RNA–Protein interactions for RNA: ENST00000407019.6

NUP50-203, Transcript of nucleoporin 50, humanhuman

TSL 1 (best) BASIC

Gene NUP50, Length 2,059 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-203ENST00000407019 CCL3L1P16619 93 aa13.75□□□□□ -0.21
NUP50-203ENST00000407019 GFI1BQ5VTD9 330 aa13.75□□□□□ -0.21
NUP50-203ENST00000407019 MRPL20Q9BYC9 149 aaKnown RBP13.75□□□□□ -0.21
NUP50-203ENST00000407019 ZNF835Q9Y2P0 537 aa13.75□□□□□ -0.21
NUP50-203ENST00000407019 A0A1W2PPQ1 181 aa13.74□□□□□ -0.21
NUP50-203ENST00000407019 APOA2P02652 100 aa13.74□□□□□ -0.21
NUP50-203ENST00000407019 IGFBP2P18065 325 aa13.74□□□□□ -0.21
NUP50-203ENST00000407019 GCHFRP30047 84 aa13.74□□□□□ -0.21
NUP50-203ENST00000407019 PRR20EP86478 221 aa13.74□□□□□ -0.21
NUP50-203ENST00000407019 PRR20CP86479 221 aa13.74□□□□□ -0.21
NUP50-203ENST00000407019 PRR20DP86480 221 aa13.74□□□□□ -0.21
NUP50-203ENST00000407019 PRR20BP86481 221 aa13.74□□□□□ -0.21
NUP50-203ENST00000407019 PRR20AP86496 221 aa13.74□□□□□ -0.21
NUP50-203ENST00000407019 OSR1Q8TAX0 266 aaPredicted RBP13.74□□□□□ -0.21
NUP50-203ENST00000407019 PCGF1Q9BSM1 259 aa13.74□□□□□ -0.21
NUP50-203ENST00000407019 DERL1Q9BUN8 251 aa13.74□□□□□ -0.21
NUP50-203ENST00000407019 GPR61Q9BZJ8 451 aa13.74□□□□□ -0.21
NUP50-203ENST00000407019 ZNF292O60281 2723 aa13.73□□□□□ -0.21
NUP50-203ENST00000407019 TEX50A0A1B0GTY4 177 aa13.73□□□□□ -0.21
NUP50-203ENST00000407019 VSTM5A8MXK1 200 aa13.73□□□□□ -0.21
NUP50-203ENST00000407019 GGCTO75223 188 aaKnown RBP13.73□□□□□ -0.21
NUP50-203ENST00000407019 CD99P14209 185 aa13.73□□□□□ -0.21
NUP50-203ENST00000407019 PDZD11Q5EBL8 140 aa13.73□□□□□ -0.21
NUP50-203ENST00000407019 SPATA31B1PQ5VZV4 182 aa13.73□□□□□ -0.21
NUP50-203ENST00000407019 TMEM200BQ69YZ2 307 aa13.73□□□□□ -0.21
NUP50-203ENST00000407019 KCNIP4Q6PIL6 250 aa13.73□□□□□ -0.21
NUP50-203ENST00000407019 OR5B3Q8NH48 314 aa13.73□□□□□ -0.21
NUP50-203ENST00000407019 SEPSECSQ9HD40 501 aaKnown RBP13.73□□□□□ -0.21
NUP50-203ENST00000407019 FCN3O75636 299 aa13.73□□□□□ -0.21
NUP50-203ENST00000407019 MT-CO2P00403 227 aa13.73□□□□□ -0.21
NUP50-203ENST00000407019 CHRNA7P36544 502 aa13.73□□□□□ -0.21
NUP50-203ENST00000407019 ATP5IP56385 69 aaPredicted RBP13.73□□□□□ -0.21
NUP50-203ENST00000407019 CLEC12BQ2HXU8 276 aa13.73□□□□□ -0.21
NUP50-203ENST00000407019 PYY3Q5JQD4 70 aa13.73□□□□□ -0.21
NUP50-203ENST00000407019 OR10D4PQ8NGN7 298 aa13.73□□□□□ -0.21
NUP50-203ENST00000407019 OR2T10Q8NGZ9 312 aa13.73□□□□□ -0.21
NUP50-203ENST00000407019 H1FXQ92522 213 aaKnown RBP13.73□□□□□ -0.21
NUP50-203ENST00000407019 HARBI1Q96MB7 349 aa13.73□□□□□ -0.21
NUP50-203ENST00000407019 TMEM106BQ9NUM4 274 aa13.73□□□□□ -0.21
NUP50-203ENST00000407019 PITPNC1Q9UKF7 332 aa13.73□□□□□ -0.21
NUP50-203ENST00000407019 SCO2A0A1W2PP80 73 aa13.72□□□□□ -0.21
NUP50-203ENST00000407019 FAM3BP58499 235 aaPredicted RBP13.72□□□□□ -0.21
NUP50-203ENST00000407019 C2orf83Q53S99 150 aa13.72□□□□□ -0.21
NUP50-203ENST00000407019 TMEM144Q7Z5S9 345 aa13.72□□□□□ -0.21
NUP50-203ENST00000407019 CCL17Q92583 94 aa13.72□□□□□ -0.21
NUP50-203ENST00000407019 YTHDF2Q9Y5A9 579 aaKnown RBP13.72□□□□□ -0.21
NUP50-203ENST00000407019 LINC00587B1AMM8 73 aa13.71□□□□□ -0.21
NUP50-203ENST00000407019 H0YJW9 148 aa13.71□□□□□ -0.21
NUP50-203ENST00000407019 NDUFB3O43676 98 aa13.71□□□□□ -0.21
