RNA–Protein interactions for RNA: ENST00000398631.2

PCDHA12-201, Transcript of protocadherin alpha 12, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PCDHA12, Length 5,233 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA12-201ENST00000398631 PSME4Q14997 1843 aa13.64□□□□□ -0.23
PCDHA12-201ENST00000398631 OR4C46A6NHA9 309 aa13.64□□□□□ -0.23
PCDHA12-201ENST00000398631 PMCHL1Q16048 86 aa13.64□□□□□ -0.23
PCDHA12-201ENST00000398631 FAM159AQ6UWV7 190 aa13.64□□□□□ -0.23
PCDHA12-201ENST00000398631 RARRES2Q99969 163 aa13.64□□□□□ -0.23
PCDHA12-201ENST00000398631 TMEM250H0YL14 139 aa13.64□□□□□ -0.23
PCDHA12-201ENST00000398631 OR1P1Q8NH06 330 aa13.64□□□□□ -0.23
PCDHA12-201ENST00000398631 HSPB9Q9BQS6 159 aa13.64□□□□□ -0.23
PCDHA12-201ENST00000398631 ARPC1AQ92747 370 aa13.64□□□□□ -0.23
PCDHA12-201ENST00000398631 DIDO1Q9BTC0 2240 aaKnown RBP13.64□□□□□ -0.23
PCDHA12-201ENST00000398631 RALGAPA2Q2PPJ7 1873 aa13.64□□□□□ -0.23
PCDHA12-201ENST00000398631 NBEAP1P0C6P0 100 aa13.64□□□□□ -0.23
PCDHA12-201ENST00000398631 GCSHP23434 173 aa13.64□□□□□ -0.23
PCDHA12-201ENST00000398631 KIF26BQ2KJY2 2108 aa13.64□□□□□ -0.23
PCDHA12-201ENST00000398631 MED12Q93074 2177 aa13.64□□□□□ -0.23
PCDHA12-201ENST00000398631 NUTF2P61970 127 aaKnown RBP13.63□□□□□ -0.23
PCDHA12-201ENST00000398631 ICAM4Q14773 271 aa13.63□□□□□ -0.23
PCDHA12-201ENST00000398631 ZNF362Q5T0B9 420 aaPredicted RBP13.63□□□□□ -0.23
PCDHA12-201ENST00000398631 MESP1Q9BRJ9 268 aa13.63□□□□□ -0.23
PCDHA12-201ENST00000398631 FOXI3A8MTJ6 420 aaPredicted RBP13.63□□□□□ -0.23
PCDHA12-201ENST00000398631 CCL3L1P16619 93 aa13.63□□□□□ -0.23
PCDHA12-201ENST00000398631 FHITP49789 147 aa13.63□□□□□ -0.23
PCDHA12-201ENST00000398631 ZNF418Q8TF45 676 aaPredicted RBP13.63□□□□□ -0.23
PCDHA12-201ENST00000398631 HIST1H2BAQ96A08 127 aa13.63□□□□□ -0.23
PCDHA12-201ENST00000398631 MRPL18Q9H0U6 180 aaKnown RBP13.63□□□□□ -0.23
PCDHA12-201ENST00000398631 SPRR3Q9UBC9 169 aa13.63□□□□□ -0.23
PCDHA12-201ENST00000398631 PINLYPA6NC86 204 aa13.63□□□□□ -0.23
PCDHA12-201ENST00000398631 AMY1AP04745 511 aa13.63□□□□□ -0.23
PCDHA12-201ENST00000398631 WDR25Q64LD2 544 aaPredicted RBP13.63□□□□□ -0.23
PCDHA12-201ENST00000398631 OR4X2Q8NGF9 303 aa13.63□□□□□ -0.23
PCDHA12-201ENST00000398631 NPCDR1Q9BY65 106 aa13.63□□□□□ -0.23
