RNA–Protein interactions for RNA: ENST00000409783.6

PTCD3-203, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 5

Gene PTCD3, Length 587 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-203ENST00000409783 SRSF8Q9BRL6 282 aaKnown RBP17.31■□□□□ 0.36
PTCD3-203ENST00000409783 QTRT1Q9BXR0 403 aaKnown RBP17.31■□□□□ 0.36
PTCD3-203ENST00000409783 ALX4Q9H161 411 aaPredicted RBP17.31■□□□□ 0.36
PTCD3-203ENST00000409783 KLK9Q9UKQ9 250 aa17.31■□□□□ 0.36
PTCD3-203ENST00000409783 ZNF257Q9Y2Q1 563 aa17.31■□□□□ 0.36
PTCD3-203ENST00000409783 IGHV3-11P01762 117 aa17.3■□□□□ 0.36
PTCD3-203ENST00000409783 LGALS1P09382 135 aaKnown RBP17.3■□□□□ 0.36
PTCD3-203ENST00000409783 AKR1C4P17516 323 aa17.3■□□□□ 0.36
PTCD3-203ENST00000409783 PSMB6P28072 239 aa17.3■□□□□ 0.36
PTCD3-203ENST00000409783 TMEM187Q14656 261 aa17.3■□□□□ 0.36
PTCD3-203ENST00000409783 SLC25A42Q86VD7 318 aa17.3■□□□□ 0.36
PTCD3-203ENST00000409783 SELENOHQ8IZQ5 122 aaKnown RBP17.3■□□□□ 0.36
PTCD3-203ENST00000409783 OR10W1Q8NGF6 305 aa17.3■□□□□ 0.36
PTCD3-203ENST00000409783 TMEM56Q96MV1 263 aa17.3■□□□□ 0.36
PTCD3-203ENST00000409783 C7orf50Q9BRJ6 194 aaKnown RBP17.3■□□□□ 0.36
PTCD3-203ENST00000409783 CCDC32Q9BV29 185 aa17.3■□□□□ 0.36
PTCD3-203ENST00000409783 OR51B2Q9Y5P1 312 aa17.3■□□□□ 0.36
PTCD3-203ENST00000409783 TMEM56-RWDD3S4R434 201 aa17.3■□□□□ 0.36
PTCD3-203ENST00000409783 A0A0B4J293 547 aa17.29■□□□□ 0.36
PTCD3-203ENST00000409783 TRAPPC2P0DI81 140 aa17.29■□□□□ 0.36
PTCD3-203ENST00000409783 TRAPPC2BP0DI82 140 aa17.29■□□□□ 0.36
PTCD3-203ENST00000409783 RBMS2Q15434 407 aaKnown RBP17.29■□□□□ 0.36
PTCD3-203ENST00000409783 OR11H1Q8NG94 326 aa17.29■□□□□ 0.36
PTCD3-203ENST00000409783 OR5B3Q8NH48 314 aa17.29■□□□□ 0.36
PTCD3-203ENST00000409783 FANCD2OSQ96PS1 177 aa17.29■□□□□ 0.36
PTCD3-203ENST00000409783 FKBP11Q9NYL4 201 aa17.29■□□□□ 0.36
PTCD3-203ENST00000409783 ATG12O94817 140 aa17.28■□□□□ 0.36
PTCD3-203ENST00000409783 NDUFB6O95139 128 aa17.28■□□□□ 0.36
PTCD3-203ENST00000409783 REG1AP05451 166 aa17.28■□□□□ 0.36
PTCD3-203ENST00000409783 AKR1C2P52895 323 aa17.28■□□□□ 0.36
PTCD3-203ENST00000409783 WT1-ASQ06250 92 aa17.28■□□□□ 0.36
PTCD3-203ENST00000409783 THOC7Q6I9Y2 204 aaKnown RBP17.28■□□□□ 0.36
PTCD3-203ENST00000409783 TMED4Q7Z7H5 227 aa17.28■□□□□ 0.36
PTCD3-203ENST00000409783 RBPMSQ93062 196 aaKnown RBP17.28■□□□□ 0.36
PTCD3-203ENST00000409783 PRR13Q9NZ81 148 aa17.28■□□□□ 0.36
PTCD3-203ENST00000409783 KCNIP3Q9Y2W7 256 aa17.28■□□□□ 0.36
PTCD3-203ENST00000409783 NOTCH1P46531 2555 aa17.27■□□□□ 0.36
PTCD3-203ENST00000409783 A0A0G2JLM5 398 aa17.27■□□□□ 0.36
PTCD3-203ENST00000409783 RHOGP84095 191 aa17.27■□□□□ 0.36
PTCD3-203ENST00000409783 TMEM128Q5BJH2 165 aa17.27■□□□□ 0.36
PTCD3-203ENST00000409783 Q6ZRM9 215 aa17.27■□□□□ 0.36
PTCD3-203ENST00000409783 ZNF429Q86V71 674 aa17.27■□□□□ 0.36
PTCD3-203ENST00000409783 OR1N2Q8NGR9 330 aa17.27■□□□□ 0.36
PTCD3-203ENST00000409783 OR4A16Q8NH70 328 aa17.27■□□□□ 0.36
PTCD3-203ENST00000409783 USMG5Q96IX5 58 aa17.27■□□□□ 0.36
PTCD3-203ENST00000409783 DMRT1Q9Y5R6 373 aa17.27■□□□□ 0.36
PTCD3-203ENST00000409783 CD33P20138 364 aa17.26■□□□□ 0.35
PTCD3-203ENST00000409783 HSPE1P61604 102 aaKnown RBP17.26■□□□□ 0.35
PTCD3-203ENST00000409783 ZNF616Q08AN1 781 aa17.26■□□□□ 0.35