NUP50-203ENST00000407019 TMEM204Q9BSN7 226 aa13.71□□□□□ -0.21
NUP50-203ENST00000407019 LRFN3Q9BTN0 628 aa13.71□□□□□ -0.21
NUP50-203ENST00000407019 SLC45A2Q9UMX9 530 aa13.71□□□□□ -0.21
NUP50-203ENST00000407019 SSUH2Q9Y2M2 353 aa13.71□□□□□ -0.21
NUP50-203ENST00000407019 PLCE1Q9P212 2302 aa13.71□□□□□ -0.21
NUP50-203ENST00000407019 NBEAQ8NFP9 2946 aa13.71□□□□□ -0.21
NUP50-203ENST00000407019 TYMSP04818 313 aa13.71□□□□□ -0.21
NUP50-203ENST00000407019 LINC00869P0C866 280 aa13.71□□□□□ -0.21
NUP50-203ENST00000407019 TBR1Q16650 682 aa13.71□□□□□ -0.21
NUP50-203ENST00000407019 LRRC10Q5BKY1 277 aa13.71□□□□□ -0.21
NUP50-203ENST00000407019 SPACA3Q8IXA5 215 aa13.71□□□□□ -0.21
NUP50-203ENST00000407019 OR5AN1Q8NGI8 311 aa13.71□□□□□ -0.21
NUP50-203ENST00000407019 OR1L8Q8NGR8 309 aa13.71□□□□□ -0.21
NUP50-203ENST00000407019 FAM122AQ96E09 287 aa13.71□□□□□ -0.21
NUP50-203ENST00000407019 AURKAIP1Q9NWT8 199 aaPredicted RBP13.71□□□□□ -0.21
NUP50-203ENST00000407019 C1QTNF9P0C862 333 aa13.7□□□□□ -0.22
NUP50-203ENST00000407019 RNASE2P10153 161 aaKnown RBP13.7□□□□□ -0.22
NUP50-203ENST00000407019 TMEM177Q53S58 311 aa13.7□□□□□ -0.22
NUP50-203ENST00000407019 LYPD2Q6UXB3 125 aa13.7□□□□□ -0.22
NUP50-203ENST00000407019 ZNF114Q8NC26 417 aa13.7□□□□□ -0.22
NUP50-203ENST00000407019 OR4P4Q8NGL7 312 aa13.7□□□□□ -0.22
NUP50-203ENST00000407019 RNASE6Q93091 150 aaKnown RBP13.7□□□□□ -0.22
NUP50-203ENST00000407019 WFIKKN1Q96NZ8 548 aa13.7□□□□□ -0.22
NUP50-203ENST00000407019 DYNLRB1Q9NP97 96 aa13.7□□□□□ -0.22
NUP50-203ENST00000407019 NGBQ9NPG2 151 aa13.7□□□□□ -0.22
NUP50-203ENST00000407019 AKAP13Q12802 2813 aa13.7□□□□□ -0.22
NUP50-203ENST00000407019 MDFIC2A0A1B0GVS7 189 aa13.7□□□□□ -0.22
NUP50-203ENST00000407019 PGPEP1LA6NFU8 196 aa13.7□□□□□ -0.22
NUP50-203ENST00000407019 TNFRSF13BO14836 293 aaPredicted RBP13.7□□□□□ -0.22
NUP50-203ENST00000407019 PRR30Q53SZ7 412 aaPredicted RBP13.7□□□□□ -0.22
NUP50-203ENST00000407019 FAM78BQ5VT40 261 aa13.7□□□□□ -0.22
NUP50-203ENST00000407019 FAM71F2Q6NXP2 309 aa13.7□□□□□ -0.22
NUP50-203ENST00000407019 ASCL5Q7RTU5 278 aa13.7□□□□□ -0.22
NUP50-203ENST00000407019 MOB3BQ86TA1 216 aa13.7□□□□□ -0.22
NUP50-203ENST00000407019 OR10X1Q8NGY0 326 aa13.7□□□□□ -0.22
NUP50-203ENST00000407019 SLC35E1Q96K37 410 aa13.7□□□□□ -0.22
NUP50-203ENST00000407019 COMMD5Q9GZQ3 224 aa13.7□□□□□ -0.22
NUP50-203ENST00000407019 ICE1Q9Y2F5 2266 aa13.69□□□□□ -0.22
NUP50-203ENST00000407019 TRBV20OR9-2A0A075B6H5 130 aa13.69□□□□□ -0.22
NUP50-203ENST00000407019 FOXH1O75593 365 aa13.69□□□□□ -0.22
NUP50-203ENST00000407019 FABP4P15090 132 aa13.69□□□□□ -0.22
NUP50-203ENST00000407019 CHRNB4P30926 498 aa13.69□□□□□ -0.22
NUP50-203ENST00000407019 REG1BP48304 166 aa13.69□□□□□ -0.22
NUP50-203ENST00000407019 LCN2P80188 198 aa13.69□□□□□ -0.22
NUP50-203ENST00000407019 MIR17HGQ75NE6 70 aa13.69□□□□□ -0.22
NUP50-203ENST00000407019 TMEM183AQ8IXX5 376 aa13.69□□□□□ -0.22
NUP50-203ENST00000407019 FLYWCH2Q96CP2 140 aaKnown RBP13.69□□□□□ -0.22
NUP50-203ENST00000407019 SFRP2Q96HF1 295 aa13.69□□□□□ -0.22
NUP50-203ENST00000407019 IMMP2LQ96T52 175 aa13.69□□□□□ -0.22
NUP50-203ENST00000407019 NABP2Q9BQ15 211 aa13.69□□□□□ -0.22
NUP50-203ENST00000407019 FUT9Q9Y231 359 aa13.69□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 53.4 ms