PCDHA12-201ENST00000398631 LEPROTL1O95214 131 aa13.63□□□□□ -0.23
PCDHA12-201ENST00000398631 PLPPR1Q8TBJ4 325 aa13.63□□□□□ -0.23
PCDHA12-201ENST00000398631 RCC1LQ96I51 464 aaKnown RBP13.63□□□□□ -0.23
PCDHA12-201ENST00000398631 GPR82Q96P67 336 aa13.63□□□□□ -0.23
PCDHA12-201ENST00000398631 LYPD3O95274 346 aa13.62□□□□□ -0.23
PCDHA12-201ENST00000398631 NUDT3O95989 172 aa13.62□□□□□ -0.23
PCDHA12-201ENST00000398631 IGKV3-20P01619 116 aa13.62□□□□□ -0.23
PCDHA12-201ENST00000398631 FBLN5Q9UBX5 448 aa13.62□□□□□ -0.23
PCDHA12-201ENST00000398631 FOXA2Q9Y261 457 aaPredicted RBP13.62□□□□□ -0.23
PCDHA12-201ENST00000398631 LCTP09848 1927 aa13.62□□□□□ -0.23
PCDHA12-201ENST00000398631 IGHV3-49A0A0A0MS15 119 aa13.62□□□□□ -0.23
PCDHA12-201ENST00000398631 HERPUD1Q15011 391 aa13.62□□□□□ -0.23
PCDHA12-201ENST00000398631 CACNG8Q8WXS5 425 aa13.62□□□□□ -0.23
PCDHA12-201ENST00000398631 MBNL2Q5VZF2 373 aaKnown RBP13.62□□□□□ -0.23
PCDHA12-201ENST00000398631 TRBV6-7A0A0A0MS04 114 aa13.61□□□□□ -0.23
PCDHA12-201ENST00000398631 GPX4P36969 197 aaPredicted RBP13.61□□□□□ -0.23
PCDHA12-201ENST00000398631 LY6DQ14210 128 aa13.61□□□□□ -0.23
PCDHA12-201ENST00000398631 FAM74A4Q5TZK3 123 aa13.61□□□□□ -0.23
PCDHA12-201ENST00000398631 WDR82Q6UXN9 313 aa13.61□□□□□ -0.23
PCDHA12-201ENST00000398631 NEU1Q99519 415 aa13.61□□□□□ -0.23
PCDHA12-201ENST00000398631 S4R3C0 116 aa13.61□□□□□ -0.23
PCDHA12-201ENST00000398631 ZNF236Q9UL36 1845 aa13.61□□□□□ -0.23
PCDHA12-201ENST00000398631 CCL1P22362 96 aa13.61□□□□□ -0.23
PCDHA12-201ENST00000398631 GPR183P32249 361 aa13.61□□□□□ -0.23
PCDHA12-201ENST00000398631 SDHCQ99643 169 aaPredicted RBP13.61□□□□□ -0.23
PCDHA12-201ENST00000398631 YPEL1O60688 119 aa13.61□□□□□ -0.23
PCDHA12-201ENST00000398631 LINC00518Q8N0U6 118 aa13.61□□□□□ -0.23
PCDHA12-201ENST00000398631 YPEL2Q96QA6 119 aa13.61□□□□□ -0.23
PCDHA12-201ENST00000398631 IGHV3-23P01764 117 aa13.61□□□□□ -0.23
PCDHA12-201ENST00000398631 CDX1P47902 265 aaPredicted RBP13.61□□□□□ -0.23
PCDHA12-201ENST00000398631 CENPWQ5EE01 88 aa13.61□□□□□ -0.23
PCDHA12-201ENST00000398631 IGFBP2P18065 325 aa13.6□□□□□ -0.23
PCDHA12-201ENST00000398631 ZNF56Q15929 161 aa13.6□□□□□ -0.23
PCDHA12-201ENST00000398631 RNASEH2CQ8TDP1 164 aaKnown RBP13.6□□□□□ -0.23