PTCD3-203ENST00000409783 SAMD5Q5TGI4 173 aa17.26■□□□□ 0.35
PTCD3-203ENST00000409783 TMEM268Q5VZI3 342 aa17.26■□□□□ 0.35
PTCD3-203ENST00000409783 ZNF343Q6P1L6 599 aa17.26■□□□□ 0.35
PTCD3-203ENST00000409783 IL22RA2Q969J5 263 aa17.26■□□□□ 0.35
PTCD3-203ENST00000409783 IGLV11-55A0A075B6I3 123 aa17.25■□□□□ 0.35
PTCD3-203ENST00000409783 IGHV4OR15-8A0A075B7B6 117 aa17.25■□□□□ 0.35
PTCD3-203ENST00000409783 A0A087WW49 117 aa17.25■□□□□ 0.35
PTCD3-203ENST00000409783 C13orf42A0A1B0GVH6 325 aa17.25■□□□□ 0.35
PTCD3-203ENST00000409783 FAM223BA6NKX1 122 aa17.25■□□□□ 0.35
PTCD3-203ENST00000409783 CENPXA8MT69 81 aa17.25■□□□□ 0.35
PTCD3-203ENST00000409783 OR13C7P0DN81 318 aa17.25■□□□□ 0.35
PTCD3-203ENST00000409783 HSD17B13Q7Z5P4 300 aaPredicted RBP17.25■□□□□ 0.35
PTCD3-203ENST00000409783 FAM219AQ8IW50 185 aa17.25■□□□□ 0.35
PTCD3-203ENST00000409783 FAM223AQ8IWN6 122 aa17.25■□□□□ 0.35
PTCD3-203ENST00000409783 CENPSQ8N2Z9 138 aa17.25■□□□□ 0.35
PTCD3-203ENST00000409783 NECAP1Q8NC96 275 aa17.25■□□□□ 0.35
PTCD3-203ENST00000409783 LSM10Q969L4 123 aaKnown RBP17.25■□□□□ 0.35
PTCD3-203ENST00000409783 RRNAD1Q96FB5 475 aaKnown RBP17.25■□□□□ 0.35
PTCD3-203ENST00000409783 HINT2Q9BX68 163 aa17.25■□□□□ 0.35
PTCD3-203ENST00000409783 FLVCR2Q9UPI3 526 aa17.25■□□□□ 0.35
PTCD3-203ENST00000409783 G3V4G9 280 aa17.24■□□□□ 0.35
PTCD3-203ENST00000409783 LYRM1O43325 122 aa17.24■□□□□ 0.35
PTCD3-203ENST00000409783 OR2J3O76001 311 aa17.24■□□□□ 0.35
PTCD3-203ENST00000409783 IGLL1P15814 213 aa17.24■□□□□ 0.35
PTCD3-203ENST00000409783 PRCDQ00LT1 54 aa17.24■□□□□ 0.35
PTCD3-203ENST00000409783 ZNF846Q147U1 533 aa17.24■□□□□ 0.35
PTCD3-203ENST00000409783 AARDQ4LEZ3 155 aa17.24■□□□□ 0.35
PTCD3-203ENST00000409783 SLC35G3Q8N808 338 aa17.24■□□□□ 0.35
PTCD3-203ENST00000409783 GPR146Q96CH1 333 aa17.24■□□□□ 0.35
PTCD3-203ENST00000409783 WDR12Q9GZL7 423 aaKnown RBP17.24■□□□□ 0.35
PTCD3-203ENST00000409783 ST8SIA3O43173 380 aa17.23■□□□□ 0.35
PTCD3-203ENST00000409783 NDUFB8O95169 186 aa17.23■□□□□ 0.35
PTCD3-203ENST00000409783 HSPB1P04792 205 aaKnown RBP17.23■□□□□ 0.35
PTCD3-203ENST00000409783 PPP1R1AQ13522 171 aa17.23■□□□□ 0.35
PTCD3-203ENST00000409783 OXLD1Q5BKU9 147 aa17.23■□□□□ 0.35
PTCD3-203ENST00000409783 LINC01619G3V211 115 aa17.22■□□□□ 0.35
PTCD3-203ENST00000409783 DHFRP00374 187 aa17.22■□□□□ 0.35
PTCD3-203ENST00000409783 TRBV12-3P01733 135 aa17.22■□□□□ 0.35
PTCD3-203ENST00000409783 OR8U8P0C7N1 319 aa17.22■□□□□ 0.35
PTCD3-203ENST00000409783 MFAP2P55001 183 aa17.22■□□□□ 0.35
PTCD3-203ENST00000409783 ATP5G2Q06055 141 aa17.22■□□□□ 0.35
PTCD3-203ENST00000409783 C15orf32Q32M92 178 aa17.22■□□□□ 0.35
PTCD3-203ENST00000409783 ANKRD55Q3KP44 614 aa17.22■□□□□ 0.35
PTCD3-203ENST00000409783 DPF1Q92782 380 aa17.22■□□□□ 0.35
PTCD3-203ENST00000409783 RCC1LQ96I51 464 aaKnown RBP17.22■□□□□ 0.35
PTCD3-203ENST00000409783 FBXL7Q9UJT9 491 aa17.22■□□□□ 0.35
PTCD3-203ENST00000409783 TBC1D24Q9ULP9 559 aa17.22■□□□□ 0.35
PTCD3-203ENST00000409783 A0A0B4J2A0 478 aa17.21■□□□□ 0.35
PTCD3-203ENST00000409783 SFT2D2O95562 160 aa17.21■□□□□ 0.35
PTCD3-203ENST00000409783 ANXA3P12429 323 aa17.21■□□□□ 0.35
PTCD3-203ENST00000409783 DEFA4P12838 97 aa17.21■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 946.4 ms