RNA–Protein interactions for RNA: ENST00000395454.6

SCAF11-204, Transcript of SR-related CTD associated factor 11, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SCAF11, Length 1,931 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-204ENST00000395454 RAB13P51153 203 aa12.18□□□□□ -0.46
SCAF11-204ENST00000395454 HLA-DRB5Q30154 266 aa12.18□□□□□ -0.46
SCAF11-204ENST00000395454 SPINK9Q5DT21 86 aa12.18□□□□□ -0.46
SCAF11-204ENST00000395454 SLC25A24Q6NUK1 477 aa12.18□□□□□ -0.46
SCAF11-204ENST00000395454 OR4C13Q8NGP0 309 aa12.18□□□□□ -0.46
SCAF11-204ENST00000395454 OR4A5Q8NH83 315 aa12.18□□□□□ -0.46
SCAF11-204ENST00000395454 TMEM170AQ8WVE7 144 aa12.18□□□□□ -0.46
SCAF11-204ENST00000395454 CLCC1Q96S66 551 aa12.18□□□□□ -0.46
SCAF11-204ENST00000395454 RSG1Q9BU20 258 aa12.18□□□□□ -0.46
SCAF11-204ENST00000395454 SMDT1Q9H4I9 107 aa12.18□□□□□ -0.46
SCAF11-204ENST00000395454 UBE2L5PA0A1B0GUS4 154 aa12.17□□□□□ -0.46
SCAF11-204ENST00000395454 hCG_1809904A0A1W2PP81 198 aa12.17□□□□□ -0.46
SCAF11-204ENST00000395454 A0A1W2PPE2 198 aa12.17□□□□□ -0.46
SCAF11-204ENST00000395454 A0A1W2PR64 198 aa12.17□□□□□ -0.46
SCAF11-204ENST00000395454 A0A1W2PRV1 198 aa12.17□□□□□ -0.46
SCAF11-204ENST00000395454 INS-IGF2F8WCM5 200 aa12.17□□□□□ -0.46
SCAF11-204ENST00000395454 KBTBD11O94819 623 aa12.17□□□□□ -0.46
SCAF11-204ENST00000395454 SAA1P0DJI8 122 aaPredicted RBP12.17□□□□□ -0.46
SCAF11-204ENST00000395454 GATA3P23771 443 aa12.17□□□□□ -0.46
SCAF11-204ENST00000395454 MC5RP33032 325 aa12.17□□□□□ -0.46
SCAF11-204ENST00000395454 DLX1P56177 255 aa12.17□□□□□ -0.46
SCAF11-204ENST00000395454 ATP5IP56385 69 aaPredicted RBP12.17□□□□□ -0.46
SCAF11-204ENST00000395454 PRCDQ00LT1 54 aa12.17□□□□□ -0.46
SCAF11-204ENST00000395454 AKR1C1Q04828 323 aa12.17□□□□□ -0.46
SCAF11-204ENST00000395454 TGIF2LXQ8IUE1 241 aa12.17□□□□□ -0.46
SCAF11-204ENST00000395454 OR5B3Q8NH48 314 aa12.17□□□□□ -0.46
SCAF11-204ENST00000395454 NARS2Q96I59 477 aaKnown RBP12.17□□□□□ -0.46
SCAF11-204ENST00000395454 SMR3AQ99954 134 aa12.17□□□□□ -0.46
SCAF11-204ENST00000395454 C7orf69Q9H7B7 122 aa12.17□□□□□ -0.46
SCAF11-204ENST00000395454 SIRT7Q9NRC8 400 aa12.17□□□□□ -0.46
SCAF11-204ENST00000395454 FKBP11Q9NYL4 201 aa12.17□□□□□ -0.46
SCAF11-204ENST00000395454 WASHC3Q9Y3C0 194 aa12.17□□□□□ -0.46
SCAF11-204ENST00000395454 FAM96BQ9Y3D0 163 aa12.17□□□□□ -0.46
SCAF11-204ENST00000395454 KPTNQ9Y664 436 aa12.17□□□□□ -0.46
SCAF11-204ENST00000395454 M0R1W7 72 aa12.17□□□□□ -0.46
SCAF11-204ENST00000395454 TOX4O94842 621 aa12.17□□□□□ -0.46
SCAF11-204ENST00000395454 APOC3P02656 99 aa12.17□□□□□ -0.46
SCAF11-204ENST00000395454 PRB3Q04118 309 aaPredicted RBP12.17□□□□□ -0.46
SCAF11-204ENST00000395454 PAX8Q06710 450 aa12.17□□□□□ -0.46
SCAF11-204ENST00000395454 DIAPH2-AS1Q14236 149 aa12.17□□□□□ -0.46
SCAF11-204ENST00000395454 BSXQ3C1V8 233 aa12.17□□□□□ -0.46
SCAF11-204ENST00000395454 MBD3L1Q8WWY6 194 aa12.17□□□□□ -0.46
SCAF11-204ENST00000395454 LHX4Q969G2 390 aa12.17□□□□□ -0.46
SCAF11-204ENST00000395454 FLYWCH2Q96CP2 140 aaKnown RBP12.17□□□□□ -0.46
SCAF11-204ENST00000395454 HARBI1Q96MB7 349 aa12.17□□□□□ -0.46
SCAF11-204ENST00000395454 TMUB1Q9BVT8 246 aa12.17□□□□□ -0.46
SCAF11-204ENST00000395454 CLEC7AQ9BXN2 247 aa12.17□□□□□ -0.46
SCAF11-204ENST00000395454 HEYLQ9NQ87 328 aaPredicted RBP12.17□□□□□ -0.46
SCAF11-204ENST00000395454 RPRMQ9NS64 109 aa12.17□□□□□ -0.46
SCAF11-204ENST00000395454 KIAA1456Q9P272 454 aa12.17□□□□□ -0.46
SCAF11-204ENST00000395454 WDR83OSQ9Y284 106 aa12.17□□□□□ -0.46
SCAF11-204ENST00000395454 FBXO7Q9Y3I1 522 aa12.17□□□□□ -0.46
SCAF11-204ENST00000395454 C9JQL5 133 aa12.16□□□□□ -0.46
SCAF11-204ENST00000395454 SOX15O60248 233 aa12.16□□□□□ -0.46
SCAF11-204ENST00000395454 SCO1O75880 301 aa12.16□□□□□ -0.46
SCAF11-204ENST00000395454 F8P00451 2351 aa12.16□□□□□ -0.46
SCAF11-204ENST00000395454 IGLV2-23P01705 113 aa12.16□□□□□ -0.46
SCAF11-204ENST00000395454 H2AFB1P0C5Y9 115 aa12.16□□□□□ -0.46
SCAF11-204ENST00000395454 SONP18583 2426 aaKnown RBP12.16□□□□□ -0.46
SCAF11-204ENST00000395454 PRRX1P54821 245 aa12.16□□□□□ -0.46
SCAF11-204ENST00000395454 GUK1Q16774 197 aa12.16□□□□□ -0.46
SCAF11-204ENST00000395454 VMO1Q7Z5L0 202 aa12.16□□□□□ -0.46
SCAF11-204ENST00000395454 KIR3DL3Q8N743 410 aa12.16□□□□□ -0.46
SCAF11-204ENST00000395454 Q8N7P7 452 aa12.16□□□□□ -0.46
SCAF11-204ENST00000395454 TMEM167AQ8TBQ9 72 aa12.16□□□□□ -0.46
SCAF11-204ENST00000395454 TREM1Q9NP99 234 aa12.16□□□□□ -0.46
SCAF11-204ENST00000395454 OR51B2Q9Y5P1 312 aa12.16□□□□□ -0.46
SCAF11-204ENST00000395454 RRHO14718 337 aa12.15□□□□□ -0.46
SCAF11-204ENST00000395454 AGPAT2O15120 278 aa12.15□□□□□ -0.46
SCAF11-204ENST00000395454 HBE1P02100 147 aa12.15□□□□□ -0.46
SCAF11-204ENST00000395454 HOXA1P49639 335 aaPredicted RBP12.15□□□□□ -0.46
SCAF11-204ENST00000395454 DLK1P80370 383 aa12.15□□□□□ -0.46
SCAF11-204ENST00000395454 KRTAP1-1Q07627 177 aa12.15□□□□□ -0.46
SCAF11-204ENST00000395454 TMEM41BQ5BJD5 291 aa12.15□□□□□ -0.46
SCAF11-204ENST00000395454 VSTM2AQ8TAG5 236 aa12.15□□□□□ -0.46
SCAF11-204ENST00000395454 SIRPDQ9H106 197 aa12.15□□□□□ -0.46
SCAF11-204ENST00000395454 TMEM231Q9H6L2 316 aa12.15□□□□□ -0.46
SCAF11-204ENST00000395454 FNDC10F2Z333 226 aa12.15□□□□□ -0.46
SCAF11-204ENST00000395454 LY6LH3BQJ8 138 aa12.15□□□□□ -0.46
SCAF11-204ENST00000395454 BUB1B-PAK6H3BSN5 160 aa12.15□□□□□ -0.46
SCAF11-204ENST00000395454 CD5LO43866 347 aa12.15□□□□□ -0.46
SCAF11-204ENST00000395454 MPDU1O75352 247 aa12.15□□□□□ -0.46
SCAF11-204ENST00000395454 REG1BP48304 166 aa12.15□□□□□ -0.46
SCAF11-204ENST00000395454 PMS2P11Q13670 270 aa12.15□□□□□ -0.46
SCAF11-204ENST00000395454 PEA15Q15121 130 aa12.15□□□□□ -0.46
SCAF11-204ENST00000395454 SVBPQ8N300 66 aa12.15□□□□□ -0.46
SCAF11-204ENST00000395454 SLC24A4Q8NFF2 622 aa12.15□□□□□ -0.46
SCAF11-204ENST00000395454 OR4P4Q8NGL7 312 aa12.15□□□□□ -0.46
SCAF11-204ENST00000395454 RBMXL1Q96E39 390 aaKnown RBP12.15□□□□□ -0.46
SCAF11-204ENST00000395454 PBDC1Q9BVG4 233 aa12.15□□□□□ -0.46
SCAF11-204ENST00000395454 NPCDR1Q9BY65 106 aa12.15□□□□□ -0.46
SCAF11-204ENST00000395454 H7C2Y5 167 aa12.14□□□□□ -0.47
SCAF11-204ENST00000395454 IFNA10P01566 189 aa12.14□□□□□ -0.47
SCAF11-204ENST00000395454 SFTA3P0C7M3 94 aa12.14□□□□□ -0.47
SCAF11-204ENST00000395454 ZNF726P1Q15940 193 aa12.14□□□□□ -0.47
SCAF11-204ENST00000395454 ETV3LQ6ZN32 361 aa12.14□□□□□ -0.47
SCAF11-204ENST00000395454 C1orf122Q6ZSJ8 110 aa12.14□□□□□ -0.47
SCAF11-204ENST00000395454 OR11H6Q8NGC7 330 aa12.14□□□□□ -0.47
SCAF11-204ENST00000395454 MS4A7Q9GZW8 240 aaPredicted RBP12.14□□□□□ -0.47
SCAF11-204ENST00000395454 AMMECR1Q9Y4X0 333 aaPredicted RBP12.14□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 49.3 ms