RNA–Protein interactions for RNA: ENST00000395860.6

VCPKMT-202, Transcript of valosin containing protein lysine methyltransferase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VCPKMT, Length 1,761 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCPKMT-202ENST00000395860 DEFB112Q30KQ8 113 aa16.27■□□□□ 0.2
VCPKMT-202ENST00000395860 C9orf139Q6ZV77 190 aa16.27■□□□□ 0.2
VCPKMT-202ENST00000395860 ZANQ9Y493 2812 aa16.27■□□□□ 0.19
VCPKMT-202ENST00000395860 CST7O76096 145 aa16.26■□□□□ 0.19
VCPKMT-202ENST00000395860 COMPP49747 757 aaPredicted RBP16.26■□□□□ 0.19
VCPKMT-202ENST00000395860 SULT1A1P50225 295 aa16.26■□□□□ 0.19
VCPKMT-202ENST00000395860 BAXQ07812 192 aa16.26■□□□□ 0.19
VCPKMT-202ENST00000395860 AANATQ16613 207 aa16.26■□□□□ 0.19
VCPKMT-202ENST00000395860 OR4C12Q96R67 309 aa16.26■□□□□ 0.19
VCPKMT-202ENST00000395860 SMIM3Q9BZL3 60 aa16.26■□□□□ 0.19
VCPKMT-202ENST00000395860 YAE1D1Q9NRH1 226 aa16.26■□□□□ 0.19
VCPKMT-202ENST00000395860 SVEP1Q4LDE5 3571 aa16.26■□□□□ 0.19
VCPKMT-202ENST00000395860 A0A1W2PN81 502 aa16.26■□□□□ 0.19
VCPKMT-202ENST00000395860 CNIH1O95406 144 aa16.26■□□□□ 0.19
VCPKMT-202ENST00000395860 IFNA10P01566 189 aa16.26■□□□□ 0.19
VCPKMT-202ENST00000395860 METTL15P1P0C7V9 234 aa16.26■□□□□ 0.19
VCPKMT-202ENST00000395860 CHRNA7P36544 502 aa16.26■□□□□ 0.19
VCPKMT-202ENST00000395860 Q8N9W7 124 aa16.26■□□□□ 0.19
VCPKMT-202ENST00000395860 OR10W1Q8NGF6 305 aa16.26■□□□□ 0.19
VCPKMT-202ENST00000395860 BSCL2Q96G97 398 aaPredicted RBP16.26■□□□□ 0.19
VCPKMT-202ENST00000395860 SLC25A33Q9BSK2 321 aa16.26■□□□□ 0.19
VCPKMT-202ENST00000395860 FBXL17Q9UF56 701 aa16.26■□□□□ 0.19
VCPKMT-202ENST00000395860 PLXNB1O43157 2135 aa16.25■□□□□ 0.19
VCPKMT-202ENST00000395860 CGB1A6NKQ9 187 aa16.25■□□□□ 0.19
VCPKMT-202ENST00000395860 TMEM14EPQ6UXP3 125 aa16.25■□□□□ 0.19
VCPKMT-202ENST00000395860 TMEM219Q86XT9 240 aa16.25■□□□□ 0.19
VCPKMT-202ENST00000395860 TMEM217Q8N7C4 229 aa16.25■□□□□ 0.19
VCPKMT-202ENST00000395860 RBM14Q96PK6 669 aaKnown RBP16.25■□□□□ 0.19
VCPKMT-202ENST00000395860 RASL11BQ9BPW5 248 aa16.25■□□□□ 0.19
VCPKMT-202ENST00000395860 U3KQ87 197 aa16.25■□□□□ 0.19
VCPKMT-202ENST00000395860 ZNF469Q96JG9 3925 aaPredicted RBP16.24■□□□□ 0.19
VCPKMT-202ENST00000395860 FLNAP21333 2647 aaKnown RBP16.24■□□□□ 0.19
VCPKMT-202ENST00000395860 AKAP9Q99996 3911 aa16.24■□□□□ 0.19
VCPKMT-202ENST00000395860 TAAR5O14804 337 aa16.24■□□□□ 0.19
VCPKMT-202ENST00000395860 ERHP84090 104 aaKnown RBP16.24■□□□□ 0.19
VCPKMT-202ENST00000395860 LY6EQ16553 131 aa16.24■□□□□ 0.19
VCPKMT-202ENST00000395860 SPNS3Q6ZMD2 512 aa16.24■□□□□ 0.19
VCPKMT-202ENST00000395860 IL17RELQ6ZVW7 336 aa16.24■□□□□ 0.19
VCPKMT-202ENST00000395860 SLC24A4Q8NFF2 622 aa16.24■□□□□ 0.19
VCPKMT-202ENST00000395860 SRSF12Q8WXF0 261 aaKnown RBP16.24■□□□□ 0.19
VCPKMT-202ENST00000395860 ZNF471Q9BX82 626 aaPredicted RBP16.24■□□□□ 0.19
VCPKMT-202ENST00000395860 TEX15Q9BXT5 2789 aa16.24■□□□□ 0.19
VCPKMT-202ENST00000395860 GON7Q9BXV9 100 aa16.24■□□□□ 0.19
VCPKMT-202ENST00000395860 A0A1B0GW64 132 aa16.23■□□□□ 0.19
VCPKMT-202ENST00000395860 SSBP2P81877 361 aaPredicted RBP16.23■□□□□ 0.19
VCPKMT-202ENST00000395860 MRPL41Q8IXM3 137 aaKnown RBP16.23■□□□□ 0.19
VCPKMT-202ENST00000395860 MOB4Q9Y3A3 225 aa16.23■□□□□ 0.19
VCPKMT-202ENST00000395860 CSPG4Q6UVK1 2322 aa16.23■□□□□ 0.19
VCPKMT-202ENST00000395860 C15orf62A8K5M9 175 aa16.23■□□□□ 0.19
VCPKMT-202ENST00000395860 FXYD3Q14802 87 aa16.23■□□□□ 0.19
VCPKMT-202ENST00000395860 OR8G2PQ6IF36 304 aa16.23■□□□□ 0.19
VCPKMT-202ENST00000395860 SLC51BQ86UW2 128 aa16.23■□□□□ 0.19
VCPKMT-202ENST00000395860 OR1S2Q8NGQ3 325 aa16.23■□□□□ 0.19
VCPKMT-202ENST00000395860 OR5C1Q8NGR4 320 aa16.23■□□□□ 0.19
VCPKMT-202ENST00000395860 PITPNC1Q9UKF7 332 aa16.23■□□□□ 0.19
VCPKMT-202ENST00000395860 INS-IGF2F8WCM5 200 aa16.22■□□□□ 0.19
VCPKMT-202ENST00000395860 OR8U8P0C7N1 319 aa16.22■□□□□ 0.19
VCPKMT-202ENST00000395860 NPY1RP25929 384 aa16.22■□□□□ 0.19
VCPKMT-202ENST00000395860 SNCAP37840 140 aa16.22■□□□□ 0.19
VCPKMT-202ENST00000395860 HTR2BP41595 481 aa16.22■□□□□ 0.19
VCPKMT-202ENST00000395860 HBG1P69891 147 aa16.22■□□□□ 0.19
VCPKMT-202ENST00000395860 HBG2P69892 147 aa16.22■□□□□ 0.19
VCPKMT-202ENST00000395860 SLA2Q9H6Q3 261 aa16.22■□□□□ 0.19
VCPKMT-202ENST00000395860 A6NDX4 124 aa16.21■□□□□ 0.19
VCPKMT-202ENST00000395860 OR13C7P0DN81 318 aa16.21■□□□□ 0.19
VCPKMT-202ENST00000395860 SRP14P37108 136 aaKnown RBP16.21■□□□□ 0.19
VCPKMT-202ENST00000395860 RAB11AP62491 216 aa16.21■□□□□ 0.19
VCPKMT-202ENST00000395860 WT1-ASQ06250 92 aa16.21■□□□□ 0.19
VCPKMT-202ENST00000395860 CLINT1Q14677 625 aa16.21■□□□□ 0.19
VCPKMT-202ENST00000395860 ZNF562Q6V9R5 426 aa16.21■□□□□ 0.19
VCPKMT-202ENST00000395860 HAPLN4Q86UW8 402 aa16.21■□□□□ 0.19
VCPKMT-202ENST00000395860 C5orf56Q8N8D9 126 aa16.21■□□□□ 0.19
VCPKMT-202ENST00000395860 CYTL1Q9NRR1 136 aa16.21■□□□□ 0.19
VCPKMT-202ENST00000395860 FGF16O43320 207 aa16.21■□□□□ 0.18
VCPKMT-202ENST00000395860 HLA-DRB1P01911 266 aa16.21■□□□□ 0.18
VCPKMT-202ENST00000395860 IER3P46695 156 aa16.21■□□□□ 0.18
VCPKMT-202ENST00000395860 CX3CL1P78423 397 aa16.21■□□□□ 0.18
VCPKMT-202ENST00000395860 IFITM2Q01629 132 aa16.21■□□□□ 0.18
VCPKMT-202ENST00000395860 ARL16Q0P5N6 197 aa16.21■□□□□ 0.18
VCPKMT-202ENST00000395860 OR10P1Q8NGE3 313 aa16.21■□□□□ 0.18
VCPKMT-202ENST00000395860 MYO9AB2RTY4 2548 aa16.2■□□□□ 0.18
VCPKMT-202ENST00000395860 IGLC7A0M8Q6 106 aa16.2■□□□□ 0.18
VCPKMT-202ENST00000395860 PMS2P5A8MQ11 134 aa16.2■□□□□ 0.18
VCPKMT-202ENST00000395860 SCAF4O95104 1147 aaKnown RBP16.2■□□□□ 0.18
VCPKMT-202ENST00000395860 APELAP0DMC3 54 aa16.2■□□□□ 0.18
VCPKMT-202ENST00000395860 HNF1AP20823 631 aa16.2■□□□□ 0.18
VCPKMT-202ENST00000395860 Q6YL49 198 aa16.2■□□□□ 0.18
VCPKMT-202ENST00000395860 STPG2Q8N412 459 aa16.2■□□□□ 0.18
VCPKMT-202ENST00000395860 LILRB2Q8N423 598 aa16.2■□□□□ 0.18
VCPKMT-202ENST00000395860 ABHD5Q8WTS1 349 aa16.2■□□□□ 0.18
VCPKMT-202ENST00000395860 SSMEM1Q8WWF3 244 aa16.2■□□□□ 0.18
VCPKMT-202ENST00000395860 ARPC1AQ92747 370 aa16.2■□□□□ 0.18
VCPKMT-202ENST00000395860 WFDC1Q9HC57 220 aa16.2■□□□□ 0.18
VCPKMT-202ENST00000395860 BTBD17A6NE02 478 aa16.19■□□□□ 0.18
VCPKMT-202ENST00000395860 TEX22C9J3V5 150 aa16.19■□□□□ 0.18
VCPKMT-202ENST00000395860 IGHV4-59P01825 116 aa16.19■□□□□ 0.18
VCPKMT-202ENST00000395860 IFNA4P05014 189 aa16.19■□□□□ 0.18
VCPKMT-202ENST00000395860 UBA52P62987 128 aaKnown RBP16.19■□□□□ 0.18
VCPKMT-202ENST00000395860 SLC38A11Q08AI6 406 aa16.19■□□□□ 0.18
VCPKMT-202ENST00000395860 RPL7L1Q6DKI1 246 aaKnown RBP16.19■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms