1-206ENST00000423161 ZNF436Q9C0F3 470 aaPredicted RBP13.82□□□□□ -0.2
SREBF1-206ENST00000423161 LOC102724200A0A096LPH7 203 aaPredicted RBP13.81□□□□□ -0.2
SREBF1-206ENST00000423161 TEX50A0A1B0GTY4 177 aa13.81□□□□□ -0.2
SREBF1-206ENST00000423161 PMP2P02689 132 aa13.81□□□□□ -0.2
SREBF1-206ENST00000423161 SERPINE2P07093 398 aa13.81□□□□□ -0.2
SREBF1-206ENST00000423161 F2RP25116 425 aa13.81□□□□□ -0.2
SREBF1-206ENST00000423161 TAS2R20P59543 309 aa13.81□□□□□ -0.2
SREBF1-206ENST00000423161 WT1-ASQ06250 92 aa13.81□□□□□ -0.2
SREBF1-206ENST00000423161 TMEM69Q5SWH9 247 aa13.81□□□□□ -0.2
SREBF1-206ENST00000423161 SLC25A24Q6NUK1 477 aa13.81□□□□□ -0.2
SREBF1-206ENST00000423161 OR1L6Q8NGR2 347 aa13.81□□□□□ -0.2
SREBF1-206ENST00000423161 OR5H2Q8NGV7 314 aa13.81□□□□□ -0.2
SREBF1-206ENST00000423161 HINT2Q9BX68 163 aa13.81□□□□□ -0.2
SREBF1-206ENST00000423161 ANAPC10Q9UM13 185 aa13.81□□□□□ -0.2
SREBF1-206ENST00000423161 OR2T8A6NH00 312 aa13.8□□□□□ -0.2
SREBF1-206ENST00000423161 PGLYRP1O75594 196 aaPredicted RBP13.8□□□□□ -0.2
SREBF1-206ENST00000423161 LPAR6P43657 344 aa13.8□□□□□ -0.2
SREBF1-206ENST00000423161 TAS2R46P59540 309 aa13.8□□□□□ -0.2
SREBF1-206ENST00000423161 SAMD12Q8N8I0 201 aa13.8□□□□□ -0.2
SREBF1-206ENST00000423161 TMEM190Q8WZ59 177 aa13.8□□□□□ -0.2
SREBF1-206ENST00000423161 FXYD6Q9H0Q3 95 aa13.8□□□□□ -0.2
SREBF1-206ENST00000423161 KRASP01116 189 aa13.79□□□□□ -0.2
SREBF1-206ENST00000423161 NAT1P18440 290 aa13.79□□□□□ -0.2
SREBF1-206ENST00000423161 G6PCP35575 357 aa13.79□□□□□ -0.2
SREBF1-206ENST00000423161 RPS19P39019 145 aaKnown RBP13.79□□□□□ -0.2
SREBF1-206ENST00000423161 CMTM1Q8IZ96 169 aa13.79□□□□□ -0.2
SREBF1-206ENST00000423161 SLC38A6Q8IZM9 456 aa13.79□□□□□ -0.2
SREBF1-206ENST00000423161 OR2C3Q8N628 320 aa13.79□□□□□ -0.2
SREBF1-206ENST00000423161 TSPAN14Q8NG11 270 aa13.79□□□□□ -0.2
SREBF1-206ENST00000423161 FCAMRQ8WWV6 532 aa13.79□□□□□ -0.2
SREBF1-206ENST00000423161 LSM10Q969L4 123 aaKnown RBP13.79□□□□□ -0.2
SREBF1-206ENST00000423161 DGCR14Q96DF8 476 aaKnown RBP13.79□□□□□ -0.2
SREBF1-206ENST00000423161 BSCL2Q96G97 398 aaPredicted RBP13.79□□□□□ -0.2
SREBF1-206ENST00000423161 OVOL2Q9BRP0 275 aa13.79□□□□□ -0.2
SREBF1-206ENST00000423161 NDUFA4L2Q9NRX3 87 aa13.79□□□□□ -0.2
SREBF1-206ENST00000423161 NSG2Q9Y328 171 aa13.79□□□□□ -0.2
SREBF1-206ENST00000423161 F11RQ9Y624 299 aaKnown RBP13.79□□□□□ -0.2
SREBF1-206ENST00000423161 IGHV3-21A0A0B4J1V1 117 aa13.78□□□□□ -0.2
SREBF1-206ENST00000423161 GPR31O00270 319 aa13.78□□□□□ -0.2
SREBF1-206ENST00000423161 SNAPC5O75971 98 aa13.78□□□□□ -0.2
SREBF1-206ENST00000423161 MFAP2P55001 183 aa13.78□□□□□ -0.2
SREBF1-206ENST00000423161 LSM3P62310 102 aaKnown RBP13.78□□□□□ -0.2
SREBF1-206ENST00000423161 SPSB3Q6PJ21 355 aa13.78□□□□□ -0.2
SREBF1-206ENST00000423161 SPAG8Q99932 426 aaPredicted RBP13.78□□□□□ -0.2
SREBF1-206ENST00000423161 C5orf66Q9H5L9 145 aa13.78□□□□□ -0.2
SREBF1-206ENST00000423161 DAZ1Q9NQZ3 744 aaKnown RBP13.78□□□□□ -0.2
SREBF1-206ENST00000423161 OR51B2Q9Y5P1 312 aa13.78□□□□□ -0.2
SREBF1-206ENST00000423161 PRSS3P35030 304 aa13.77□□□□□ -0.21
SREBF1-206ENST00000423161 OR6F1Q8NGZ6 308 aa13.77□□□□□ -0.21
SREBF1-206ENST00000423161 CHRDL1Q9BU40 450 aa13.77□□□□□ -0.21
SREBF1-206ENST00000423161 C21orf62Q9NYP8 219 aa13.77□□□□□ -0.21
SREBF1-206ENST00000423161 UBQLN2Q9UHD9 624 aa13.77□□□□□ -0.21
SREBF1-206ENST00000423161 NDUFA4O00483 81 aa13.76□□□□□ -0.21
SREBF1-206ENST00000423161 TSPAN4O14817 238 aa13.76□□□□□ -0.21
SREBF1-206ENST00000423161 HRH1P35367 487 aa13.76□□□□□ -0.21
SREBF1-206ENST00000423161 CADM3Q8N126 398 aa13.76□□□□□ -0.21
SREBF1-206ENST00000423161 UBAC2Q8NBM4 344 aa13.76□□□□□ -0.21
SREBF1-206ENST00000423161 SCARB1Q8WTV0 552 aa13.76□□□□□ -0.21
SREBF1-206ENST00000423161 YIPF6Q96EC8 236 aa13.76□□□□□ -0.21
SREBF1-206ENST00000423161 TMEM56Q96MV1 263 aa13.76□□□□□ -0.21
SREBF1-206ENST00000423161 ATP6V0BQ99437 205 aa13.76□□□□□ -0.21
SREBF1-206ENST00000423161 C20orf24Q9BUV8 137 aa13.76□□□□□ -0.21
SREBF1-206ENST00000423161 PRNDQ9UKY0 176 aa13.76□□□□□ -0.21
SREBF1-206ENST00000423161 ALMS1Q8TCU4 4167 aa13.75□□□□□ -0.21
SREBF1-206ENST00000423161 IGHV3OR16-8A0A075B7F1 116 aa13.75□□□□□ -0.21
SREBF1-206ENST00000423161 F8W735 103 aaPredicted RBP13.75□□□□□ -0.21
SREBF1-206ENST00000423161 K7EIM0 57 aa13.75□□□□□ -0.21
SREBF1-206ENST00000423161 HLA-DMAP28067 261 aa13.75□□□□□ -0.21
SREBF1-206ENST00000423161 PHLDA2Q53GA4 152 aa13.75□□□□□ -0.21
SREBF1-206ENST00000423161 Q56UQ5 140 aa13.75□□□□□ -0.21
SREBF1-206ENST00000423161 LAMTOR1Q6IAA8 161 aa13.75□□□□□ -0.21
SREBF1-206ENST00000423161 LYSMD2Q8IV50 215 aa13.75□□□□□ -0.21
SREBF1-206ENST00000423161 OR5B3Q8NH48 314 aa13.75□□□□□ -0.21
SREBF1-206ENST00000423161 TSC22D3Q99576 134 aa13.75□□□□□ -0.21
SREBF1-206ENST00000423161 VCX3AQ9NNX9 186 aa13.75□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 59.7 ms