PCDHA12-201ENST00000398631 GTF3AQ92664 365 aaKnown RBP13.6□□□□□ -0.23
PCDHA12-201ENST00000398631 RTBDNQ9BSG5 229 aaPredicted RBP13.6□□□□□ -0.23
PCDHA12-201ENST00000398631 ZNF385CQ66K41 422 aaPredicted RBP13.6□□□□□ -0.23
PCDHA12-201ENST00000398631 C12orf54Q6X4T0 127 aa13.6□□□□□ -0.23
PCDHA12-201ENST00000398631 IGKV1-9A0A0C4DH69 117 aa13.6□□□□□ -0.23
PCDHA12-201ENST00000398631 IGHV1-18A0A0C4DH31 117 aa13.6□□□□□ -0.23
PCDHA12-201ENST00000398631 MSGN1A6NI15 193 aa13.6□□□□□ -0.23
PCDHA12-201ENST00000398631 LINC00271P0C7V0 271 aa13.6□□□□□ -0.23
PCDHA12-201ENST00000398631 TIMP3P35625 211 aa13.6□□□□□ -0.23
PCDHA12-201ENST00000398631 ZCCHC24Q8N2G6 241 aaKnown RBP13.6□□□□□ -0.23
PCDHA12-201ENST00000398631 KIR2DL4Q99706 377 aa13.6□□□□□ -0.23
PCDHA12-201ENST00000398631 YAE1D1Q9NRH1 226 aa13.59□□□□□ -0.23
PCDHA12-201ENST00000398631 UQCR10Q9UDW1 63 aa13.59□□□□□ -0.23
PCDHA12-201ENST00000398631 SIGLEC5O15389 551 aa13.59□□□□□ -0.23
PCDHA12-201ENST00000398631 THBDP07204 575 aa13.59□□□□□ -0.23
PCDHA12-201ENST00000398631 TMEM133Q9H2Q1 129 aa13.59□□□□□ -0.23
PCDHA12-201ENST00000398631 CHD5Q8TDI0 1954 aa13.59□□□□□ -0.23
PCDHA12-201ENST00000398631 MYO7BQ6PIF6 2116 aa13.59□□□□□ -0.23
PCDHA12-201ENST00000398631 EGR1P18146 543 aa13.59□□□□□ -0.23
PCDHA12-201ENST00000398631 DDTP30046 118 aa13.59□□□□□ -0.23
PCDHA12-201ENST00000398631 SRIP30626 198 aa13.59□□□□□ -0.23
PCDHA12-201ENST00000398631 NPFFR1Q9GZQ6 430 aa13.59□□□□□ -0.23
PCDHA12-201ENST00000398631 GREB1Q4ZG55 1949 aa13.59□□□□□ -0.23
PCDHA12-201ENST00000398631 NBR2O15453 112 aa13.59□□□□□ -0.23
PCDHA12-201ENST00000398631 CEACAM4O75871 244 aa13.59□□□□□ -0.23
PCDHA12-201ENST00000398631 SFRP2Q96HF1 295 aa13.59□□□□□ -0.23
PCDHA12-201ENST00000398631 CREBBPQ92793 2442 aa13.59□□□□□ -0.23
PCDHA12-201ENST00000398631 TMEM238LA0A1B0GVL6 79 aa13.58□□□□□ -0.23
PCDHA12-201ENST00000398631 A6NJY4 79 aa13.58□□□□□ -0.23
PCDHA12-201ENST00000398631 TCTAP57738 103 aa13.58□□□□□ -0.23
PCDHA12-201ENST00000398631 TEX45Q8NA69 505 aa13.58□□□□□ -0.23
PCDHA12-201ENST00000398631 ZNF506Q5JVG8 444 aa13.58□□□□□ -0.24
PCDHA12-201ENST00000398631 PAPPA-AS1Q5QFB9 102 aa13.58□□□□□ -0.24
PCDHA12-201ENST00000398631 LYZL4Q96KX0 146 aa13.58□□□□□ -0.24
PCDHA12-201ENST00000398631 DMRT1Q9Y5R6 373 aa13.58□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms